Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC5.55□□□□□ -1.52
NR1H2P55055 AC073488.6-201ENST00000632293 754 ntBASIC5.55□□□□□ -1.52
NR1H2P55055 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
NR1H2P55055 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.55□□□□□ -1.52
NR1H2P55055 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.55□□□□□ -1.52
NR1H2P55055 MRRFP1-201ENST00000435941 1675 ntBASIC5.55□□□□□ -1.52
NR1H2P55055 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.55□□□□□ -1.52
NR1H2P55055 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
NR1H2P55055 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.55□□□□□ -1.52
NR1H2P55055 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
NR1H2P55055 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
NR1H2P55055 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.54□□□□□ -1.52
NR1H2P55055 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
NR1H2P55055 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.54□□□□□ -1.52
NR1H2P55055 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
NR1H2P55055 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
NR1H2P55055 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.54□□□□□ -1.52
NR1H2P55055 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
NR1H2P55055 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
NR1H2P55055 MIR142-201ENST00000384835 87 ntBASIC5.54□□□□□ -1.52
NR1H2P55055 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
NR1H2P55055 RN7SKP144-201ENST00000411108 279 ntBASIC5.54□□□□□ -1.52
NR1H2P55055 RN7SKP108-201ENST00000411367 328 ntBASIC5.54□□□□□ -1.52
NR1H2P55055 AL035422.1-201ENST00000414193 397 ntBASIC5.54□□□□□ -1.52
NR1H2P55055 VN1R42P-201ENST00000424651 344 ntBASIC5.54□□□□□ -1.52
NR1H2P55055 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.54□□□□□ -1.52
NR1H2P55055 SEC63P1-201ENST00000425785 1258 ntBASIC5.54□□□□□ -1.52
NR1H2P55055 RPS4XP16-201ENST00000427198 791 ntBASIC5.54□□□□□ -1.52
NR1H2P55055 TRAPPC13P1-201ENST00000435991 1062 ntBASIC5.54□□□□□ -1.52
NR1H2P55055 SOCS5P1-201ENST00000440415 949 ntBASIC5.54□□□□□ -1.52
NR1H2P55055 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.54□□□□□ -1.52
NR1H2P55055 CASP3P1-201ENST00000446037 609 ntBASIC5.54□□□□□ -1.52
NR1H2P55055 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC5.54□□□□□ -1.52
NR1H2P55055 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.54□□□□□ -1.52
NR1H2P55055 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC5.54□□□□□ -1.52
NR1H2P55055 RPL7P48-201ENST00000461513 746 ntBASIC5.54□□□□□ -1.52
NR1H2P55055 AC068228.1-201ENST00000461723 211 ntBASIC5.54□□□□□ -1.52
NR1H2P55055 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC5.54□□□□□ -1.52
NR1H2P55055 AC092902.1-201ENST00000486999 259 ntBASIC5.54□□□□□ -1.52
NR1H2P55055 RN7SL714P-201ENST00000487050 298 ntBASIC5.54□□□□□ -1.52
NR1H2P55055 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
NR1H2P55055 AC093890.1-201ENST00000502554 540 ntBASIC5.54□□□□□ -1.52
NR1H2P55055 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC5.54□□□□□ -1.52
NR1H2P55055 AC111193.1-201ENST00000504097 155 ntBASIC5.54□□□□□ -1.52
NR1H2P55055 SNX18P24-201ENST00000505249 671 ntBASIC5.54□□□□□ -1.52
NR1H2P55055 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.54□□□□□ -1.52
NR1H2P55055 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.54□□□□□ -1.52
NR1H2P55055 AC108471.1-201ENST00000513977 287 ntBASIC5.54□□□□□ -1.52
NR1H2P55055 RN7SKP288-201ENST00000516227 268 ntBASIC5.54□□□□□ -1.52
NR1H2P55055 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.54□□□□□ -1.52
NR1H2P55055 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC5.54□□□□□ -1.52
NR1H2P55055 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC5.54□□□□□ -1.52
NR1H2P55055 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.54□□□□□ -1.52
NR1H2P55055 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
NR1H2P55055 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.54□□□□□ -1.52
NR1H2P55055 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC5.54□□□□□ -1.52
NR1H2P55055 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.54□□□□□ -1.52
NR1H2P55055 LSM3P2-201ENST00000551246 273 ntBASIC5.54□□□□□ -1.52
NR1H2P55055 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
NR1H2P55055 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC5.54□□□□□ -1.52
NR1H2P55055 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
NR1H2P55055 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
NR1H2P55055 TPRX1P1-201ENST00000557620 319 ntBASIC5.54□□□□□ -1.52
NR1H2P55055 AC124283.4-201ENST00000581815 456 ntBASIC5.54□□□□□ -1.52
NR1H2P55055 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
NR1H2P55055 MIR548Y-201ENST00000582739 110 ntBASIC5.54□□□□□ -1.52
NR1H2P55055 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.54□□□□□ -1.52
NR1H2P55055 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
NR1H2P55055 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NR1H2P55055 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.54□□□□□ -1.52
NR1H2P55055 BNIP3P27-201ENST00000599991 412 ntBASIC5.54□□□□□ -1.52
NR1H2P55055 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.54□□□□□ -1.52
NR1H2P55055 METTL8-219ENST00000640734 726 ntTSL 2 BASIC5.54□□□□□ -1.52
NR1H2P55055 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
NR1H2P55055 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NR1H2P55055 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.54□□□□□ -1.52
NR1H2P55055 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
NR1H2P55055 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NR1H2P55055 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.54□□□□□ -1.52
NR1H2P55055 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.54□□□□□ -1.52
NR1H2P55055 TRIM51GP-201ENST00000534741 1350 ntBASIC5.54□□□□□ -1.52
NR1H2P55055 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.54□□□□□ -1.52
NR1H2P55055 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.53□□□□□ -1.52
NR1H2P55055 CCT8P1-201ENST00000413611 1657 ntBASIC5.53□□□□□ -1.52
NR1H2P55055 AC008432.1-201ENST00000615912 1320 ntBASIC5.53□□□□□ -1.52
NR1H2P55055 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.53□□□□□ -1.52
NR1H2P55055 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NR1H2P55055 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NR1H2P55055 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NR1H2P55055 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NR1H2P55055 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NR1H2P55055 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
NR1H2P55055 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NR1H2P55055 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
NR1H2P55055 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NR1H2P55055 METTL21EP-201ENST00000298105 713 ntBASIC5.53□□□□□ -1.52
NR1H2P55055 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
NR1H2P55055 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
NR1H2P55055 SNORA63.3-201ENST00000362682 132 ntBASIC5.53□□□□□ -1.52
NR1H2P55055 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms