Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 AP001029.2-203ENST00000589795 4910 ntBASIC5.4□□□□□ -1.54
HNF4AP41235 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.4□□□□□ -1.54
HNF4AP41235 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
HNF4AP41235 KARSP1-201ENST00000451871 1752 ntBASIC5.4□□□□□ -1.54
HNF4AP41235 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.4□□□□□ -1.54
HNF4AP41235 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
HNF4AP41235 RNA5SP284-201ENST00000384547 118 ntBASIC5.4□□□□□ -1.54
HNF4AP41235 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
HNF4AP41235 RPA2P2-201ENST00000419698 796 ntBASIC5.4□□□□□ -1.54
HNF4AP41235 HMGN2P27-201ENST00000427352 270 ntBASIC5.4□□□□□ -1.54
HNF4AP41235 AC079807.1-201ENST00000429993 481 ntBASIC5.4□□□□□ -1.54
HNF4AP41235 AC007563.3-201ENST00000433233 371 ntBASIC5.4□□□□□ -1.54
HNF4AP41235 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.4□□□□□ -1.54
HNF4AP41235 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.4□□□□□ -1.54
HNF4AP41235 MED28P3-201ENST00000444288 531 ntBASIC5.4□□□□□ -1.54
HNF4AP41235 PCNAP1-201ENST00000505363 709 ntBASIC5.4□□□□□ -1.54
HNF4AP41235 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.4□□□□□ -1.54
HNF4AP41235 AC090568.1-201ENST00000509499 856 ntBASIC5.4□□□□□ -1.54
HNF4AP41235 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.4□□□□□ -1.54
HNF4AP41235 RNU6-615P-201ENST00000516065 106 ntBASIC5.4□□□□□ -1.54
HNF4AP41235 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.4□□□□□ -1.54
HNF4AP41235 C1GALT1P1-201ENST00000548895 1089 ntBASIC5.4□□□□□ -1.54
HNF4AP41235 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.4□□□□□ -1.54
HNF4AP41235 AL390334.1-201ENST00000556395 450 ntBASIC5.4□□□□□ -1.54
HNF4AP41235 AC009852.2-201ENST00000567898 485 ntBASIC5.4□□□□□ -1.54
HNF4AP41235 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.4□□□□□ -1.54
HNF4AP41235 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.4□□□□□ -1.54
HNF4AP41235 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.4□□□□□ -1.54
HNF4AP41235 AC068020.1-201ENST00000594215 661 ntBASIC5.4□□□□□ -1.54
HNF4AP41235 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.4□□□□□ -1.54
HNF4AP41235 AC130352.1-201ENST00000602979 661 ntBASIC5.4□□□□□ -1.54
HNF4AP41235 AC007786.3-201ENST00000615154 596 ntBASIC5.4□□□□□ -1.54
HNF4AP41235 RPL23AP61-201ENST00000623642 466 ntBASIC5.4□□□□□ -1.54
HNF4AP41235 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.4□□□□□ -1.55
HNF4AP41235 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.4□□□□□ -1.55
HNF4AP41235 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
HNF4AP41235 AC002525.1-201ENST00000624392 1622 ntBASIC5.4□□□□□ -1.55
HNF4AP41235 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
HNF4AP41235 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
HNF4AP41235 AC005332.5-201ENST00000591222 2919 ntBASIC5.4□□□□□ -1.55
HNF4AP41235 AC007938.2-201ENST00000604666 2634 ntBASIC5.4□□□□□ -1.55
HNF4AP41235 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.55
HNF4AP41235 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.4□□□□□ -1.55
HNF4AP41235 AL603750.1-201ENST00000624216 1717 ntBASIC5.4□□□□□ -1.55
HNF4AP41235 AC114786.1-201ENST00000512892 1415 ntBASIC5.4□□□□□ -1.55
HNF4AP41235 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.4□□□□□ -1.55
HNF4AP41235 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HNF4AP41235 MAPK10-328ENST00000641553 4009 ntBASIC5.39□□□□□ -1.55
HNF4AP41235 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.39□□□□□ -1.55
HNF4AP41235 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
HNF4AP41235 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.39□□□□□ -1.55
HNF4AP41235 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HNF4AP41235 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HNF4AP41235 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HNF4AP41235 TMSB4XP4-201ENST00000323496 618 ntBASIC5.39□□□□□ -1.55
HNF4AP41235 RNU6-225P-201ENST00000384613 103 ntBASIC5.39□□□□□ -1.55
HNF4AP41235 U3.28-201ENST00000391249 210 ntBASIC5.39□□□□□ -1.55
HNF4AP41235 GSTA12P-201ENST00000402398 508 ntBASIC5.39□□□□□ -1.55
HNF4AP41235 NCSTNP1-201ENST00000406229 144 ntBASIC5.39□□□□□ -1.55
HNF4AP41235 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC5.39□□□□□ -1.55
HNF4AP41235 NPM1P40-201ENST00000412758 733 ntBASIC5.39□□□□□ -1.55
HNF4AP41235 OR2AT2P-201ENST00000413438 905 ntBASIC5.39□□□□□ -1.55
HNF4AP41235 AC079809.1-201ENST00000415468 276 ntBASIC5.39□□□□□ -1.55
HNF4AP41235 AC244453.4-201ENST00000419150 388 ntBASIC5.39□□□□□ -1.55
HNF4AP41235 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.39□□□□□ -1.55
HNF4AP41235 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.39□□□□□ -1.55
HNF4AP41235 RNF19BPX-201ENST00000426224 625 ntBASIC5.39□□□□□ -1.55
HNF4AP41235 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HNF4AP41235 RPL23AP19-201ENST00000436229 369 ntBASIC5.39□□□□□ -1.55
HNF4AP41235 AC006335.2-201ENST00000437993 330 ntBASIC5.39□□□□□ -1.55
HNF4AP41235 SUMO2P3-201ENST00000438311 288 ntBASIC5.39□□□□□ -1.55
HNF4AP41235 AC144530.1-201ENST00000452862 555 ntBASIC5.39□□□□□ -1.55
HNF4AP41235 AL354710.1-201ENST00000453641 246 ntBASIC5.39□□□□□ -1.55
HNF4AP41235 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC5.39□□□□□ -1.55
HNF4AP41235 AK5-208ENST00000478255 556 ntTSL 2 BASIC5.39□□□□□ -1.55
HNF4AP41235 RPL5P22-201ENST00000480199 884 ntBASIC5.39□□□□□ -1.55
HNF4AP41235 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
HNF4AP41235 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.39□□□□□ -1.55
HNF4AP41235 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.39□□□□□ -1.55
HNF4AP41235 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.39□□□□□ -1.55
HNF4AP41235 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.39□□□□□ -1.55
HNF4AP41235 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
HNF4AP41235 AC034244.2-201ENST00000514668 858 ntBASIC5.39□□□□□ -1.55
HNF4AP41235 RNA5SP228-201ENST00000516232 133 ntBASIC5.39□□□□□ -1.55
HNF4AP41235 SNORA48.9-201ENST00000516419 162 ntBASIC5.39□□□□□ -1.55
HNF4AP41235 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.39□□□□□ -1.55
HNF4AP41235 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.39□□□□□ -1.55
HNF4AP41235 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.39□□□□□ -1.55
HNF4AP41235 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.39□□□□□ -1.55
HNF4AP41235 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.39□□□□□ -1.55
HNF4AP41235 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.39□□□□□ -1.55
HNF4AP41235 MIR6133-201ENST00000617057 108 ntBASIC5.39□□□□□ -1.55
HNF4AP41235 AC026367.3-201ENST00000619032 590 ntBASIC5.39□□□□□ -1.55
HNF4AP41235 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.39□□□□□ -1.55
HNF4AP41235 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.39□□□□□ -1.55
HNF4AP41235 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HNF4AP41235 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HNF4AP41235 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
HNF4AP41235 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.39□□□□□ -1.55
HNF4AP41235 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 144.4 ms