Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AC007161.1-204ENST00000423039 460 ntBASIC6.64□□□□□ -1.35
RHBDL3P58872 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC6.64□□□□□ -1.35
RHBDL3P58872 CYCSP6-201ENST00000434498 302 ntBASIC6.64□□□□□ -1.35
RHBDL3P58872 EEF1B2P5-201ENST00000444820 548 ntBASIC6.64□□□□□ -1.35
RHBDL3P58872 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.64□□□□□ -1.35
RHBDL3P58872 RPL23AP23-201ENST00000452590 471 ntBASIC6.64□□□□□ -1.35
RHBDL3P58872 MTND2P6-201ENST00000455337 1030 ntBASIC6.64□□□□□ -1.35
RHBDL3P58872 RPS21P4-201ENST00000487122 248 ntBASIC6.64□□□□□ -1.35
RHBDL3P58872 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.64□□□□□ -1.35
RHBDL3P58872 RPEP1-201ENST00000504507 658 ntBASIC6.64□□□□□ -1.35
RHBDL3P58872 HIGD1AP14-201ENST00000507617 282 ntBASIC6.64□□□□□ -1.35
RHBDL3P58872 RPS27AP18-201ENST00000515536 459 ntBASIC6.64□□□□□ -1.35
RHBDL3P58872 AP003049.1-201ENST00000529418 457 ntBASIC6.64□□□□□ -1.35
RHBDL3P58872 AC004923.2-201ENST00000529649 369 ntBASIC6.64□□□□□ -1.35
RHBDL3P58872 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC6.64□□□□□ -1.35
RHBDL3P58872 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC6.64□□□□□ -1.35
RHBDL3P58872 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC6.64□□□□□ -1.35
RHBDL3P58872 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC6.64□□□□□ -1.35
RHBDL3P58872 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC6.64□□□□□ -1.35
RHBDL3P58872 SUMO2P14-201ENST00000604488 293 ntBASIC6.64□□□□□ -1.35
RHBDL3P58872 AC110792.4-201ENST00000609843 298 ntBASIC6.64□□□□□ -1.35
RHBDL3P58872 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC6.64□□□□□ -1.35
RHBDL3P58872 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
RHBDL3P58872 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC6.64□□□□□ -1.35
RHBDL3P58872 AC090617.9-201ENST00000623751 147 ntBASIC6.64□□□□□ -1.35
RHBDL3P58872 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC6.64□□□□□ -1.35
RHBDL3P58872 CFTRP2-201ENST00000634304 199 ntBASIC6.64□□□□□ -1.35
RHBDL3P58872 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.64□□□□□ -1.35
RHBDL3P58872 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
RHBDL3P58872 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
RHBDL3P58872 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
RHBDL3P58872 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
RHBDL3P58872 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC6.64□□□□□ -1.35
RHBDL3P58872 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
RHBDL3P58872 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC6.64□□□□□ -1.35
RHBDL3P58872 AC144833.1-201ENST00000567953 4089 ntBASIC6.64□□□□□ -1.35
RHBDL3P58872 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
RHBDL3P58872 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
RHBDL3P58872 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
RHBDL3P58872 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
RHBDL3P58872 MIR133B-201ENST00000362210 119 ntBASIC6.63□□□□□ -1.35
RHBDL3P58872 RNA5SP326-201ENST00000363209 110 ntBASIC6.63□□□□□ -1.35
RHBDL3P58872 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
RHBDL3P58872 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
RHBDL3P58872 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
RHBDL3P58872 CDC123-202ENST00000378900 933 ntTSL 5 BASIC6.63□□□□□ -1.35
RHBDL3P58872 RNU6-532P-201ENST00000384318 107 ntBASIC6.63□□□□□ -1.35
RHBDL3P58872 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC6.63□□□□□ -1.35
RHBDL3P58872 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
RHBDL3P58872 HMGB1P10-201ENST00000395823 563 ntBASIC6.63□□□□□ -1.35
RHBDL3P58872 AL009179.1-201ENST00000406085 265 ntBASIC6.63□□□□□ -1.35
RHBDL3P58872 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC6.63□□□□□ -1.35
RHBDL3P58872 AC096921.1-201ENST00000411661 375 ntBASIC6.63□□□□□ -1.35
RHBDL3P58872 TATDN1P1-201ENST00000414123 891 ntBASIC6.63□□□□□ -1.35
RHBDL3P58872 SLC35E1P1-201ENST00000419313 864 ntBASIC6.63□□□□□ -1.35
RHBDL3P58872 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
RHBDL3P58872 HSPA8P17-201ENST00000427029 1382 ntBASIC6.63□□□□□ -1.35
RHBDL3P58872 AL139148.1-201ENST00000427122 680 ntBASIC6.63□□□□□ -1.35
RHBDL3P58872 AL160175.1-201ENST00000428124 247 ntBASIC6.63□□□□□ -1.35
RHBDL3P58872 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.63□□□□□ -1.35
RHBDL3P58872 OR52B5P-201ENST00000435337 951 ntBASIC6.63□□□□□ -1.35
RHBDL3P58872 PTMAP6-201ENST00000439110 327 ntBASIC6.63□□□□□ -1.35
RHBDL3P58872 AL390879.1-201ENST00000439143 386 ntBASIC6.63□□□□□ -1.35
RHBDL3P58872 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC6.63□□□□□ -1.35
RHBDL3P58872 AC245047.2-201ENST00000441060 530 ntBASIC6.63□□□□□ -1.35
RHBDL3P58872 AC092106.1-201ENST00000444291 373 ntBASIC6.63□□□□□ -1.35
RHBDL3P58872 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC6.63□□□□□ -1.35
RHBDL3P58872 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC6.63□□□□□ -1.35
RHBDL3P58872 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC6.63□□□□□ -1.35
RHBDL3P58872 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC6.63□□□□□ -1.35
RHBDL3P58872 RN7SL172P-201ENST00000460535 303 ntBASIC6.63□□□□□ -1.35
RHBDL3P58872 NPM1P17-201ENST00000479221 602 ntBASIC6.63□□□□□ -1.35
RHBDL3P58872 AC004815.1-201ENST00000484185 331 ntBASIC6.63□□□□□ -1.35
RHBDL3P58872 RPL23AP73-201ENST00000492507 471 ntBASIC6.63□□□□□ -1.35
RHBDL3P58872 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC6.63□□□□□ -1.35
RHBDL3P58872 AC027338.1-201ENST00000514840 825 ntBASIC6.63□□□□□ -1.35
RHBDL3P58872 RN7SKP253-201ENST00000516424 309 ntBASIC6.63□□□□□ -1.35
RHBDL3P58872 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC6.63□□□□□ -1.35
RHBDL3P58872 ARL6IP1P3-201ENST00000524544 560 ntBASIC6.63□□□□□ -1.35
RHBDL3P58872 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.63□□□□□ -1.35
RHBDL3P58872 ASB8-215ENST00000540782 659 ntTSL 3 BASIC6.63□□□□□ -1.35
RHBDL3P58872 AC093014.1-201ENST00000548926 724 ntBASIC6.63□□□□□ -1.35
RHBDL3P58872 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC6.63□□□□□ -1.35
RHBDL3P58872 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC6.63□□□□□ -1.35
RHBDL3P58872 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
RHBDL3P58872 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC6.63□□□□□ -1.35
RHBDL3P58872 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
RHBDL3P58872 AC097372.4-201ENST00000625025 466 ntBASIC6.63□□□□□ -1.35
RHBDL3P58872 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC6.63□□□□□ -1.35
RHBDL3P58872 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC6.63□□□□□ -1.35
RHBDL3P58872 OR52B5P-202ENST00000641118 1110 ntBASIC6.63□□□□□ -1.35
RHBDL3P58872 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
RHBDL3P58872 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
RHBDL3P58872 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.63□□□□□ -1.35
RHBDL3P58872 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.63□□□□□ -1.35
RHBDL3P58872 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
RHBDL3P58872 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC6.63□□□□□ -1.35
RHBDL3P58872 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.63□□□□□ -1.35
RHBDL3P58872 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
RHBDL3P58872 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms