Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.31□□□□□ -1.56
CDH13P55290 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC5.31□□□□□ -1.56
CDH13P55290 AL138895.2-201ENST00000603019 178 ntBASIC5.31□□□□□ -1.56
CDH13P55290 OR4H6P-202ENST00000603819 340 ntBASIC5.31□□□□□ -1.56
CDH13P55290 MIR6071-201ENST00000616741 78 ntBASIC5.31□□□□□ -1.56
CDH13P55290 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC5.31□□□□□ -1.56
CDH13P55290 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5.31□□□□□ -1.56
CDH13P55290 AC008691.1-209ENST00000642094 814 ntBASIC5.31□□□□□ -1.56
CDH13P55290 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CDH13P55290 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CDH13P55290 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.31□□□□□ -1.56
CDH13P55290 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.31□□□□□ -1.56
CDH13P55290 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CDH13P55290 AC112198.2-201ENST00000426589 6996 ntBASIC5.31□□□□□ -1.56
CDH13P55290 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CDH13P55290 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
CDH13P55290 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.31□□□□□ -1.56
CDH13P55290 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDH13P55290 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDH13P55290 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDH13P55290 YES1P1-201ENST00000418510 1628 ntBASIC5.3□□□□□ -1.56
CDH13P55290 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.3□□□□□ -1.56
CDH13P55290 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CDH13P55290 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.3□□□□□ -1.56
CDH13P55290 AC091305.2-201ENST00000624049 1576 ntBASIC5.3□□□□□ -1.56
CDH13P55290 OR9K1P-202ENST00000641111 3217 ntBASIC5.3□□□□□ -1.56
CDH13P55290 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDH13P55290 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
CDH13P55290 KARSP1-201ENST00000451871 1752 ntBASIC5.3□□□□□ -1.56
CDH13P55290 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
CDH13P55290 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
CDH13P55290 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDH13P55290 AC093849.1-201ENST00000563631 2209 ntBASIC5.3□□□□□ -1.56
CDH13P55290 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CDH13P55290 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
CDH13P55290 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CDH13P55290 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDH13P55290 RN7SKP6-201ENST00000364795 319 ntBASIC5.3□□□□□ -1.56
CDH13P55290 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.3□□□□□ -1.56
CDH13P55290 RNU6-40P-201ENST00000384254 107 ntBASIC5.3□□□□□ -1.56
CDH13P55290 SNORA16A-201ENST00000384342 137 ntBASIC5.3□□□□□ -1.56
CDH13P55290 RNU6-1320P-201ENST00000390838 107 ntBASIC5.3□□□□□ -1.56
CDH13P55290 RNU6-1269P-201ENST00000391139 107 ntBASIC5.3□□□□□ -1.56
CDH13P55290 GAPDHP15-201ENST00000398586 975 ntBASIC5.3□□□□□ -1.56
CDH13P55290 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.3□□□□□ -1.56
CDH13P55290 AL445213.1-201ENST00000412589 747 ntBASIC5.3□□□□□ -1.56
CDH13P55290 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.3□□□□□ -1.56
CDH13P55290 AL133173.1-201ENST00000423458 397 ntBASIC5.3□□□□□ -1.56
CDH13P55290 SETP10-201ENST00000424368 814 ntBASIC5.3□□□□□ -1.56
CDH13P55290 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CDH13P55290 RPL7AP49-201ENST00000429522 581 ntBASIC5.3□□□□□ -1.56
CDH13P55290 AL591438.1-201ENST00000433508 581 ntBASIC5.3□□□□□ -1.56
CDH13P55290 MTCYBP29-201ENST00000436327 1006 ntBASIC5.3□□□□□ -1.56
CDH13P55290 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.3□□□□□ -1.56
CDH13P55290 AL691517.1-201ENST00000440833 1235 ntBASIC5.3□□□□□ -1.56
CDH13P55290 AC090804.1-201ENST00000448870 490 ntBASIC5.3□□□□□ -1.56
CDH13P55290 GAPDHP14-201ENST00000450472 937 ntBASIC5.3□□□□□ -1.56
CDH13P55290 AL450023.1-201ENST00000450868 751 ntBASIC5.3□□□□□ -1.56
CDH13P55290 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.3□□□□□ -1.56
CDH13P55290 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.3□□□□□ -1.56
CDH13P55290 RNU6-599P-201ENST00000459383 107 ntBASIC5.3□□□□□ -1.56
CDH13P55290 RNU6-1193P-201ENST00000459461 107 ntBASIC5.3□□□□□ -1.56
CDH13P55290 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC5.3□□□□□ -1.56
CDH13P55290 CDC42P3-201ENST00000518493 633 ntBASIC5.3□□□□□ -1.56
CDH13P55290 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.3□□□□□ -1.56
CDH13P55290 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.3□□□□□ -1.56
CDH13P55290 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.3□□□□□ -1.56
CDH13P55290 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC5.3□□□□□ -1.56
CDH13P55290 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CDH13P55290 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.3□□□□□ -1.56
CDH13P55290 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.3□□□□□ -1.56
CDH13P55290 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.3□□□□□ -1.56
CDH13P55290 AC134669.1-201ENST00000581275 672 ntBASIC5.3□□□□□ -1.56
CDH13P55290 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.3□□□□□ -1.56
CDH13P55290 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.3□□□□□ -1.56
CDH13P55290 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.3□□□□□ -1.56
CDH13P55290 AC244107.2-201ENST00000611773 76 ntBASIC5.3□□□□□ -1.56
CDH13P55290 RNU6-368P-201ENST00000620928 107 ntBASIC5.3□□□□□ -1.56
CDH13P55290 RNU6-538P-201ENST00000622329 107 ntBASIC5.3□□□□□ -1.56
CDH13P55290 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.3□□□□□ -1.56
CDH13P55290 MIR193BHG-214ENST00000641765 509 ntBASIC5.3□□□□□ -1.56
CDH13P55290 OR8A1-204ENST00000642111 1145 ntBASIC5.3□□□□□ -1.56
CDH13P55290 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDH13P55290 AC133552.1-201ENST00000569988 4007 ntBASIC5.3□□□□□ -1.56
CDH13P55290 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDH13P55290 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CDH13P55290 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CDH13P55290 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.3□□□□□ -1.56
CDH13P55290 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CDH13P55290 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CDH13P55290 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
CDH13P55290 MTCO1P7-201ENST00000419523 1542 ntBASIC5.29□□□□□ -1.56
CDH13P55290 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.29□□□□□ -1.56
CDH13P55290 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CDH13P55290 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CDH13P55290 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
CDH13P55290 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CDH13P55290 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CDH13P55290 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.29□□□□□ -1.56
CDH13P55290 RNU4-7P-201ENST00000364758 141 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms