Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.86□□□□□ -1.63
C9orf40Q8IXQ3 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
C9orf40Q8IXQ3 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.86□□□□□ -1.63
C9orf40Q8IXQ3 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.86□□□□□ -1.63
C9orf40Q8IXQ3 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
C9orf40Q8IXQ3 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
C9orf40Q8IXQ3 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
C9orf40Q8IXQ3 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.86□□□□□ -1.63
C9orf40Q8IXQ3 SNORA17.1-201ENST00000362945 126 ntBASIC4.86□□□□□ -1.63
C9orf40Q8IXQ3 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
C9orf40Q8IXQ3 MIR589-201ENST00000385238 99 ntBASIC4.86□□□□□ -1.63
C9orf40Q8IXQ3 AL358178.1-201ENST00000407698 397 ntBASIC4.86□□□□□ -1.63
C9orf40Q8IXQ3 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.86□□□□□ -1.63
C9orf40Q8IXQ3 RPL19P16-201ENST00000433839 588 ntBASIC4.86□□□□□ -1.63
C9orf40Q8IXQ3 AL157385.1-201ENST00000446973 268 ntBASIC4.86□□□□□ -1.63
C9orf40Q8IXQ3 FCF1P7-201ENST00000451185 558 ntBASIC4.86□□□□□ -1.63
C9orf40Q8IXQ3 AL389915.2-201ENST00000454576 441 ntBASIC4.86□□□□□ -1.63
C9orf40Q8IXQ3 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.86□□□□□ -1.63
C9orf40Q8IXQ3 RPS4XP12-201ENST00000461747 709 ntBASIC4.86□□□□□ -1.63
C9orf40Q8IXQ3 AC005532.2-201ENST00000467154 373 ntBASIC4.86□□□□□ -1.63
C9orf40Q8IXQ3 RN7SL214P-201ENST00000487317 265 ntBASIC4.86□□□□□ -1.63
C9orf40Q8IXQ3 RPSAP51-201ENST00000497462 645 ntBASIC4.86□□□□□ -1.63
C9orf40Q8IXQ3 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC4.86□□□□□ -1.63
C9orf40Q8IXQ3 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC4.86□□□□□ -1.63
C9orf40Q8IXQ3 IMPA1P1-201ENST00000510718 842 ntBASIC4.86□□□□□ -1.63
C9orf40Q8IXQ3 GTF2F2P1-201ENST00000511083 675 ntBASIC4.86□□□□□ -1.63
C9orf40Q8IXQ3 LECT2-205ENST00000522943 574 ntTSL 3 BASIC4.86□□□□□ -1.63
C9orf40Q8IXQ3 AC134349.2-201ENST00000535136 910 ntBASIC4.86□□□□□ -1.63
C9orf40Q8IXQ3 CLMN-206ENST00000556441 452 ntTSL 5 BASIC4.86□□□□□ -1.63
C9orf40Q8IXQ3 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.86□□□□□ -1.63
C9orf40Q8IXQ3 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC4.86□□□□□ -1.63
C9orf40Q8IXQ3 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.86□□□□□ -1.63
C9orf40Q8IXQ3 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.86□□□□□ -1.63
C9orf40Q8IXQ3 MIR4433B-201ENST00000581329 102 ntBASIC4.86□□□□□ -1.63
C9orf40Q8IXQ3 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC4.86□□□□□ -1.63
C9orf40Q8IXQ3 AC011626.1-201ENST00000604710 562 ntBASIC4.86□□□□□ -1.63
C9orf40Q8IXQ3 AC243960.7-201ENST00000623532 707 ntBASIC4.86□□□□□ -1.63
C9orf40Q8IXQ3 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC4.86□□□□□ -1.63
C9orf40Q8IXQ3 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.86□□□□□ -1.63
C9orf40Q8IXQ3 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
C9orf40Q8IXQ3 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC4.86□□□□□ -1.63
C9orf40Q8IXQ3 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
C9orf40Q8IXQ3 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
C9orf40Q8IXQ3 MRRFP1-201ENST00000435941 1675 ntBASIC4.86□□□□□ -1.63
C9orf40Q8IXQ3 CDY11P-201ENST00000447168 1651 ntBASIC4.86□□□□□ -1.63
C9orf40Q8IXQ3 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
C9orf40Q8IXQ3 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
C9orf40Q8IXQ3 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
C9orf40Q8IXQ3 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC4.85□□□□□ -1.63
C9orf40Q8IXQ3 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
C9orf40Q8IXQ3 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
C9orf40Q8IXQ3 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
C9orf40Q8IXQ3 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
C9orf40Q8IXQ3 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
C9orf40Q8IXQ3 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
C9orf40Q8IXQ3 RNA5SP90-201ENST00000364801 99 ntBASIC4.85□□□□□ -1.63
C9orf40Q8IXQ3 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.85□□□□□ -1.63
C9orf40Q8IXQ3 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
C9orf40Q8IXQ3 GPS2P1-201ENST00000411761 986 ntBASIC4.85□□□□□ -1.63
C9orf40Q8IXQ3 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.85□□□□□ -1.63
C9orf40Q8IXQ3 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
C9orf40Q8IXQ3 EEF1B2P5-201ENST00000444820 548 ntBASIC4.85□□□□□ -1.63
C9orf40Q8IXQ3 NPM1P19-201ENST00000450070 712 ntBASIC4.85□□□□□ -1.63
C9orf40Q8IXQ3 DNAJB5P1-201ENST00000454004 806 ntBASIC4.85□□□□□ -1.63
C9orf40Q8IXQ3 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.85□□□□□ -1.63
C9orf40Q8IXQ3 AC108161.1-201ENST00000461060 402 ntBASIC4.85□□□□□ -1.63
C9orf40Q8IXQ3 AC009127.1-201ENST00000467090 155 ntBASIC4.85□□□□□ -1.63
C9orf40Q8IXQ3 RN7SL814P-201ENST00000487715 300 ntBASIC4.85□□□□□ -1.63
C9orf40Q8IXQ3 AC006427.1-201ENST00000514359 712 ntBASIC4.85□□□□□ -1.63
C9orf40Q8IXQ3 FTH1P11-201ENST00000517577 551 ntBASIC4.85□□□□□ -1.63
C9orf40Q8IXQ3 AC012400.1-201ENST00000518452 381 ntBASIC4.85□□□□□ -1.63
C9orf40Q8IXQ3 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC4.85□□□□□ -1.63
C9orf40Q8IXQ3 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.85□□□□□ -1.63
C9orf40Q8IXQ3 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.85□□□□□ -1.63
C9orf40Q8IXQ3 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
C9orf40Q8IXQ3 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
C9orf40Q8IXQ3 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.85□□□□□ -1.63
C9orf40Q8IXQ3 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
C9orf40Q8IXQ3 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
C9orf40Q8IXQ3 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.85□□□□□ -1.63
C9orf40Q8IXQ3 RN7SL290P-201ENST00000578661 300 ntBASIC4.85□□□□□ -1.63
C9orf40Q8IXQ3 AC023389.2-201ENST00000580031 955 ntBASIC4.85□□□□□ -1.63
C9orf40Q8IXQ3 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC4.85□□□□□ -1.63
C9orf40Q8IXQ3 RN7SL708P-201ENST00000580952 299 ntBASIC4.85□□□□□ -1.63
C9orf40Q8IXQ3 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC4.85□□□□□ -1.63
C9orf40Q8IXQ3 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.85□□□□□ -1.63
C9orf40Q8IXQ3 AC095055.1-201ENST00000603472 1113 ntBASIC4.85□□□□□ -1.63
C9orf40Q8IXQ3 AC096586.2-201ENST00000610260 441 ntBASIC4.85□□□□□ -1.63
C9orf40Q8IXQ3 SDR42E1P1-201ENST00000611327 477 ntBASIC4.85□□□□□ -1.63
C9orf40Q8IXQ3 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
C9orf40Q8IXQ3 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.85□□□□□ -1.63
C9orf40Q8IXQ3 MTCO1P22-201ENST00000604619 1360 ntBASIC4.85□□□□□ -1.63
C9orf40Q8IXQ3 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC4.85□□□□□ -1.63
C9orf40Q8IXQ3 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
C9orf40Q8IXQ3 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.85□□□□□ -1.63
C9orf40Q8IXQ3 AC023421.1-201ENST00000590535 1785 ntBASIC4.85□□□□□ -1.63
C9orf40Q8IXQ3 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
C9orf40Q8IXQ3 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
C9orf40Q8IXQ3 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
C9orf40Q8IXQ3 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms