Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 AP000534.2-201ENST00000412729 568 ntBASIC4.95□□□□□ -1.62
LIM2P55344 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
LIM2P55344 AL161722.2-201ENST00000434731 981 ntBASIC4.95□□□□□ -1.62
LIM2P55344 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.95□□□□□ -1.62
LIM2P55344 AC245047.2-201ENST00000441060 530 ntBASIC4.95□□□□□ -1.62
LIM2P55344 THAP12P8-201ENST00000447914 2115 ntBASIC4.95□□□□□ -1.62
LIM2P55344 GAPDHP14-201ENST00000450472 937 ntBASIC4.95□□□□□ -1.62
LIM2P55344 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.95□□□□□ -1.62
LIM2P55344 OR7L1P-201ENST00000456181 380 ntBASIC4.95□□□□□ -1.62
LIM2P55344 RN7SL189P-201ENST00000468631 289 ntBASIC4.95□□□□□ -1.62
LIM2P55344 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC4.95□□□□□ -1.62
LIM2P55344 AL049874.2-201ENST00000492636 288 ntBASIC4.95□□□□□ -1.62
LIM2P55344 AC012400.1-201ENST00000518452 381 ntBASIC4.95□□□□□ -1.62
LIM2P55344 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.95□□□□□ -1.62
LIM2P55344 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC4.95□□□□□ -1.62
LIM2P55344 IGHVIII-67-4-201ENST00000524281 296 ntBASIC4.95□□□□□ -1.62
LIM2P55344 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC4.95□□□□□ -1.62
LIM2P55344 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.95□□□□□ -1.62
LIM2P55344 MIR1269B-201ENST00000580405 75 ntBASIC4.95□□□□□ -1.62
LIM2P55344 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC4.95□□□□□ -1.62
LIM2P55344 SUMO2P15-201ENST00000604285 278 ntBASIC4.95□□□□□ -1.62
LIM2P55344 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC4.95□□□□□ -1.62
LIM2P55344 NF1P10-201ENST00000613227 742 ntBASIC4.95□□□□□ -1.62
LIM2P55344 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC4.95□□□□□ -1.62
LIM2P55344 AC093909.5-201ENST00000621839 1799 ntBASIC4.95□□□□□ -1.62
LIM2P55344 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.95□□□□□ -1.62
LIM2P55344 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC4.95□□□□□ -1.62
LIM2P55344 AC235565.1-201ENST00000456962 1325 ntBASIC4.95□□□□□ -1.62
LIM2P55344 AL929601.4-201ENST00000613011 1341 ntBASIC4.95□□□□□ -1.62
LIM2P55344 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.95□□□□□ -1.62
LIM2P55344 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC4.95□□□□□ -1.62
LIM2P55344 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.94□□□□□ -1.62
LIM2P55344 FGG-205ENST00000407946 1636 ntTSL 5 BASIC4.94□□□□□ -1.62
LIM2P55344 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
LIM2P55344 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.94□□□□□ -1.62
LIM2P55344 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
LIM2P55344 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC4.94□□□□□ -1.62
LIM2P55344 TRIM51GP-201ENST00000534741 1350 ntBASIC4.94□□□□□ -1.62
LIM2P55344 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.94□□□□□ -1.62
LIM2P55344 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC4.94□□□□□ -1.62
LIM2P55344 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC4.94□□□□□ -1.62
LIM2P55344 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
LIM2P55344 OR9K1P-201ENST00000326513 941 ntBASIC4.94□□□□□ -1.62
LIM2P55344 RNU1-43P-201ENST00000365052 165 ntBASIC4.94□□□□□ -1.62
LIM2P55344 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.94□□□□□ -1.62
LIM2P55344 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC4.94□□□□□ -1.62
LIM2P55344 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
LIM2P55344 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
LIM2P55344 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.94□□□□□ -1.62
LIM2P55344 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.94□□□□□ -1.62
LIM2P55344 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC4.94□□□□□ -1.62
LIM2P55344 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.94□□□□□ -1.62
LIM2P55344 NANOGP4-201ENST00000427230 913 ntBASIC4.94□□□□□ -1.62
LIM2P55344 RPS29P10-201ENST00000439197 166 ntBASIC4.94□□□□□ -1.62
LIM2P55344 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC4.94□□□□□ -1.62
LIM2P55344 RN7SL172P-201ENST00000460535 303 ntBASIC4.94□□□□□ -1.62
LIM2P55344 AC108161.1-201ENST00000461060 402 ntBASIC4.94□□□□□ -1.62
LIM2P55344 AC021660.1-201ENST00000465006 554 ntBASIC4.94□□□□□ -1.62
LIM2P55344 RN7SL30P-201ENST00000488416 306 ntBASIC4.94□□□□□ -1.62
LIM2P55344 AL133372.1-201ENST00000493565 745 ntBASIC4.94□□□□□ -1.62
LIM2P55344 MYL12BP2-201ENST00000503948 512 ntBASIC4.94□□□□□ -1.62
LIM2P55344 GTF2F2P1-201ENST00000511083 675 ntBASIC4.94□□□□□ -1.62
LIM2P55344 AC100784.1-201ENST00000522790 310 ntBASIC4.94□□□□□ -1.62
LIM2P55344 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC4.94□□□□□ -1.62
LIM2P55344 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
LIM2P55344 AC134349.2-201ENST00000535136 910 ntBASIC4.94□□□□□ -1.62
LIM2P55344 AP000619.2-201ENST00000546014 969 ntBASIC4.94□□□□□ -1.62
LIM2P55344 AC004825.1-201ENST00000555068 586 ntBASIC4.94□□□□□ -1.62
LIM2P55344 AC010547.7-201ENST00000570323 333 ntBASIC4.94□□□□□ -1.62
LIM2P55344 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.94□□□□□ -1.62
LIM2P55344 AL512624.1-201ENST00000613638 469 ntBASIC4.94□□□□□ -1.62
LIM2P55344 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
LIM2P55344 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC4.94□□□□□ -1.62
LIM2P55344 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.94□□□□□ -1.62
LIM2P55344 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC4.94□□□□□ -1.62
LIM2P55344 AC005899.7-201ENST00000618199 588 ntBASIC4.94□□□□□ -1.62
LIM2P55344 AP002505.2-201ENST00000623585 696 ntBASIC4.94□□□□□ -1.62
LIM2P55344 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
LIM2P55344 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
LIM2P55344 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
LIM2P55344 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC4.94□□□□□ -1.62
LIM2P55344 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC4.94□□□□□ -1.62
LIM2P55344 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.94□□□□□ -1.62
LIM2P55344 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC4.94□□□□□ -1.62
LIM2P55344 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.94□□□□□ -1.62
LIM2P55344 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
LIM2P55344 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC4.94□□□□□ -1.62
LIM2P55344 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.93□□□□□ -1.62
LIM2P55344 MAPK10-338ENST00000641647 3362 ntBASIC4.93□□□□□ -1.62
LIM2P55344 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LIM2P55344 AC006210.2-201ENST00000367074 1545 ntBASIC4.93□□□□□ -1.62
LIM2P55344 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC4.93□□□□□ -1.62
LIM2P55344 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.93□□□□□ -1.62
LIM2P55344 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LIM2P55344 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
LIM2P55344 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
LIM2P55344 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC4.93□□□□□ -1.62
LIM2P55344 RNU1-74P-201ENST00000384108 171 ntBASIC4.93□□□□□ -1.62
LIM2P55344 RNU6-171P-201ENST00000384354 107 ntBASIC4.93□□□□□ -1.62
LIM2P55344 MIR323B-201ENST00000385269 82 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms