Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RFT1Q96AA3 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RFT1Q96AA3 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RFT1Q96AA3 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RFT1Q96AA3 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.89□□□□□ -1.63
RFT1Q96AA3 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.89□□□□□ -1.63
RFT1Q96AA3 RBPJP2-201ENST00000618187 1444 ntBASIC4.89□□□□□ -1.63
RFT1Q96AA3 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.88□□□□□ -1.63
RFT1Q96AA3 KARSP1-201ENST00000451871 1752 ntBASIC4.88□□□□□ -1.63
RFT1Q96AA3 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
RFT1Q96AA3 AL359715.3-201ENST00000569267 2123 ntBASIC4.88□□□□□ -1.63
RFT1Q96AA3 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RFT1Q96AA3 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RFT1Q96AA3 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RFT1Q96AA3 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
RFT1Q96AA3 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RFT1Q96AA3 MT-RNR2-201ENST00000387347 1559 ntBASIC4.88□□□□□ -1.63
RFT1Q96AA3 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC4.88□□□□□ -1.63
RFT1Q96AA3 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.88□□□□□ -1.63
RFT1Q96AA3 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
RFT1Q96AA3 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC4.88□□□□□ -1.63
RFT1Q96AA3 COX6B1P3-201ENST00000312310 260 ntBASIC4.88□□□□□ -1.63
RFT1Q96AA3 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RFT1Q96AA3 AC007618.1-201ENST00000366455 732 ntBASIC4.88□□□□□ -1.63
RFT1Q96AA3 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RFT1Q96AA3 RPL21P67-201ENST00000402896 478 ntBASIC4.88□□□□□ -1.63
RFT1Q96AA3 RN7SKP286-201ENST00000410894 299 ntBASIC4.88□□□□□ -1.63
RFT1Q96AA3 RPS6P23-201ENST00000413224 722 ntBASIC4.88□□□□□ -1.63
RFT1Q96AA3 OR51A6P-201ENST00000418680 1004 ntBASIC4.88□□□□□ -1.63
RFT1Q96AA3 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC4.88□□□□□ -1.63
RFT1Q96AA3 BTF3P9-201ENST00000418784 283 ntBASIC4.88□□□□□ -1.63
RFT1Q96AA3 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC4.88□□□□□ -1.63
RFT1Q96AA3 EIF5AP4-201ENST00000441206 465 ntBASIC4.88□□□□□ -1.63
RFT1Q96AA3 HSPE1P22-201ENST00000456856 327 ntBASIC4.88□□□□□ -1.63
RFT1Q96AA3 NXT1P1-201ENST00000458481 316 ntBASIC4.88□□□□□ -1.63
RFT1Q96AA3 AC021660.1-201ENST00000465006 554 ntBASIC4.88□□□□□ -1.63
RFT1Q96AA3 RN7SL193P-201ENST00000491708 276 ntBASIC4.88□□□□□ -1.63
RFT1Q96AA3 AC091874.2-201ENST00000505889 720 ntBASIC4.88□□□□□ -1.63
RFT1Q96AA3 AC016559.2-201ENST00000510759 359 ntBASIC4.88□□□□□ -1.63
RFT1Q96AA3 HMGB1P47-201ENST00000511281 589 ntBASIC4.88□□□□□ -1.63
RFT1Q96AA3 HSD3BP3-201ENST00000514706 994 ntBASIC4.88□□□□□ -1.63
RFT1Q96AA3 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RFT1Q96AA3 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.88□□□□□ -1.63
RFT1Q96AA3 AC109635.6-201ENST00000525487 1113 ntBASIC4.88□□□□□ -1.63
RFT1Q96AA3 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC4.88□□□□□ -1.63
RFT1Q96AA3 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC4.88□□□□□ -1.63
RFT1Q96AA3 AC096996.1-201ENST00000563813 325 ntBASIC4.88□□□□□ -1.63
RFT1Q96AA3 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC4.88□□□□□ -1.63
RFT1Q96AA3 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC4.88□□□□□ -1.63
RFT1Q96AA3 PRPF19P1-201ENST00000584766 898 ntBASIC4.88□□□□□ -1.63
RFT1Q96AA3 AC090236.2-201ENST00000587933 1101 ntBASIC4.88□□□□□ -1.63
RFT1Q96AA3 AC135803.1-201ENST00000608748 565 ntBASIC4.88□□□□□ -1.63
RFT1Q96AA3 WBP1LP8-201ENST00000617401 327 ntBASIC4.88□□□□□ -1.63
RFT1Q96AA3 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RFT1Q96AA3 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.88□□□□□ -1.63
RFT1Q96AA3 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
RFT1Q96AA3 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC4.88□□□□□ -1.63
RFT1Q96AA3 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
RFT1Q96AA3 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.88□□□□□ -1.63
RFT1Q96AA3 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
RFT1Q96AA3 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
RFT1Q96AA3 PDZK1P1-202ENST00000425209 1350 ntBASIC4.88□□□□□ -1.63
RFT1Q96AA3 TRIM51GP-201ENST00000534741 1350 ntBASIC4.88□□□□□ -1.63
RFT1Q96AA3 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.88□□□□□ -1.63
RFT1Q96AA3 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
RFT1Q96AA3 AC104966.1-201ENST00000467010 1464 ntBASIC4.88□□□□□ -1.63
RFT1Q96AA3 AC007342.7-201ENST00000624610 2337 ntBASIC4.88□□□□□ -1.63
RFT1Q96AA3 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.87□□□□□ -1.63
RFT1Q96AA3 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RFT1Q96AA3 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RFT1Q96AA3 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RFT1Q96AA3 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RFT1Q96AA3 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RFT1Q96AA3 RNA5SP500-201ENST00000364486 119 ntBASIC4.87□□□□□ -1.63
RFT1Q96AA3 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC4.87□□□□□ -1.63
RFT1Q96AA3 CCNB2P1-201ENST00000399411 1150 ntBASIC4.87□□□□□ -1.63
RFT1Q96AA3 OR1F12-201ENST00000402365 945 ntBASIC4.87□□□□□ -1.63
RFT1Q96AA3 GSTA12P-201ENST00000402398 508 ntBASIC4.87□□□□□ -1.63
RFT1Q96AA3 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC4.87□□□□□ -1.63
RFT1Q96AA3 COX5BP7-201ENST00000414780 274 ntBASIC4.87□□□□□ -1.63
RFT1Q96AA3 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC4.87□□□□□ -1.63
RFT1Q96AA3 NIFKP3-201ENST00000417799 865 ntBASIC4.87□□□□□ -1.63
RFT1Q96AA3 RPL7AP49-201ENST00000429522 581 ntBASIC4.87□□□□□ -1.63
RFT1Q96AA3 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC4.87□□□□□ -1.63
RFT1Q96AA3 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RFT1Q96AA3 AL591438.1-201ENST00000433508 581 ntBASIC4.87□□□□□ -1.63
RFT1Q96AA3 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
RFT1Q96AA3 TMX2P1-201ENST00000436507 708 ntBASIC4.87□□□□□ -1.63
RFT1Q96AA3 PA2G4P6-201ENST00000438325 1197 ntBASIC4.87□□□□□ -1.63
RFT1Q96AA3 AMYP1-201ENST00000440059 1023 ntBASIC4.87□□□□□ -1.63
RFT1Q96AA3 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC4.87□□□□□ -1.63
RFT1Q96AA3 TIMM8BP2-201ENST00000445940 251 ntBASIC4.87□□□□□ -1.63
RFT1Q96AA3 RPL7L1P1-201ENST00000448259 785 ntBASIC4.87□□□□□ -1.63
RFT1Q96AA3 AL627224.1-201ENST00000448334 444 ntBASIC4.87□□□□□ -1.63
RFT1Q96AA3 PRPF38AP1-201ENST00000451976 933 ntBASIC4.87□□□□□ -1.63
RFT1Q96AA3 PPIAP27-201ENST00000453800 265 ntBASIC4.87□□□□□ -1.63
RFT1Q96AA3 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC4.87□□□□□ -1.63
RFT1Q96AA3 AC089999.1-201ENST00000460336 374 ntBASIC4.87□□□□□ -1.63
RFT1Q96AA3 AC068228.1-201ENST00000461723 211 ntBASIC4.87□□□□□ -1.63
RFT1Q96AA3 AC090543.1-201ENST00000492168 485 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms