Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AP001267.4-201ENST00000602598 545 ntBASIC6.12□□□□□ -1.43
SHROOM1Q2M3G4 AL162431.4-201ENST00000604674 411 ntBASIC6.12□□□□□ -1.43
SHROOM1Q2M3G4 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC6.12□□□□□ -1.43
SHROOM1Q2M3G4 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC6.12□□□□□ -1.43
SHROOM1Q2M3G4 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC6.12□□□□□ -1.43
SHROOM1Q2M3G4 MAPK10-338ENST00000641647 3362 ntBASIC6.12□□□□□ -1.43
SHROOM1Q2M3G4 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
SHROOM1Q2M3G4 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC6.12□□□□□ -1.43
SHROOM1Q2M3G4 RMST-209ENST00000639542 3269 ntTSL 5 BASIC6.12□□□□□ -1.43
SHROOM1Q2M3G4 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
SHROOM1Q2M3G4 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SHROOM1Q2M3G4 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SHROOM1Q2M3G4 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SHROOM1Q2M3G4 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SHROOM1Q2M3G4 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.11□□□□□ -1.43
SHROOM1Q2M3G4 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SHROOM1Q2M3G4 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.11□□□□□ -1.43
SHROOM1Q2M3G4 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.11□□□□□ -1.43
SHROOM1Q2M3G4 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.11□□□□□ -1.43
SHROOM1Q2M3G4 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC6.11□□□□□ -1.43
SHROOM1Q2M3G4 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC6.11□□□□□ -1.43
SHROOM1Q2M3G4 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC6.11□□□□□ -1.43
SHROOM1Q2M3G4 CR382285.2-201ENST00000624662 1495 ntBASIC6.11□□□□□ -1.43
SHROOM1Q2M3G4 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
SHROOM1Q2M3G4 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC6.11□□□□□ -1.43
SHROOM1Q2M3G4 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
SHROOM1Q2M3G4 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SHROOM1Q2M3G4 CHMP1B2P-201ENST00000399581 597 ntBASIC6.11□□□□□ -1.43
SHROOM1Q2M3G4 NUDT19P3-201ENST00000404698 555 ntBASIC6.11□□□□□ -1.43
SHROOM1Q2M3G4 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC6.11□□□□□ -1.43
SHROOM1Q2M3G4 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC6.11□□□□□ -1.43
SHROOM1Q2M3G4 MRPS21P2-201ENST00000424704 264 ntBASIC6.11□□□□□ -1.43
SHROOM1Q2M3G4 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC6.11□□□□□ -1.43
SHROOM1Q2M3G4 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC6.11□□□□□ -1.43
SHROOM1Q2M3G4 H2AFZP6-201ENST00000444403 394 ntBASIC6.11□□□□□ -1.43
SHROOM1Q2M3G4 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC6.11□□□□□ -1.43
SHROOM1Q2M3G4 RPS29P33-201ENST00000456717 146 ntBASIC6.11□□□□□ -1.43
SHROOM1Q2M3G4 snoU13.29-201ENST00000459370 104 ntBASIC6.11□□□□□ -1.43
SHROOM1Q2M3G4 RPL7P40-201ENST00000481703 745 ntBASIC6.11□□□□□ -1.43
SHROOM1Q2M3G4 HMGN2P25-201ENST00000486956 268 ntBASIC6.11□□□□□ -1.43
SHROOM1Q2M3G4 SNORA26.10-201ENST00000516427 141 ntBASIC6.11□□□□□ -1.43
SHROOM1Q2M3G4 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC6.11□□□□□ -1.43
SHROOM1Q2M3G4 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC6.11□□□□□ -1.43
SHROOM1Q2M3G4 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC6.11□□□□□ -1.43
SHROOM1Q2M3G4 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.11□□□□□ -1.43
SHROOM1Q2M3G4 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC6.11□□□□□ -1.43
SHROOM1Q2M3G4 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC6.11□□□□□ -1.43
SHROOM1Q2M3G4 AC073342.3-201ENST00000624211 193 ntBASIC6.11□□□□□ -1.43
SHROOM1Q2M3G4 AP001153.1-201ENST00000641024 338 ntBASIC6.11□□□□□ -1.43
SHROOM1Q2M3G4 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SHROOM1Q2M3G4 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SHROOM1Q2M3G4 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SHROOM1Q2M3G4 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
SHROOM1Q2M3G4 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC6.11□□□□□ -1.43
SHROOM1Q2M3G4 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SHROOM1Q2M3G4 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
SHROOM1Q2M3G4 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC6.1□□□□□ -1.43
SHROOM1Q2M3G4 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SHROOM1Q2M3G4 THAP12P4-201ENST00000528321 2266 ntBASIC6.1□□□□□ -1.43
SHROOM1Q2M3G4 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
SHROOM1Q2M3G4 SMG1P7-201ENST00000565246 2704 ntBASIC6.1□□□□□ -1.43
SHROOM1Q2M3G4 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SHROOM1Q2M3G4 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.1□□□□□ -1.43
SHROOM1Q2M3G4 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
SHROOM1Q2M3G4 AL353625.1-202ENST00000366273 571 ntBASIC6.1□□□□□ -1.43
SHROOM1Q2M3G4 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SHROOM1Q2M3G4 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
SHROOM1Q2M3G4 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC6.1□□□□□ -1.43
SHROOM1Q2M3G4 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC6.1□□□□□ -1.43
SHROOM1Q2M3G4 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC6.1□□□□□ -1.43
SHROOM1Q2M3G4 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC6.1□□□□□ -1.43
SHROOM1Q2M3G4 BX323845.1-201ENST00000432417 179 ntBASIC6.1□□□□□ -1.43
SHROOM1Q2M3G4 AL772161.1-201ENST00000439130 476 ntBASIC6.1□□□□□ -1.43
SHROOM1Q2M3G4 SEPT7P3-201ENST00000455017 621 ntBASIC6.1□□□□□ -1.43
SHROOM1Q2M3G4 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC6.1□□□□□ -1.43
SHROOM1Q2M3G4 DUBR-205ENST00000495228 411 ntTSL 2 BASIC6.1□□□□□ -1.43
SHROOM1Q2M3G4 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC6.1□□□□□ -1.43
SHROOM1Q2M3G4 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC6.1□□□□□ -1.43
SHROOM1Q2M3G4 OR4A6P-201ENST00000534364 970 ntBASIC6.1□□□□□ -1.43
SHROOM1Q2M3G4 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SHROOM1Q2M3G4 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC6.1□□□□□ -1.43
SHROOM1Q2M3G4 HNRNPCP1-201ENST00000556181 766 ntBASIC6.1□□□□□ -1.43
SHROOM1Q2M3G4 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC6.1□□□□□ -1.43
SHROOM1Q2M3G4 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC6.1□□□□□ -1.43
SHROOM1Q2M3G4 ADAM3B-201ENST00000569937 840 ntBASIC6.1□□□□□ -1.43
SHROOM1Q2M3G4 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SHROOM1Q2M3G4 MEMO1P5-201ENST00000604810 406 ntBASIC6.1□□□□□ -1.43
SHROOM1Q2M3G4 MIR6820-201ENST00000611508 62 ntBASIC6.1□□□□□ -1.43
SHROOM1Q2M3G4 AC006484.1-201ENST00000435086 1884 ntBASIC6.1□□□□□ -1.43
SHROOM1Q2M3G4 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
SHROOM1Q2M3G4 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SHROOM1Q2M3G4 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SHROOM1Q2M3G4 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC6.1□□□□□ -1.43
SHROOM1Q2M3G4 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC6.1□□□□□ -1.43
SHROOM1Q2M3G4 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
SHROOM1Q2M3G4 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
SHROOM1Q2M3G4 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC6.09□□□□□ -1.43
SHROOM1Q2M3G4 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SHROOM1Q2M3G4 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SHROOM1Q2M3G4 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms