Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.42□□□□□ -1.54
CDH3P22223 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.42□□□□□ -1.54
CDH3P22223 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
CDH3P22223 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CDH3P22223 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CDH3P22223 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
CDH3P22223 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CDH3P22223 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
CDH3P22223 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.41□□□□□ -1.54
CDH3P22223 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CDH3P22223 RNA5SP319-201ENST00000362768 119 ntBASIC5.41□□□□□ -1.54
CDH3P22223 RNU4-2-201ENST00000365668 141 ntBASIC5.41□□□□□ -1.54
CDH3P22223 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC5.41□□□□□ -1.54
CDH3P22223 AL672167.2-201ENST00000377164 879 ntBASIC5.41□□□□□ -1.54
CDH3P22223 SNORA70.6-201ENST00000383934 134 ntBASIC5.41□□□□□ -1.54
CDH3P22223 RN7SKP279-201ENST00000411383 298 ntBASIC5.41□□□□□ -1.54
CDH3P22223 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC5.41□□□□□ -1.54
CDH3P22223 RPL12P43-201ENST00000420608 499 ntBASIC5.41□□□□□ -1.54
CDH3P22223 TMEM183AP1-205ENST00000432739 290 ntBASIC5.41□□□□□ -1.54
CDH3P22223 AC012075.1-201ENST00000436549 580 ntBASIC5.41□□□□□ -1.54
CDH3P22223 AL390119.1-201ENST00000440329 312 ntBASIC5.41□□□□□ -1.54
CDH3P22223 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.41□□□□□ -1.54
CDH3P22223 AC074386.1-201ENST00000476560 767 ntBASIC5.41□□□□□ -1.54
CDH3P22223 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.41□□□□□ -1.54
CDH3P22223 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC5.41□□□□□ -1.54
CDH3P22223 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.41□□□□□ -1.54
CDH3P22223 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.41□□□□□ -1.54
CDH3P22223 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
CDH3P22223 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.41□□□□□ -1.54
CDH3P22223 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
CDH3P22223 OR10D4P-201ENST00000525892 951 ntBASIC5.41□□□□□ -1.54
CDH3P22223 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.41□□□□□ -1.54
CDH3P22223 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.41□□□□□ -1.54
CDH3P22223 AC015720.2-201ENST00000567709 334 ntBASIC5.41□□□□□ -1.54
CDH3P22223 MIR4472-2-201ENST00000582069 67 ntBASIC5.41□□□□□ -1.54
CDH3P22223 NPM1P45-201ENST00000583151 559 ntBASIC5.41□□□□□ -1.54
CDH3P22223 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.41□□□□□ -1.54
CDH3P22223 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.41□□□□□ -1.54
CDH3P22223 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.41□□□□□ -1.54
CDH3P22223 OR7M1P-201ENST00000608946 533 ntBASIC5.41□□□□□ -1.54
CDH3P22223 AC022467.1-201ENST00000614738 749 ntBASIC5.41□□□□□ -1.54
CDH3P22223 MIR6133-201ENST00000617057 108 ntBASIC5.41□□□□□ -1.54
CDH3P22223 AL035661.1-201ENST00000620459 1144 ntBASIC5.41□□□□□ -1.54
CDH3P22223 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
CDH3P22223 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
CDH3P22223 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.41□□□□□ -1.54
CDH3P22223 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
CDH3P22223 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CDH3P22223 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CDH3P22223 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CDH3P22223 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
CDH3P22223 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CDH3P22223 TRIM51GP-201ENST00000534741 1350 ntBASIC5.41□□□□□ -1.54
CDH3P22223 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CDH3P22223 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
CDH3P22223 AC011933.2-201ENST00000578539 2790 ntBASIC5.4□□□□□ -1.54
CDH3P22223 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
CDH3P22223 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.4□□□□□ -1.54
CDH3P22223 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.4□□□□□ -1.54
CDH3P22223 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
CDH3P22223 RN7SKP160-201ENST00000363804 340 ntBASIC5.4□□□□□ -1.54
CDH3P22223 RN7SKP28-201ENST00000364770 305 ntBASIC5.4□□□□□ -1.54
CDH3P22223 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CDH3P22223 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.4□□□□□ -1.54
CDH3P22223 AL391422.1-201ENST00000402155 436 ntBASIC5.4□□□□□ -1.54
CDH3P22223 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.4□□□□□ -1.54
CDH3P22223 RNGTTP1-201ENST00000420965 728 ntBASIC5.4□□□□□ -1.54
CDH3P22223 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.4□□□□□ -1.54
CDH3P22223 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.4□□□□□ -1.54
CDH3P22223 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.4□□□□□ -1.54
CDH3P22223 AL450023.1-201ENST00000450868 751 ntBASIC5.4□□□□□ -1.54
CDH3P22223 AL513343.1-201ENST00000451818 792 ntBASIC5.4□□□□□ -1.54
CDH3P22223 VDAC2P4-201ENST00000452925 711 ntBASIC5.4□□□□□ -1.54
CDH3P22223 RPL12P39-201ENST00000455456 496 ntBASIC5.4□□□□□ -1.54
CDH3P22223 TPRKBP1-201ENST00000456243 481 ntBASIC5.4□□□□□ -1.54
CDH3P22223 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.4□□□□□ -1.54
CDH3P22223 RN7SL51P-201ENST00000468230 285 ntBASIC5.4□□□□□ -1.54
CDH3P22223 SIAH1P1-201ENST00000479411 923 ntBASIC5.4□□□□□ -1.54
CDH3P22223 PDCL3P4-201ENST00000489621 720 ntBASIC5.4□□□□□ -1.54
CDH3P22223 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC5.4□□□□□ -1.54
CDH3P22223 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.4□□□□□ -1.54
CDH3P22223 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.4□□□□□ -1.54
CDH3P22223 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC5.4□□□□□ -1.54
CDH3P22223 AC139697.1-201ENST00000548429 745 ntBASIC5.4□□□□□ -1.54
CDH3P22223 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.4□□□□□ -1.54
CDH3P22223 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC5.4□□□□□ -1.54
CDH3P22223 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.4□□□□□ -1.54
CDH3P22223 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC5.4□□□□□ -1.54
CDH3P22223 AC020915.5-201ENST00000596836 964 ntBASIC5.4□□□□□ -1.54
CDH3P22223 AC022387.2-201ENST00000604050 448 ntBASIC5.4□□□□□ -1.54
CDH3P22223 AP000864.1-201ENST00000609424 650 ntBASIC5.4□□□□□ -1.54
CDH3P22223 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.4□□□□□ -1.54
CDH3P22223 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
CDH3P22223 AL139254.3-201ENST00000641097 674 ntBASIC5.4□□□□□ -1.54
CDH3P22223 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
CDH3P22223 CUL4AP1-201ENST00000514750 1863 ntBASIC5.4□□□□□ -1.55
CDH3P22223 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CDH3P22223 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
CDH3P22223 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.4□□□□□ -1.55
CDH3P22223 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.4□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms