Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 FAM41AY2-201ENST00000458627 906 ntTSL 5 BASIC6.1□□□□□ -1.43
ATF4P18848 CDKN2AIPNLP1-201ENST00000460287 302 ntBASIC6.1□□□□□ -1.43
ATF4P18848 RN7SL325P-201ENST00000460434 283 ntBASIC6.1□□□□□ -1.43
ATF4P18848 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC6.1□□□□□ -1.43
ATF4P18848 RPS6P25-201ENST00000464444 748 ntBASIC6.1□□□□□ -1.43
ATF4P18848 RN7SL862P-201ENST00000491550 298 ntBASIC6.1□□□□□ -1.43
ATF4P18848 MYADML-203ENST00000491596 951 ntBASIC6.1□□□□□ -1.43
ATF4P18848 PAQR9-AS1-202ENST00000493825 576 ntTSL 2 BASIC6.1□□□□□ -1.43
ATF4P18848 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC6.1□□□□□ -1.43
ATF4P18848 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC6.1□□□□□ -1.43
ATF4P18848 NACAP6-201ENST00000509572 622 ntBASIC6.1□□□□□ -1.43
ATF4P18848 AC109464.2-201ENST00000510242 943 ntBASIC6.1□□□□□ -1.43
ATF4P18848 AC104123.1-203ENST00000513158 575 ntTSL 3 BASIC6.1□□□□□ -1.43
ATF4P18848 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC6.1□□□□□ -1.43
ATF4P18848 AC025881.1-201ENST00000518851 512 ntBASIC6.1□□□□□ -1.43
ATF4P18848 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.1□□□□□ -1.43
ATF4P18848 AL135934.1-201ENST00000527684 537 ntTSL 2 BASIC6.1□□□□□ -1.43
ATF4P18848 ZNF705CP-201ENST00000530515 889 ntBASIC6.1□□□□□ -1.43
ATF4P18848 AC007751.2-201ENST00000534173 291 ntBASIC6.1□□□□□ -1.43
ATF4P18848 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
ATF4P18848 MRPL40P1-201ENST00000542687 604 ntBASIC6.1□□□□□ -1.43
ATF4P18848 OR6C73P-201ENST00000546432 358 ntBASIC6.1□□□□□ -1.43
ATF4P18848 AC048344.2-201ENST00000547280 147 ntBASIC6.1□□□□□ -1.43
ATF4P18848 AC011611.6-201ENST00000547483 255 ntBASIC6.1□□□□□ -1.43
ATF4P18848 AC008127.2-201ENST00000549925 1075 ntBASIC6.1□□□□□ -1.43
ATF4P18848 COPZ1-215ENST00000552362 575 ntTSL 4 BASIC6.1□□□□□ -1.43
ATF4P18848 AC233290.2-201ENST00000552852 390 ntBASIC6.1□□□□□ -1.43
ATF4P18848 AC037479.1-201ENST00000558361 625 ntBASIC6.1□□□□□ -1.43
ATF4P18848 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC6.1□□□□□ -1.43
ATF4P18848 AC091489.2-201ENST00000566263 604 ntBASIC6.1□□□□□ -1.43
ATF4P18848 AC141257.3-201ENST00000572906 215 ntBASIC6.1□□□□□ -1.43
ATF4P18848 MIR5095-201ENST00000578844 88 ntBASIC6.1□□□□□ -1.43
ATF4P18848 JPT1-211ENST00000581874 517 ntTSL 5 BASIC6.1□□□□□ -1.43
ATF4P18848 SYPL1P2-201ENST00000582878 727 ntBASIC6.1□□□□□ -1.43
ATF4P18848 ZNF473-209ENST00000601364 603 ntTSL 3 BASIC6.1□□□□□ -1.43
ATF4P18848 AL121917.2-201ENST00000605044 390 ntBASIC6.1□□□□□ -1.43
ATF4P18848 AL356052.1-201ENST00000605764 376 ntBASIC6.1□□□□□ -1.43
ATF4P18848 U1.22-201ENST00000605806 164 ntBASIC6.1□□□□□ -1.43
ATF4P18848 HSPE1P14-201ENST00000605812 302 ntBASIC6.1□□□□□ -1.43
ATF4P18848 AC000068.3-201ENST00000607934 427 ntBASIC6.1□□□□□ -1.43
ATF4P18848 AP003481.1-202ENST00000608214 503 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
ATF4P18848 AC078899.5-201ENST00000612475 178 ntBASIC6.1□□□□□ -1.43
ATF4P18848 AC092794.1-201ENST00000612734 582 ntBASIC6.1□□□□□ -1.43
ATF4P18848 RN7SL820P-201ENST00000616437 299 ntBASIC6.1□□□□□ -1.43
ATF4P18848 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC6.1□□□□□ -1.43
ATF4P18848 AC091932.2-201ENST00000623014 291 ntBASIC6.1□□□□□ -1.43
ATF4P18848 AC048380.3-201ENST00000623145 796 ntBASIC6.1□□□□□ -1.43
ATF4P18848 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC6.1□□□□□ -1.43
ATF4P18848 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC6.1□□□□□ -1.43
ATF4P18848 WDR11-AS1-207ENST00000630905 769 ntTSL 2 BASIC6.1□□□□□ -1.43
ATF4P18848 AL359834.1-201ENST00000635660 638 ntTSL 4 BASIC6.1□□□□□ -1.43
ATF4P18848 CLEC19A-205ENST00000636231 561 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
ATF4P18848 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
ATF4P18848 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC6.1□□□□□ -1.43
ATF4P18848 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
ATF4P18848 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.1□□□□□ -1.43
ATF4P18848 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
ATF4P18848 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.1□□□□□ -1.43
ATF4P18848 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
ATF4P18848 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.1□□□□□ -1.43
ATF4P18848 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
ATF4P18848 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC6.1□□□□□ -1.43
ATF4P18848 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
ATF4P18848 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC6.09□□□□□ -1.43
ATF4P18848 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
ATF4P18848 PANDAR-201ENST00000629595 1506 ntBASIC6.09□□□□□ -1.43
ATF4P18848 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
ATF4P18848 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
ATF4P18848 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
ATF4P18848 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
ATF4P18848 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC6.09□□□□□ -1.43
ATF4P18848 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
ATF4P18848 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC6.09□□□□□ -1.43
ATF4P18848 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.09□□□□□ -1.43
ATF4P18848 AL513523.1-201ENST00000417868 1309 ntBASIC6.09□□□□□ -1.43
ATF4P18848 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
ATF4P18848 IL22-201ENST00000328087 1150 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
ATF4P18848 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
ATF4P18848 GSTM1-203ENST00000369819 790 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
ATF4P18848 FHL1-203ENST00000370676 833 ntTSL 5 BASIC6.09□□□□□ -1.43
ATF4P18848 CREM-213ENST00000374734 711 ntTSL 5 BASIC6.09□□□□□ -1.43
ATF4P18848 RACK1-201ENST00000376817 965 ntTSL 5 BASIC6.09□□□□□ -1.43
ATF4P18848 AL121972.1-201ENST00000402023 252 ntBASIC6.09□□□□□ -1.43
ATF4P18848 MORN2-202ENST00000409077 465 ntTSL 5 BASIC6.09□□□□□ -1.43
ATF4P18848 UNC50-203ENST00000409347 1276 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
ATF4P18848 RN7SKP26-201ENST00000410247 293 ntBASIC6.09□□□□□ -1.43
ATF4P18848 RPE-204ENST00000411934 792 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
ATF4P18848 FCF1P9-201ENST00000412546 282 ntBASIC6.09□□□□□ -1.43
ATF4P18848 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC6.09□□□□□ -1.43
ATF4P18848 TMSB10P1-201ENST00000415070 132 ntBASIC6.09□□□□□ -1.43
ATF4P18848 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC6.09□□□□□ -1.43
ATF4P18848 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC6.09□□□□□ -1.43
ATF4P18848 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC6.09□□□□□ -1.43
ATF4P18848 RPL37P21-201ENST00000435890 276 ntBASIC6.09□□□□□ -1.43
ATF4P18848 MIATNB-204ENST00000437071 1006 ntTSL 3 BASIC6.09□□□□□ -1.43
ATF4P18848 AC005077.3-202ENST00000437494 300 ntTSL 3 BASIC6.09□□□□□ -1.43
ATF4P18848 LINC01015-204ENST00000445296 399 ntTSL 3 BASIC6.09□□□□□ -1.43
ATF4P18848 EEF1A1P1-201ENST00000447052 739 ntBASIC6.09□□□□□ -1.43
ATF4P18848 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC6.09□□□□□ -1.43
ATF4P18848 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms