Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC3.97□□□□□ -1.77
CXCL1P09341 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CXCL1P09341 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC3.97□□□□□ -1.77
CXCL1P09341 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CXCL1P09341 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC3.97□□□□□ -1.77
CXCL1P09341 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC3.97□□□□□ -1.77
CXCL1P09341 IGBP1P1-201ENST00000554337 1009 ntBASIC3.97□□□□□ -1.77
CXCL1P09341 RPL21P7-201ENST00000557463 483 ntBASIC3.97□□□□□ -1.77
CXCL1P09341 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC3.97□□□□□ -1.77
CXCL1P09341 AL034374.2-201ENST00000605281 548 ntBASIC3.97□□□□□ -1.77
CXCL1P09341 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC3.97□□□□□ -1.77
CXCL1P09341 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC3.97□□□□□ -1.77
CXCL1P09341 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CXCL1P09341 AC139713.2-215ENST00000641428 5037 ntBASIC3.97□□□□□ -1.77
CXCL1P09341 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC3.97□□□□□ -1.77
CXCL1P09341 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CXCL1P09341 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
CXCL1P09341 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CXCL1P09341 RN7SKP6-201ENST00000364795 319 ntBASIC3.96□□□□□ -1.78
CXCL1P09341 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
CXCL1P09341 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
CXCL1P09341 GCNT1P4-201ENST00000404096 329 ntBASIC3.96□□□□□ -1.78
CXCL1P09341 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC3.96□□□□□ -1.78
CXCL1P09341 AL035660.1-201ENST00000422041 222 ntBASIC3.96□□□□□ -1.78
CXCL1P09341 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC3.96□□□□□ -1.78
CXCL1P09341 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC3.96□□□□□ -1.78
CXCL1P09341 CEACAMP11-201ENST00000455211 583 ntBASIC3.96□□□□□ -1.78
CXCL1P09341 CST12P-201ENST00000457644 362 ntBASIC3.96□□□□□ -1.78
CXCL1P09341 AC068228.1-201ENST00000461723 211 ntBASIC3.96□□□□□ -1.78
CXCL1P09341 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC3.96□□□□□ -1.78
CXCL1P09341 RBBP4P1-201ENST00000502424 1276 ntBASIC3.96□□□□□ -1.78
CXCL1P09341 AC112484.3-201ENST00000505910 329 ntBASIC3.96□□□□□ -1.78
CXCL1P09341 AC113430.1-201ENST00000506872 718 ntBASIC3.96□□□□□ -1.78
CXCL1P09341 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC3.96□□□□□ -1.78
CXCL1P09341 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC3.96□□□□□ -1.78
CXCL1P09341 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC3.96□□□□□ -1.78
CXCL1P09341 HMGB1P42-201ENST00000532126 553 ntBASIC3.96□□□□□ -1.78
CXCL1P09341 OR4A41P-201ENST00000533053 928 ntBASIC3.96□□□□□ -1.78
CXCL1P09341 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC3.96□□□□□ -1.78
CXCL1P09341 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC3.96□□□□□ -1.78
CXCL1P09341 AL049830.4-201ENST00000555149 351 ntBASIC3.96□□□□□ -1.78
CXCL1P09341 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC3.96□□□□□ -1.78
CXCL1P09341 DPPA2P4-201ENST00000563717 878 ntBASIC3.96□□□□□ -1.78
CXCL1P09341 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC3.96□□□□□ -1.78
CXCL1P09341 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC3.96□□□□□ -1.78
CXCL1P09341 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC3.96□□□□□ -1.78
CXCL1P09341 AC124916.2-201ENST00000604416 224 ntBASIC3.96□□□□□ -1.78
CXCL1P09341 PPATP2-201ENST00000605635 508 ntBASIC3.96□□□□□ -1.78
CXCL1P09341 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC3.96□□□□□ -1.78
CXCL1P09341 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC3.96□□□□□ -1.78
CXCL1P09341 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CXCL1P09341 TTC39DP-201ENST00000416781 1688 ntBASIC3.96□□□□□ -1.78
CXCL1P09341 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CXCL1P09341 AC027279.1-201ENST00000568885 4284 ntBASIC3.96□□□□□ -1.78
CXCL1P09341 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC3.96□□□□□ -1.78
CXCL1P09341 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CXCL1P09341 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
CXCL1P09341 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC3.96□□□□□ -1.78
CXCL1P09341 AC107068.1-201ENST00000563286 4218 ntBASIC3.96□□□□□ -1.78
CXCL1P09341 MAPK10-320ENST00000641462 6696 ntBASIC3.96□□□□□ -1.78
CXCL1P09341 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CXCL1P09341 CASC19-206ENST00000641028 1430 ntBASIC3.95□□□□□ -1.78
CXCL1P09341 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CXCL1P09341 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CXCL1P09341 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
CXCL1P09341 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
CXCL1P09341 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC3.95□□□□□ -1.78
CXCL1P09341 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CXCL1P09341 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CXCL1P09341 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CXCL1P09341 COX6B1P3-201ENST00000312310 260 ntBASIC3.95□□□□□ -1.78
CXCL1P09341 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC3.95□□□□□ -1.78
CXCL1P09341 MIR1203-201ENST00000408812 85 ntBASIC3.95□□□□□ -1.78
CXCL1P09341 RN7SKP86-201ENST00000410454 332 ntBASIC3.95□□□□□ -1.78
CXCL1P09341 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC3.95□□□□□ -1.78
CXCL1P09341 AC004448.2-201ENST00000422360 586 ntBASIC3.95□□□□□ -1.78
CXCL1P09341 AL139158.1-201ENST00000424719 340 ntBASIC3.95□□□□□ -1.78
CXCL1P09341 NAP1L4P2-201ENST00000425958 899 ntBASIC3.95□□□□□ -1.78
CXCL1P09341 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC3.95□□□□□ -1.78
CXCL1P09341 OR6D1P-201ENST00000436165 939 ntBASIC3.95□□□□□ -1.78
CXCL1P09341 NDUFS5P5-201ENST00000437256 321 ntBASIC3.95□□□□□ -1.78
CXCL1P09341 RPS26P2-201ENST00000440331 348 ntBASIC3.95□□□□□ -1.78
CXCL1P09341 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC3.95□□□□□ -1.78
CXCL1P09341 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC3.95□□□□□ -1.78
CXCL1P09341 AC068491.1-201ENST00000449539 1241 ntBASIC3.95□□□□□ -1.78
CXCL1P09341 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC3.95□□□□□ -1.78
CXCL1P09341 AC010469.1-201ENST00000463864 576 ntBASIC3.95□□□□□ -1.78
CXCL1P09341 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
CXCL1P09341 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC3.95□□□□□ -1.78
CXCL1P09341 RNA5SP340-201ENST00000517132 107 ntBASIC3.95□□□□□ -1.78
CXCL1P09341 MRPS16P1-201ENST00000523462 412 ntBASIC3.95□□□□□ -1.78
CXCL1P09341 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC3.95□□□□□ -1.78
CXCL1P09341 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CXCL1P09341 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC3.95□□□□□ -1.78
CXCL1P09341 MED21-206ENST00000546323 575 ntTSL 3 BASIC3.95□□□□□ -1.78
CXCL1P09341 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CXCL1P09341 RPL27-207ENST00000590864 569 ntTSL 2 BASIC3.95□□□□□ -1.78
CXCL1P09341 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC3.95□□□□□ -1.78
CXCL1P09341 uc_338.29-201ENST00000615099 168 ntBASIC3.95□□□□□ -1.78
CXCL1P09341 AC074140.1-201ENST00000621617 208 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms