Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 AC074367.1-201ENST00000438685 1125 ntBASIC5.44□□□□□ -1.54
SLC44A1Q8WWI5 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.44□□□□□ -1.54
SLC44A1Q8WWI5 VDAC2P4-201ENST00000452925 711 ntBASIC5.44□□□□□ -1.54
SLC44A1Q8WWI5 AC084754.1-201ENST00000463466 464 ntBASIC5.44□□□□□ -1.54
SLC44A1Q8WWI5 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.44□□□□□ -1.54
SLC44A1Q8WWI5 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
SLC44A1Q8WWI5 MYL12BP2-201ENST00000503948 512 ntBASIC5.44□□□□□ -1.54
SLC44A1Q8WWI5 SUMO2P4-201ENST00000504193 276 ntBASIC5.44□□□□□ -1.54
SLC44A1Q8WWI5 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SLC44A1Q8WWI5 SNORA70.20-201ENST00000516848 126 ntBASIC5.44□□□□□ -1.54
SLC44A1Q8WWI5 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.44□□□□□ -1.54
SLC44A1Q8WWI5 AC060775.1-201ENST00000518241 520 ntBASIC5.44□□□□□ -1.54
SLC44A1Q8WWI5 SEC11B-201ENST00000518383 499 ntBASIC5.44□□□□□ -1.54
SLC44A1Q8WWI5 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.44□□□□□ -1.54
SLC44A1Q8WWI5 AC074029.2-201ENST00000551045 634 ntBASIC5.44□□□□□ -1.54
SLC44A1Q8WWI5 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.44□□□□□ -1.54
SLC44A1Q8WWI5 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.44□□□□□ -1.54
SLC44A1Q8WWI5 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.44□□□□□ -1.54
SLC44A1Q8WWI5 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SLC44A1Q8WWI5 AC127024.5-201ENST00000580085 462 ntBASIC5.44□□□□□ -1.54
SLC44A1Q8WWI5 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
SLC44A1Q8WWI5 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.44□□□□□ -1.54
SLC44A1Q8WWI5 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.44□□□□□ -1.54
SLC44A1Q8WWI5 MIR6839-201ENST00000620425 113 ntBASIC5.44□□□□□ -1.54
SLC44A1Q8WWI5 AC129778.1-202ENST00000623812 261 ntBASIC5.44□□□□□ -1.54
SLC44A1Q8WWI5 AP003400.3-201ENST00000624904 346 ntBASIC5.44□□□□□ -1.54
SLC44A1Q8WWI5 AL591379.1-207ENST00000635982 261 ntBASIC5.44□□□□□ -1.54
SLC44A1Q8WWI5 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.44□□□□□ -1.54
SLC44A1Q8WWI5 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
SLC44A1Q8WWI5 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
SLC44A1Q8WWI5 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.44□□□□□ -1.54
SLC44A1Q8WWI5 CR382285.2-201ENST00000624662 1495 ntBASIC5.44□□□□□ -1.54
SLC44A1Q8WWI5 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.44□□□□□ -1.54
SLC44A1Q8WWI5 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SLC44A1Q8WWI5 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.44□□□□□ -1.54
SLC44A1Q8WWI5 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
SLC44A1Q8WWI5 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
SLC44A1Q8WWI5 NEPNP-201ENST00000404786 1371 ntBASIC5.43□□□□□ -1.54
SLC44A1Q8WWI5 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SLC44A1Q8WWI5 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SLC44A1Q8WWI5 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.43□□□□□ -1.54
SLC44A1Q8WWI5 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.43□□□□□ -1.54
SLC44A1Q8WWI5 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.43□□□□□ -1.54
SLC44A1Q8WWI5 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SLC44A1Q8WWI5 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.43□□□□□ -1.54
SLC44A1Q8WWI5 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
SLC44A1Q8WWI5 OR9G4-201ENST00000302957 984 ntBASIC5.43□□□□□ -1.54
SLC44A1Q8WWI5 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
SLC44A1Q8WWI5 MIR365B-201ENST00000362317 111 ntBASIC5.43□□□□□ -1.54
SLC44A1Q8WWI5 RNU1-19P-201ENST00000363306 165 ntBASIC5.43□□□□□ -1.54
SLC44A1Q8WWI5 RN7SKP6-201ENST00000364795 319 ntBASIC5.43□□□□□ -1.54
SLC44A1Q8WWI5 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.43□□□□□ -1.54
SLC44A1Q8WWI5 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
SLC44A1Q8WWI5 RPL21P67-201ENST00000402896 478 ntBASIC5.43□□□□□ -1.54
SLC44A1Q8WWI5 AL356968.2-201ENST00000412769 1257 ntBASIC5.43□□□□□ -1.54
SLC44A1Q8WWI5 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.43□□□□□ -1.54
SLC44A1Q8WWI5 ARAFP1-201ENST00000422172 605 ntBASIC5.43□□□□□ -1.54
SLC44A1Q8WWI5 AC113412.1-201ENST00000425840 504 ntBASIC5.43□□□□□ -1.54
SLC44A1Q8WWI5 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC5.43□□□□□ -1.54
SLC44A1Q8WWI5 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC5.43□□□□□ -1.54
SLC44A1Q8WWI5 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.43□□□□□ -1.54
SLC44A1Q8WWI5 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
SLC44A1Q8WWI5 CYCSP53-201ENST00000455540 265 ntBASIC5.43□□□□□ -1.54
SLC44A1Q8WWI5 ACA64.1-201ENST00000459171 127 ntBASIC5.43□□□□□ -1.54
SLC44A1Q8WWI5 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC5.43□□□□□ -1.54
SLC44A1Q8WWI5 MTND3P24-201ENST00000506306 329 ntBASIC5.43□□□□□ -1.54
SLC44A1Q8WWI5 RNU6-615P-201ENST00000516065 106 ntBASIC5.43□□□□□ -1.54
SLC44A1Q8WWI5 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC5.43□□□□□ -1.54
SLC44A1Q8WWI5 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.43□□□□□ -1.54
SLC44A1Q8WWI5 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.43□□□□□ -1.54
SLC44A1Q8WWI5 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.43□□□□□ -1.54
SLC44A1Q8WWI5 MTND2P13-201ENST00000577438 1039 ntBASIC5.43□□□□□ -1.54
SLC44A1Q8WWI5 AC026124.2-201ENST00000621847 656 ntBASIC5.43□□□□□ -1.54
SLC44A1Q8WWI5 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.43□□□□□ -1.54
SLC44A1Q8WWI5 AC006453.5-201ENST00000636451 619 ntBASIC5.43□□□□□ -1.54
SLC44A1Q8WWI5 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SLC44A1Q8WWI5 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.43□□□□□ -1.54
SLC44A1Q8WWI5 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
SLC44A1Q8WWI5 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.43□□□□□ -1.54
SLC44A1Q8WWI5 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
SLC44A1Q8WWI5 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SLC44A1Q8WWI5 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.43□□□□□ -1.54
SLC44A1Q8WWI5 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SLC44A1Q8WWI5 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.43□□□□□ -1.54
SLC44A1Q8WWI5 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SLC44A1Q8WWI5 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.42□□□□□ -1.54
SLC44A1Q8WWI5 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.42□□□□□ -1.54
SLC44A1Q8WWI5 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SLC44A1Q8WWI5 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SLC44A1Q8WWI5 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
SLC44A1Q8WWI5 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
SLC44A1Q8WWI5 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.42□□□□□ -1.54
SLC44A1Q8WWI5 RNA5SP510-201ENST00000364697 99 ntBASIC5.42□□□□□ -1.54
SLC44A1Q8WWI5 SNORA27.3-201ENST00000364937 134 ntBASIC5.42□□□□□ -1.54
SLC44A1Q8WWI5 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SLC44A1Q8WWI5 AC007068.1-201ENST00000396690 844 ntBASIC5.42□□□□□ -1.54
SLC44A1Q8WWI5 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.42□□□□□ -1.54
SLC44A1Q8WWI5 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.42□□□□□ -1.54
SLC44A1Q8WWI5 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SLC44A1Q8WWI5 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 142 ms