Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CLHC1Q8NHS4 HSPA8P15-201ENST00000401676 786 ntBASIC5.07□□□□□ -1.6
CLHC1Q8NHS4 BMS1P17-202ENST00000416720 316 ntBASIC5.07□□□□□ -1.6
CLHC1Q8NHS4 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.07□□□□□ -1.6
CLHC1Q8NHS4 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CLHC1Q8NHS4 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.07□□□□□ -1.6
CLHC1Q8NHS4 PCNPP2-201ENST00000441651 455 ntBASIC5.07□□□□□ -1.6
CLHC1Q8NHS4 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.07□□□□□ -1.6
CLHC1Q8NHS4 AC105399.1-202ENST00000447303 205 ntBASIC5.07□□□□□ -1.6
CLHC1Q8NHS4 AC104634.1-201ENST00000452720 462 ntBASIC5.07□□□□□ -1.6
CLHC1Q8NHS4 RANP1-206ENST00000455094 651 ntBASIC5.07□□□□□ -1.6
CLHC1Q8NHS4 AC084754.1-201ENST00000463466 464 ntBASIC5.07□□□□□ -1.6
CLHC1Q8NHS4 MYL12BP2-201ENST00000503948 512 ntBASIC5.07□□□□□ -1.6
CLHC1Q8NHS4 HMGB1P44-201ENST00000508597 572 ntBASIC5.07□□□□□ -1.6
CLHC1Q8NHS4 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.07□□□□□ -1.6
CLHC1Q8NHS4 EIF3KP3-201ENST00000514461 639 ntBASIC5.07□□□□□ -1.6
CLHC1Q8NHS4 RNU6-513P-201ENST00000516104 104 ntBASIC5.07□□□□□ -1.6
CLHC1Q8NHS4 RNU6-943P-201ENST00000516960 98 ntBASIC5.07□□□□□ -1.6
CLHC1Q8NHS4 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.07□□□□□ -1.6
CLHC1Q8NHS4 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.07□□□□□ -1.6
CLHC1Q8NHS4 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.07□□□□□ -1.6
CLHC1Q8NHS4 AC005341.1-201ENST00000571086 708 ntBASIC5.07□□□□□ -1.6
CLHC1Q8NHS4 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CLHC1Q8NHS4 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.07□□□□□ -1.6
CLHC1Q8NHS4 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.07□□□□□ -1.6
CLHC1Q8NHS4 AC000068.2-201ENST00000608816 460 ntBASIC5.07□□□□□ -1.6
CLHC1Q8NHS4 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.07□□□□□ -1.6
CLHC1Q8NHS4 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.07□□□□□ -1.6
CLHC1Q8NHS4 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CLHC1Q8NHS4 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.07□□□□□ -1.6
CLHC1Q8NHS4 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.07□□□□□ -1.6
CLHC1Q8NHS4 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.07□□□□□ -1.6
CLHC1Q8NHS4 RNF19BPY-201ENST00000458209 1550 ntBASIC5.07□□□□□ -1.6
CLHC1Q8NHS4 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.07□□□□□ -1.6
CLHC1Q8NHS4 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.07□□□□□ -1.6
CLHC1Q8NHS4 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.07□□□□□ -1.6
CLHC1Q8NHS4 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
CLHC1Q8NHS4 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.07□□□□□ -1.6
CLHC1Q8NHS4 AC107021.2-201ENST00000567714 2095 ntBASIC5.06□□□□□ -1.6
CLHC1Q8NHS4 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CLHC1Q8NHS4 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.06□□□□□ -1.6
CLHC1Q8NHS4 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
CLHC1Q8NHS4 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.06□□□□□ -1.6
CLHC1Q8NHS4 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.06□□□□□ -1.6
CLHC1Q8NHS4 U3.7-201ENST00000363668 216 ntBASIC5.06□□□□□ -1.6
CLHC1Q8NHS4 RNA5SP234-201ENST00000363916 119 ntBASIC5.06□□□□□ -1.6
CLHC1Q8NHS4 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.06□□□□□ -1.6
CLHC1Q8NHS4 SNORA68.2-201ENST00000391263 128 ntBASIC5.06□□□□□ -1.6
CLHC1Q8NHS4 RPL21P67-201ENST00000402896 478 ntBASIC5.06□□□□□ -1.6
CLHC1Q8NHS4 RN7SKP247-201ENST00000411094 308 ntBASIC5.06□□□□□ -1.6
CLHC1Q8NHS4 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.06□□□□□ -1.6
CLHC1Q8NHS4 KCTD9P1-201ENST00000430462 1167 ntBASIC5.06□□□□□ -1.6
CLHC1Q8NHS4 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC5.06□□□□□ -1.6
CLHC1Q8NHS4 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.06□□□□□ -1.6
CLHC1Q8NHS4 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC5.06□□□□□ -1.6
CLHC1Q8NHS4 CBX1P5-201ENST00000475330 559 ntBASIC5.06□□□□□ -1.6
CLHC1Q8NHS4 RN7SL423P-201ENST00000486202 304 ntBASIC5.06□□□□□ -1.6
CLHC1Q8NHS4 COX6B1P2-201ENST00000489624 230 ntBASIC5.06□□□□□ -1.6
CLHC1Q8NHS4 AC022133.1-201ENST00000490961 571 ntBASIC5.06□□□□□ -1.6
CLHC1Q8NHS4 AC090638.1-201ENST00000498296 909 ntBASIC5.06□□□□□ -1.6
CLHC1Q8NHS4 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.06□□□□□ -1.6
CLHC1Q8NHS4 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.06□□□□□ -1.6
CLHC1Q8NHS4 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.06□□□□□ -1.6
CLHC1Q8NHS4 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.06□□□□□ -1.6
CLHC1Q8NHS4 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.06□□□□□ -1.6
CLHC1Q8NHS4 AP002373.2-201ENST00000541631 1060 ntBASIC5.06□□□□□ -1.6
CLHC1Q8NHS4 LSM3P2-201ENST00000551246 273 ntBASIC5.06□□□□□ -1.6
CLHC1Q8NHS4 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.06□□□□□ -1.6
CLHC1Q8NHS4 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC5.06□□□□□ -1.6
CLHC1Q8NHS4 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC5.06□□□□□ -1.6
CLHC1Q8NHS4 AC011626.1-201ENST00000604710 562 ntBASIC5.06□□□□□ -1.6
CLHC1Q8NHS4 AC067838.1-201ENST00000606064 577 ntBASIC5.06□□□□□ -1.6
CLHC1Q8NHS4 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
CLHC1Q8NHS4 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.06□□□□□ -1.6
CLHC1Q8NHS4 AC063976.2-201ENST00000425667 3556 ntBASIC5.06□□□□□ -1.6
CLHC1Q8NHS4 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.06□□□□□ -1.6
CLHC1Q8NHS4 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CLHC1Q8NHS4 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
CLHC1Q8NHS4 AC027279.1-201ENST00000568885 4284 ntBASIC5.06□□□□□ -1.6
CLHC1Q8NHS4 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLHC1Q8NHS4 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
CLHC1Q8NHS4 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CLHC1Q8NHS4 OR9K1P-201ENST00000326513 941 ntBASIC5.05□□□□□ -1.6
CLHC1Q8NHS4 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLHC1Q8NHS4 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.05□□□□□ -1.6
CLHC1Q8NHS4 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CLHC1Q8NHS4 MIR589-201ENST00000385238 99 ntBASIC5.05□□□□□ -1.6
CLHC1Q8NHS4 SNORA48.4-201ENST00000391089 134 ntBASIC5.05□□□□□ -1.6
CLHC1Q8NHS4 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC5.05□□□□□ -1.6
CLHC1Q8NHS4 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CLHC1Q8NHS4 AC012075.1-201ENST00000436549 580 ntBASIC5.05□□□□□ -1.6
CLHC1Q8NHS4 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.05□□□□□ -1.6
CLHC1Q8NHS4 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.05□□□□□ -1.6
CLHC1Q8NHS4 RN7SL51P-201ENST00000468230 285 ntBASIC5.05□□□□□ -1.6
CLHC1Q8NHS4 RN7SL814P-201ENST00000487715 300 ntBASIC5.05□□□□□ -1.6
CLHC1Q8NHS4 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CLHC1Q8NHS4 AC074087.1-201ENST00000512059 724 ntBASIC5.05□□□□□ -1.6
CLHC1Q8NHS4 AC100784.1-201ENST00000522790 310 ntBASIC5.05□□□□□ -1.6
CLHC1Q8NHS4 BLZF2P-201ENST00000553776 1130 ntBASIC5.05□□□□□ -1.6
CLHC1Q8NHS4 AC135626.1-201ENST00000556983 435 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms