Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC6.13□□□□□ -1.43
SCN4AP35499 BX510359.2-201ENST00000417920 305 ntBASIC6.13□□□□□ -1.43
SCN4AP35499 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC6.13□□□□□ -1.43
SCN4AP35499 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC6.13□□□□□ -1.43
SCN4AP35499 NIP7P2-201ENST00000485801 544 ntBASIC6.13□□□□□ -1.43
SCN4AP35499 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC6.13□□□□□ -1.43
SCN4AP35499 NPM1P42-201ENST00000560329 862 ntBASIC6.13□□□□□ -1.43
SCN4AP35499 CCDC58P3-201ENST00000590792 430 ntBASIC6.13□□□□□ -1.43
SCN4AP35499 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.13□□□□□ -1.43
SCN4AP35499 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SCN4AP35499 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
SCN4AP35499 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SCN4AP35499 OFD1P8Y-201ENST00000449148 1433 ntBASIC6.13□□□□□ -1.43
SCN4AP35499 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SCN4AP35499 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
SCN4AP35499 AL592148.3-201ENST00000608771 2646 ntBASIC6.13□□□□□ -1.43
SCN4AP35499 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SCN4AP35499 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.13□□□□□ -1.43
SCN4AP35499 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SCN4AP35499 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SCN4AP35499 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SCN4AP35499 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SCN4AP35499 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SCN4AP35499 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.13□□□□□ -1.43
SCN4AP35499 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.13□□□□□ -1.43
SCN4AP35499 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SCN4AP35499 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.13□□□□□ -1.43
SCN4AP35499 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SCN4AP35499 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
SCN4AP35499 AL590240.1-201ENST00000334118 313 ntBASIC6.13□□□□□ -1.43
SCN4AP35499 RNA5SP191-201ENST00000362585 102 ntBASIC6.13□□□□□ -1.43
SCN4AP35499 GNG5P2-201ENST00000372054 207 ntBASIC6.13□□□□□ -1.43
SCN4AP35499 Z97832.1-201ENST00000402490 328 ntBASIC6.13□□□□□ -1.43
SCN4AP35499 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SCN4AP35499 AL590399.2-201ENST00000427536 309 ntBASIC6.13□□□□□ -1.43
SCN4AP35499 CDC27P1-201ENST00000445384 715 ntBASIC6.13□□□□□ -1.43
SCN4AP35499 SLC25A18P1-201ENST00000449385 454 ntBASIC6.13□□□□□ -1.43
SCN4AP35499 RPL12P20-201ENST00000475538 479 ntBASIC6.13□□□□□ -1.43
SCN4AP35499 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC6.13□□□□□ -1.43
SCN4AP35499 SCARNA20.4-201ENST00000516969 131 ntBASIC6.13□□□□□ -1.43
SCN4AP35499 AC012339.2-201ENST00000523996 453 ntBASIC6.13□□□□□ -1.43
SCN4AP35499 MORF4L1P3-201ENST00000525966 950 ntBASIC6.13□□□□□ -1.43
SCN4AP35499 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SCN4AP35499 AC021483.2-201ENST00000567415 758 ntBASIC6.13□□□□□ -1.43
SCN4AP35499 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC6.13□□□□□ -1.43
SCN4AP35499 AC009027.1-201ENST00000604510 479 ntBASIC6.13□□□□□ -1.43
SCN4AP35499 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC6.13□□□□□ -1.43
SCN4AP35499 ASNSP1-204ENST00000641977 1664 ntBASIC6.13□□□□□ -1.43
SCN4AP35499 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SCN4AP35499 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.13□□□□□ -1.43
SCN4AP35499 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC6.13□□□□□ -1.43
SCN4AP35499 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SCN4AP35499 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SCN4AP35499 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
SCN4AP35499 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC6.12□□□□□ -1.43
SCN4AP35499 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SCN4AP35499 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
SCN4AP35499 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SCN4AP35499 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.12□□□□□ -1.43
SCN4AP35499 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SCN4AP35499 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
SCN4AP35499 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SCN4AP35499 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC6.12□□□□□ -1.43
SCN4AP35499 RPL11P3-201ENST00000395256 523 ntBASIC6.12□□□□□ -1.43
SCN4AP35499 RSU1P3-201ENST00000412878 835 ntBASIC6.12□□□□□ -1.43
SCN4AP35499 PPP1R11P1-201ENST00000486095 376 ntBASIC6.12□□□□□ -1.43
SCN4AP35499 MRPS33P2-201ENST00000507850 322 ntBASIC6.12□□□□□ -1.43
SCN4AP35499 snoU109.5-201ENST00000516231 132 ntBASIC6.12□□□□□ -1.43
SCN4AP35499 RN7SKP276-201ENST00000516242 268 ntBASIC6.12□□□□□ -1.43
SCN4AP35499 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC6.12□□□□□ -1.43
SCN4AP35499 RN7SL371P-201ENST00000578099 267 ntBASIC6.12□□□□□ -1.43
SCN4AP35499 AC244107.2-201ENST00000611773 76 ntBASIC6.12□□□□□ -1.43
SCN4AP35499 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SCN4AP35499 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SCN4AP35499 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SCN4AP35499 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
SCN4AP35499 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
SCN4AP35499 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC6.12□□□□□ -1.43
SCN4AP35499 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.12□□□□□ -1.43
SCN4AP35499 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC6.12□□□□□ -1.43
SCN4AP35499 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SCN4AP35499 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
SCN4AP35499 AC010928.1-201ENST00000592477 1447 ntBASIC6.11□□□□□ -1.43
SCN4AP35499 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SCN4AP35499 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SCN4AP35499 RN7SKP106-201ENST00000410832 272 ntBASIC6.11□□□□□ -1.43
SCN4AP35499 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC6.11□□□□□ -1.43
SCN4AP35499 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC6.11□□□□□ -1.43
SCN4AP35499 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC6.11□□□□□ -1.43
SCN4AP35499 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC6.11□□□□□ -1.43
SCN4AP35499 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.11□□□□□ -1.43
SCN4AP35499 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC6.11□□□□□ -1.43
SCN4AP35499 AL109766.1-201ENST00000555080 552 ntBASIC6.11□□□□□ -1.43
SCN4AP35499 GLRXP2-201ENST00000555594 321 ntBASIC6.11□□□□□ -1.43
SCN4AP35499 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC6.11□□□□□ -1.43
SCN4AP35499 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC6.11□□□□□ -1.43
SCN4AP35499 AC020915.5-201ENST00000596836 964 ntBASIC6.11□□□□□ -1.43
SCN4AP35499 AC005962.2-201ENST00000611427 652 ntBASIC6.11□□□□□ -1.43
SCN4AP35499 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SCN4AP35499 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms