Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
COL11A1P12107 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.75□□□□□ -1.49
COL11A1P12107 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
COL11A1P12107 RNA5SP223-201ENST00000365174 120 ntBASIC5.75□□□□□ -1.49
COL11A1P12107 SNORA11-201ENST00000408789 128 ntBASIC5.75□□□□□ -1.49
COL11A1P12107 RN7SKP114-201ENST00000410327 279 ntBASIC5.75□□□□□ -1.49
COL11A1P12107 AC017019.1-201ENST00000426129 261 ntBASIC5.75□□□□□ -1.49
COL11A1P12107 OR2B7P-201ENST00000429302 934 ntBASIC5.75□□□□□ -1.49
COL11A1P12107 NDUFB4P8-201ENST00000435351 367 ntBASIC5.75□□□□□ -1.49
COL11A1P12107 SLC25A18P1-201ENST00000449385 454 ntBASIC5.75□□□□□ -1.49
COL11A1P12107 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC5.75□□□□□ -1.49
COL11A1P12107 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC5.75□□□□□ -1.49
COL11A1P12107 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC5.75□□□□□ -1.49
COL11A1P12107 MIR5096-201ENST00000583713 70 ntBASIC5.75□□□□□ -1.49
COL11A1P12107 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
COL11A1P12107 AC012618.3-205ENST00000637896 1496 ntBASIC5.75□□□□□ -1.49
COL11A1P12107 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
COL11A1P12107 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
COL11A1P12107 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.75□□□□□ -1.49
COL11A1P12107 AC104581.5-201ENST00000624171 7141 ntBASIC5.75□□□□□ -1.49
COL11A1P12107 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.75□□□□□ -1.49
COL11A1P12107 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
COL11A1P12107 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
COL11A1P12107 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
COL11A1P12107 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
COL11A1P12107 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
COL11A1P12107 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.74□□□□□ -1.49
COL11A1P12107 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.74□□□□□ -1.49
COL11A1P12107 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
COL11A1P12107 AC079741.1-201ENST00000321498 212 ntBASIC5.74□□□□□ -1.49
COL11A1P12107 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
COL11A1P12107 NUDT19P3-201ENST00000404698 555 ntBASIC5.74□□□□□ -1.49
COL11A1P12107 OR51B3P-201ENST00000412287 913 ntBASIC5.74□□□□□ -1.49
COL11A1P12107 AL513533.1-201ENST00000453728 415 ntBASIC5.74□□□□□ -1.49
COL11A1P12107 HMGB1P4-201ENST00000455362 567 ntBASIC5.74□□□□□ -1.49
COL11A1P12107 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.74□□□□□ -1.49
COL11A1P12107 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC5.74□□□□□ -1.49
COL11A1P12107 PRELID3BP5-201ENST00000508612 460 ntBASIC5.74□□□□□ -1.49
COL11A1P12107 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.74□□□□□ -1.49
COL11A1P12107 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.74□□□□□ -1.49
COL11A1P12107 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.74□□□□□ -1.49
COL11A1P12107 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.74□□□□□ -1.49
COL11A1P12107 MTCYBP13-201ENST00000578634 1093 ntBASIC5.74□□□□□ -1.49
COL11A1P12107 AC068790.4-201ENST00000602474 263 ntBASIC5.74□□□□□ -1.49
COL11A1P12107 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
COL11A1P12107 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
COL11A1P12107 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.74□□□□□ -1.49
COL11A1P12107 AC010401.2-201ENST00000575137 4934 ntBASIC5.74□□□□□ -1.49
COL11A1P12107 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
COL11A1P12107 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.74□□□□□ -1.49
COL11A1P12107 DHX40P1-201ENST00000588725 1412 ntBASIC5.74□□□□□ -1.49
COL11A1P12107 AC010928.1-201ENST00000592477 1447 ntBASIC5.74□□□□□ -1.49
COL11A1P12107 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
COL11A1P12107 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.74□□□□□ -1.49
COL11A1P12107 RNA5SP191-201ENST00000362585 102 ntBASIC5.74□□□□□ -1.49
COL11A1P12107 RN7SKP153-201ENST00000365026 316 ntBASIC5.74□□□□□ -1.49
COL11A1P12107 AC004074.1-201ENST00000421810 1063 ntBASIC5.74□□□□□ -1.49
COL11A1P12107 AC007559.1-201ENST00000428736 355 ntBASIC5.74□□□□□ -1.49
COL11A1P12107 RPS29P9-201ENST00000440360 171 ntBASIC5.74□□□□□ -1.49
COL11A1P12107 TPT1P13-201ENST00000449760 499 ntBASIC5.74□□□□□ -1.49
COL11A1P12107 OR52J1P-201ENST00000450596 932 ntBASIC5.74□□□□□ -1.49
COL11A1P12107 NDUFA12P1-201ENST00000455914 406 ntBASIC5.74□□□□□ -1.49
COL11A1P12107 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
COL11A1P12107 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.74□□□□□ -1.49
COL11A1P12107 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.74□□□□□ -1.49
COL11A1P12107 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC5.74□□□□□ -1.49
COL11A1P12107 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC5.74□□□□□ -1.49
COL11A1P12107 AL049839.1-201ENST00000556151 657 ntBASIC5.74□□□□□ -1.49
COL11A1P12107 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
COL11A1P12107 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
COL11A1P12107 MIR4420-201ENST00000583944 77 ntBASIC5.74□□□□□ -1.49
COL11A1P12107 AC020910.3-201ENST00000603701 874 ntBASIC5.74□□□□□ -1.49
COL11A1P12107 MIR6780A-201ENST00000615089 68 ntBASIC5.74□□□□□ -1.49
COL11A1P12107 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.74□□□□□ -1.49
COL11A1P12107 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.74□□□□□ -1.49
COL11A1P12107 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.74□□□□□ -1.49
COL11A1P12107 ECM1P2-201ENST00000503354 1577 ntBASIC5.73□□□□□ -1.49
COL11A1P12107 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.73□□□□□ -1.49
COL11A1P12107 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
COL11A1P12107 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
COL11A1P12107 MSL3P1-202ENST00000440028 1468 ntBASIC5.73□□□□□ -1.49
COL11A1P12107 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC5.73□□□□□ -1.49
COL11A1P12107 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
COL11A1P12107 RPS4XP9-201ENST00000405151 780 ntBASIC5.73□□□□□ -1.49
COL11A1P12107 AC138761.5-201ENST00000433967 325 ntBASIC5.73□□□□□ -1.49
COL11A1P12107 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC5.73□□□□□ -1.49
COL11A1P12107 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC5.73□□□□□ -1.49
COL11A1P12107 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.73□□□□□ -1.49
COL11A1P12107 SCARNA22-201ENST00000503991 125 ntBASIC5.73□□□□□ -1.49
COL11A1P12107 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC5.73□□□□□ -1.49
COL11A1P12107 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.73□□□□□ -1.49
COL11A1P12107 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.73□□□□□ -1.49
COL11A1P12107 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.73□□□□□ -1.49
COL11A1P12107 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
COL11A1P12107 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.73□□□□□ -1.49
COL11A1P12107 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
COL11A1P12107 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
COL11A1P12107 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
COL11A1P12107 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC5.73□□□□□ -1.49
COL11A1P12107 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms