Protein–RNA interactions for Protein: P28370

SMARCA1, Probable global transcription activator SNF2L1, humanhuman

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1P28370 AL355834.1-201ENST00000556602 3965 ntBASIC6.49□□□□□ -1.37
SMARCA1P28370 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SMARCA1P28370 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.49□□□□□ -1.37
SMARCA1P28370 AFP-201ENST00000226359 1914 ntTSL 5 BASIC6.49□□□□□ -1.37
SMARCA1P28370 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
SMARCA1P28370 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.49□□□□□ -1.37
SMARCA1P28370 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SMARCA1P28370 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SMARCA1P28370 AL121886.1-201ENST00000358609 435 ntBASIC6.49□□□□□ -1.37
SMARCA1P28370 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
SMARCA1P28370 NPM1P37-201ENST00000403105 874 ntBASIC6.49□□□□□ -1.37
SMARCA1P28370 AC096921.1-201ENST00000411661 375 ntBASIC6.49□□□□□ -1.37
SMARCA1P28370 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC6.49□□□□□ -1.37
SMARCA1P28370 TNPO1P1-201ENST00000423641 1138 ntBASIC6.49□□□□□ -1.37
SMARCA1P28370 TMEM183AP1-205ENST00000432739 290 ntBASIC6.49□□□□□ -1.37
SMARCA1P28370 AL606490.7-201ENST00000433136 191 ntBASIC6.49□□□□□ -1.37
SMARCA1P28370 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC6.49□□□□□ -1.37
SMARCA1P28370 CCRL1P1-201ENST00000449542 1053 ntBASIC6.49□□□□□ -1.37
SMARCA1P28370 snoU13.29-201ENST00000459370 104 ntBASIC6.49□□□□□ -1.37
SMARCA1P28370 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
SMARCA1P28370 RN7SL466P-201ENST00000497546 295 ntBASIC6.49□□□□□ -1.37
SMARCA1P28370 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC6.49□□□□□ -1.37
SMARCA1P28370 AP003355.1-201ENST00000518956 587 ntBASIC6.49□□□□□ -1.37
SMARCA1P28370 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC6.49□□□□□ -1.37
SMARCA1P28370 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC6.49□□□□□ -1.37
SMARCA1P28370 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC6.49□□□□□ -1.37
SMARCA1P28370 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC6.49□□□□□ -1.37
SMARCA1P28370 AC015720.2-201ENST00000567709 334 ntBASIC6.49□□□□□ -1.37
SMARCA1P28370 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC6.49□□□□□ -1.37
SMARCA1P28370 RN7SL339P-201ENST00000580597 296 ntBASIC6.49□□□□□ -1.37
SMARCA1P28370 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC6.49□□□□□ -1.37
SMARCA1P28370 AC011445.2-201ENST00000599274 173 ntBASIC6.49□□□□□ -1.37
SMARCA1P28370 HCG18-243ENST00000602498 327 ntTSL 3 BASIC6.49□□□□□ -1.37
SMARCA1P28370 AC023762.1-201ENST00000603280 584 ntBASIC6.49□□□□□ -1.37
SMARCA1P28370 AL159169.2-201ENST00000610061 1269 ntBASIC6.49□□□□□ -1.37
SMARCA1P28370 AL133370.2-201ENST00000619934 439 ntBASIC6.49□□□□□ -1.37
SMARCA1P28370 AC015722.2-201ENST00000622210 551 ntBASIC6.49□□□□□ -1.37
SMARCA1P28370 MIR4302-201ENST00000638058 60 ntBASIC6.49□□□□□ -1.37
SMARCA1P28370 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SMARCA1P28370 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SMARCA1P28370 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SMARCA1P28370 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SMARCA1P28370 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC6.49□□□□□ -1.37
SMARCA1P28370 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SMARCA1P28370 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
SMARCA1P28370 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SMARCA1P28370 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SMARCA1P28370 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SMARCA1P28370 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
SMARCA1P28370 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
SMARCA1P28370 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.48□□□□□ -1.37
SMARCA1P28370 DNM1P47-203ENST00000571780 12667 ntBASIC6.48□□□□□ -1.37
SMARCA1P28370 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC6.48□□□□□ -1.37
SMARCA1P28370 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.48□□□□□ -1.37
SMARCA1P28370 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
SMARCA1P28370 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC6.48□□□□□ -1.37
SMARCA1P28370 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SMARCA1P28370 CD86-204ENST00000469710 1604 ntTSL 2 BASIC6.48□□□□□ -1.37
SMARCA1P28370 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.48□□□□□ -1.37
SMARCA1P28370 MIR551A-201ENST00000385042 96 ntBASIC6.48□□□□□ -1.37
SMARCA1P28370 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC6.48□□□□□ -1.37
SMARCA1P28370 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC6.48□□□□□ -1.37
SMARCA1P28370 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC6.48□□□□□ -1.37
SMARCA1P28370 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC6.48□□□□□ -1.37
SMARCA1P28370 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC6.48□□□□□ -1.37
SMARCA1P28370 RPSAP39-201ENST00000467439 883 ntBASIC6.48□□□□□ -1.37
SMARCA1P28370 AC104629.2-201ENST00000468627 598 ntBASIC6.48□□□□□ -1.37
SMARCA1P28370 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC6.48□□□□□ -1.37
SMARCA1P28370 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC6.48□□□□□ -1.37
SMARCA1P28370 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC6.48□□□□□ -1.37
SMARCA1P28370 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC6.48□□□□□ -1.37
SMARCA1P28370 MINCR-206ENST00000524335 499 ntTSL 2 BASIC6.48□□□□□ -1.37
SMARCA1P28370 YWHAZP1-201ENST00000556286 722 ntBASIC6.48□□□□□ -1.37
SMARCA1P28370 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC6.48□□□□□ -1.37
SMARCA1P28370 AC084759.1-201ENST00000561168 290 ntBASIC6.48□□□□□ -1.37
SMARCA1P28370 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SMARCA1P28370 MRPS21P7-201ENST00000566937 238 ntBASIC6.48□□□□□ -1.37
SMARCA1P28370 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC6.48□□□□□ -1.37
SMARCA1P28370 RBM22P12-201ENST00000567098 1255 ntBASIC6.48□□□□□ -1.37
SMARCA1P28370 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SMARCA1P28370 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC6.48□□□□□ -1.37
SMARCA1P28370 AL589674.2-201ENST00000604304 337 ntBASIC6.48□□□□□ -1.37
SMARCA1P28370 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC6.48□□□□□ -1.37
SMARCA1P28370 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SMARCA1P28370 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC6.48□□□□□ -1.37
SMARCA1P28370 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC6.48□□□□□ -1.37
SMARCA1P28370 AC015712.7-201ENST00000615211 635 ntBASIC6.48□□□□□ -1.37
SMARCA1P28370 UOX-205ENST00000640983 544 ntTSL 4 BASIC6.48□□□□□ -1.37
SMARCA1P28370 AL355488.2-201ENST00000609909 2850 ntBASIC6.48□□□□□ -1.37
SMARCA1P28370 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SMARCA1P28370 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SMARCA1P28370 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
SMARCA1P28370 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
SMARCA1P28370 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SMARCA1P28370 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC6.48□□□□□ -1.37
SMARCA1P28370 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC6.48□□□□□ -1.37
SMARCA1P28370 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC6.48□□□□□ -1.37
SMARCA1P28370 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
SMARCA1P28370 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SMARCA1P28370 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms