Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.96□□□□□ -1.46
HMGCS2P54868 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.46
HMGCS2P54868 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.96□□□□□ -1.46
HMGCS2P54868 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
HMGCS2P54868 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.95□□□□□ -1.46
HMGCS2P54868 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HMGCS2P54868 AC138907.8-201ENST00000623981 2256 ntBASIC5.95□□□□□ -1.46
HMGCS2P54868 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
HMGCS2P54868 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.95□□□□□ -1.46
HMGCS2P54868 RNA5SP505-201ENST00000364748 108 ntBASIC5.95□□□□□ -1.46
HMGCS2P54868 RNU1-74P-201ENST00000384108 171 ntBASIC5.95□□□□□ -1.46
HMGCS2P54868 RAB28P1-201ENST00000411517 641 ntBASIC5.95□□□□□ -1.46
HMGCS2P54868 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HMGCS2P54868 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.95□□□□□ -1.46
HMGCS2P54868 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.95□□□□□ -1.46
HMGCS2P54868 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.95□□□□□ -1.46
HMGCS2P54868 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC5.95□□□□□ -1.46
HMGCS2P54868 OR52J1P-201ENST00000450596 932 ntBASIC5.95□□□□□ -1.46
HMGCS2P54868 RN7SL319P-201ENST00000480656 221 ntBASIC5.95□□□□□ -1.46
HMGCS2P54868 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HMGCS2P54868 AC010350.1-201ENST00000504908 231 ntBASIC5.95□□□□□ -1.46
HMGCS2P54868 MRPS33P2-201ENST00000507850 322 ntBASIC5.95□□□□□ -1.46
HMGCS2P54868 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.95□□□□□ -1.46
HMGCS2P54868 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.95□□□□□ -1.46
HMGCS2P54868 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.95□□□□□ -1.46
HMGCS2P54868 RAB9BP1-201ENST00000519581 626 ntBASIC5.95□□□□□ -1.46
HMGCS2P54868 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.95□□□□□ -1.46
HMGCS2P54868 OR5AN2P-201ENST00000534535 896 ntBASIC5.95□□□□□ -1.46
HMGCS2P54868 NMNAT1P1-201ENST00000554095 876 ntBASIC5.95□□□□□ -1.46
HMGCS2P54868 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.95□□□□□ -1.46
HMGCS2P54868 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HMGCS2P54868 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HMGCS2P54868 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.95□□□□□ -1.46
HMGCS2P54868 AC011626.1-201ENST00000604710 562 ntBASIC5.95□□□□□ -1.46
HMGCS2P54868 AP005432.2-201ENST00000608162 586 ntBASIC5.95□□□□□ -1.46
HMGCS2P54868 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.95□□□□□ -1.46
HMGCS2P54868 AL731566.2-201ENST00000618971 317 ntBASIC5.95□□□□□ -1.46
HMGCS2P54868 MIR7641-1-201ENST00000627518 61 ntBASIC5.95□□□□□ -1.46
HMGCS2P54868 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
HMGCS2P54868 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.95□□□□□ -1.46
HMGCS2P54868 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.95□□□□□ -1.46
HMGCS2P54868 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HMGCS2P54868 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HMGCS2P54868 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.95□□□□□ -1.46
HMGCS2P54868 AC093829.1-201ENST00000506662 1618 ntBASIC5.95□□□□□ -1.46
HMGCS2P54868 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HMGCS2P54868 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
HMGCS2P54868 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
HMGCS2P54868 SCARNA15-201ENST00000607520 4325 ntBASIC5.95□□□□□ -1.46
HMGCS2P54868 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.94□□□□□ -1.46
HMGCS2P54868 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HMGCS2P54868 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC5.94□□□□□ -1.46
HMGCS2P54868 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HMGCS2P54868 AL669831.5-218ENST00000591702 1873 ntBASIC5.94□□□□□ -1.46
HMGCS2P54868 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HMGCS2P54868 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
HMGCS2P54868 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
HMGCS2P54868 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HMGCS2P54868 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
HMGCS2P54868 MIR589-201ENST00000385238 99 ntBASIC5.94□□□□□ -1.46
HMGCS2P54868 RPL7P11-201ENST00000437586 658 ntBASIC5.94□□□□□ -1.46
HMGCS2P54868 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.94□□□□□ -1.46
HMGCS2P54868 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.94□□□□□ -1.46
HMGCS2P54868 REG1CP-206ENST00000447469 496 ntBASIC5.94□□□□□ -1.46
HMGCS2P54868 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC5.94□□□□□ -1.46
HMGCS2P54868 NDUFA12P1-201ENST00000455914 406 ntBASIC5.94□□□□□ -1.46
HMGCS2P54868 AC096741.1-201ENST00000472250 846 ntBASIC5.94□□□□□ -1.46
HMGCS2P54868 AC022133.1-201ENST00000490961 571 ntBASIC5.94□□□□□ -1.46
HMGCS2P54868 RNA5SP116-201ENST00000516132 98 ntBASIC5.94□□□□□ -1.46
HMGCS2P54868 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC5.94□□□□□ -1.46
HMGCS2P54868 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.94□□□□□ -1.46
HMGCS2P54868 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.94□□□□□ -1.46
HMGCS2P54868 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HMGCS2P54868 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HMGCS2P54868 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.94□□□□□ -1.46
HMGCS2P54868 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
HMGCS2P54868 MFSD8-216ENST00000641147 4009 ntBASIC5.94□□□□□ -1.46
HMGCS2P54868 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.94□□□□□ -1.46
HMGCS2P54868 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
HMGCS2P54868 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HMGCS2P54868 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
HMGCS2P54868 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC5.94□□□□□ -1.46
HMGCS2P54868 AC139426.3-201ENST00000605648 2059 ntBASIC5.94□□□□□ -1.46
HMGCS2P54868 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
HMGCS2P54868 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
HMGCS2P54868 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC5.94□□□□□ -1.46
HMGCS2P54868 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.93□□□□□ -1.46
HMGCS2P54868 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
HMGCS2P54868 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
HMGCS2P54868 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC5.93□□□□□ -1.46
HMGCS2P54868 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
HMGCS2P54868 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.93□□□□□ -1.46
HMGCS2P54868 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC5.93□□□□□ -1.46
HMGCS2P54868 RN7SKP153-201ENST00000365026 316 ntBASIC5.93□□□□□ -1.46
HMGCS2P54868 AL451142.1-201ENST00000375867 775 ntBASIC5.93□□□□□ -1.46
HMGCS2P54868 Z97832.1-201ENST00000402490 328 ntBASIC5.93□□□□□ -1.46
HMGCS2P54868 BX323845.1-201ENST00000432417 179 ntBASIC5.93□□□□□ -1.46
HMGCS2P54868 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.93□□□□□ -1.46
HMGCS2P54868 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.93□□□□□ -1.46
HMGCS2P54868 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms