Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
PTPN3P26045 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PTPN3P26045 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PTPN3P26045 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.48□□□□□ -1.53
PTPN3P26045 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
PTPN3P26045 AC097063.1-201ENST00000426714 1797 ntBASIC5.48□□□□□ -1.53
PTPN3P26045 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PTPN3P26045 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PTPN3P26045 SNORA17A-201ENST00000391185 133 ntBASIC5.48□□□□□ -1.53
PTPN3P26045 RNA5SP241-201ENST00000391326 114 ntBASIC5.48□□□□□ -1.53
PTPN3P26045 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.48□□□□□ -1.53
PTPN3P26045 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.48□□□□□ -1.53
PTPN3P26045 AL512504.1-201ENST00000415494 778 ntBASIC5.48□□□□□ -1.53
PTPN3P26045 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC5.48□□□□□ -1.53
PTPN3P26045 AC009506.2-201ENST00000420635 840 ntBASIC5.48□□□□□ -1.53
PTPN3P26045 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.48□□□□□ -1.53
PTPN3P26045 MRPS21P2-201ENST00000424704 264 ntBASIC5.48□□□□□ -1.53
PTPN3P26045 MTCO1P57-201ENST00000432182 261 ntBASIC5.48□□□□□ -1.53
PTPN3P26045 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.48□□□□□ -1.53
PTPN3P26045 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.48□□□□□ -1.53
PTPN3P26045 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.48□□□□□ -1.53
PTPN3P26045 CCRL1P1-201ENST00000449542 1053 ntBASIC5.48□□□□□ -1.53
PTPN3P26045 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.48□□□□□ -1.53
PTPN3P26045 TPRKBP1-201ENST00000456243 481 ntBASIC5.48□□□□□ -1.53
PTPN3P26045 AC108751.3-201ENST00000461814 1020 ntBASIC5.48□□□□□ -1.53
PTPN3P26045 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.48□□□□□ -1.53
PTPN3P26045 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.48□□□□□ -1.53
PTPN3P26045 AC058823.1-201ENST00000485315 474 ntBASIC5.48□□□□□ -1.53
PTPN3P26045 RN7SL466P-201ENST00000497546 295 ntBASIC5.48□□□□□ -1.53
PTPN3P26045 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.48□□□□□ -1.53
PTPN3P26045 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.48□□□□□ -1.53
PTPN3P26045 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.48□□□□□ -1.53
PTPN3P26045 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.48□□□□□ -1.53
PTPN3P26045 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.48□□□□□ -1.53
PTPN3P26045 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.48□□□□□ -1.53
PTPN3P26045 AC009027.1-201ENST00000604510 479 ntBASIC5.48□□□□□ -1.53
PTPN3P26045 OR51C1P-201ENST00000608504 942 ntBASIC5.48□□□□□ -1.53
PTPN3P26045 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.48□□□□□ -1.53
PTPN3P26045 AC109583.2-201ENST00000617367 129 ntBASIC5.48□□□□□ -1.53
PTPN3P26045 AC009032.1-201ENST00000617574 431 ntBASIC5.48□□□□□ -1.53
PTPN3P26045 RMST_5.1-201ENST00000618704 126 ntBASIC5.48□□□□□ -1.53
PTPN3P26045 AL133370.2-201ENST00000619934 439 ntBASIC5.48□□□□□ -1.53
PTPN3P26045 AC105105.5-201ENST00000622635 1294 ntBASIC5.48□□□□□ -1.53
PTPN3P26045 SNORA17.5-201ENST00000630429 132 ntBASIC5.48□□□□□ -1.53
PTPN3P26045 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.48□□□□□ -1.53
PTPN3P26045 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.48□□□□□ -1.53
PTPN3P26045 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
PTPN3P26045 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PTPN3P26045 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PTPN3P26045 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PTPN3P26045 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.48□□□□□ -1.53
PTPN3P26045 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
PTPN3P26045 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
PTPN3P26045 AC079298.1-201ENST00000625026 1619 ntBASIC5.48□□□□□ -1.53
PTPN3P26045 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.48□□□□□ -1.53
PTPN3P26045 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
PTPN3P26045 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
PTPN3P26045 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PTPN3P26045 AC097461.1-201ENST00000568928 2821 ntBASIC5.47□□□□□ -1.53
PTPN3P26045 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC5.47□□□□□ -1.53
PTPN3P26045 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PTPN3P26045 RNA5SP335-201ENST00000363817 110 ntBASIC5.47□□□□□ -1.53
PTPN3P26045 RNU6-1251P-201ENST00000364502 107 ntBASIC5.47□□□□□ -1.53
PTPN3P26045 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.47□□□□□ -1.53
PTPN3P26045 SNORD65-201ENST00000391079 73 ntBASIC5.47□□□□□ -1.53
PTPN3P26045 AC104297.1-201ENST00000393779 870 ntBASIC5.47□□□□□ -1.53
PTPN3P26045 NPM1P37-201ENST00000403105 874 ntBASIC5.47□□□□□ -1.53
PTPN3P26045 OR4K12P-201ENST00000406538 961 ntBASIC5.47□□□□□ -1.53
PTPN3P26045 RN7SKP293-201ENST00000411389 296 ntBASIC5.47□□□□□ -1.53
PTPN3P26045 AC079809.1-201ENST00000415468 276 ntBASIC5.47□□□□□ -1.53
PTPN3P26045 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.47□□□□□ -1.53
PTPN3P26045 AC124944.2-201ENST00000429866 1242 ntBASIC5.47□□□□□ -1.53
PTPN3P26045 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.47□□□□□ -1.53
PTPN3P26045 RPL19P16-201ENST00000433839 588 ntBASIC5.47□□□□□ -1.53
PTPN3P26045 GAPDHP25-201ENST00000447061 1001 ntBASIC5.47□□□□□ -1.53
PTPN3P26045 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.47□□□□□ -1.53
PTPN3P26045 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.47□□□□□ -1.53
PTPN3P26045 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.47□□□□□ -1.53
PTPN3P26045 AC100832.1-201ENST00000471945 383 ntBASIC5.47□□□□□ -1.53
PTPN3P26045 AC025181.1-201ENST00000477507 416 ntBASIC5.47□□□□□ -1.53
PTPN3P26045 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.47□□□□□ -1.53
PTPN3P26045 EIF1P7-201ENST00000487533 337 ntBASIC5.47□□□□□ -1.53
PTPN3P26045 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.47□□□□□ -1.53
PTPN3P26045 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.47□□□□□ -1.53
PTPN3P26045 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC5.47□□□□□ -1.53
PTPN3P26045 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PTPN3P26045 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.47□□□□□ -1.53
PTPN3P26045 IMPA1P1-201ENST00000510718 842 ntBASIC5.47□□□□□ -1.53
PTPN3P26045 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.47□□□□□ -1.53
PTPN3P26045 AC104997.1-201ENST00000519761 717 ntBASIC5.47□□□□□ -1.53
PTPN3P26045 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.47□□□□□ -1.53
PTPN3P26045 AC087272.1-201ENST00000523624 533 ntBASIC5.47□□□□□ -1.53
PTPN3P26045 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.47□□□□□ -1.53
PTPN3P26045 AP000859.1-201ENST00000525536 307 ntBASIC5.47□□□□□ -1.53
PTPN3P26045 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC5.47□□□□□ -1.53
PTPN3P26045 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
PTPN3P26045 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.47□□□□□ -1.53
PTPN3P26045 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PTPN3P26045 AC122134.1-201ENST00000565664 1104 ntBASIC5.47□□□□□ -1.53
PTPN3P26045 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms