Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.17□□□□□ -1.58
HLA-DQB2P05538 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
HLA-DQB2P05538 RN7SKP113-201ENST00000363891 295 ntBASIC5.17□□□□□ -1.58
HLA-DQB2P05538 AL353625.1-202ENST00000366273 571 ntBASIC5.17□□□□□ -1.58
HLA-DQB2P05538 RNU1-106P-201ENST00000384382 164 ntBASIC5.17□□□□□ -1.58
HLA-DQB2P05538 U3.23-201ENST00000391132 200 ntBASIC5.17□□□□□ -1.58
HLA-DQB2P05538 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC5.17□□□□□ -1.58
HLA-DQB2P05538 RN7SL629P-201ENST00000489622 285 ntBASIC5.17□□□□□ -1.58
HLA-DQB2P05538 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.17□□□□□ -1.58
HLA-DQB2P05538 RNA5SP230-201ENST00000517039 122 ntBASIC5.17□□□□□ -1.58
HLA-DQB2P05538 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.17□□□□□ -1.58
HLA-DQB2P05538 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HLA-DQB2P05538 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.17□□□□□ -1.58
HLA-DQB2P05538 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.17□□□□□ -1.58
HLA-DQB2P05538 MIR4660-201ENST00000583549 74 ntBASIC5.17□□□□□ -1.58
HLA-DQB2P05538 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.17□□□□□ -1.58
HLA-DQB2P05538 AC018695.5-201ENST00000605872 315 ntBASIC5.17□□□□□ -1.58
HLA-DQB2P05538 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC5.17□□□□□ -1.58
HLA-DQB2P05538 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HLA-DQB2P05538 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.17□□□□□ -1.58
HLA-DQB2P05538 AL355480.1-201ENST00000629041 99 ntBASIC5.17□□□□□ -1.58
HLA-DQB2P05538 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.17□□□□□ -1.58
HLA-DQB2P05538 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HLA-DQB2P05538 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.17□□□□□ -1.58
HLA-DQB2P05538 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HLA-DQB2P05538 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.17□□□□□ -1.58
HLA-DQB2P05538 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HLA-DQB2P05538 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HLA-DQB2P05538 AC114947.2-201ENST00000565748 2125 ntBASIC5.17□□□□□ -1.58
HLA-DQB2P05538 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
HLA-DQB2P05538 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HLA-DQB2P05538 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.16□□□□□ -1.58
HLA-DQB2P05538 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HLA-DQB2P05538 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.16□□□□□ -1.58
HLA-DQB2P05538 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
HLA-DQB2P05538 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HLA-DQB2P05538 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.16□□□□□ -1.58
HLA-DQB2P05538 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
HLA-DQB2P05538 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.16□□□□□ -1.58
HLA-DQB2P05538 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HLA-DQB2P05538 SNURFL-201ENST00000309296 343 ntBASIC5.16□□□□□ -1.58
HLA-DQB2P05538 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.16□□□□□ -1.58
HLA-DQB2P05538 SNORA77-201ENST00000408716 125 ntBASIC5.16□□□□□ -1.58
HLA-DQB2P05538 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.16□□□□□ -1.58
HLA-DQB2P05538 COX6CP13-201ENST00000428703 226 ntBASIC5.16□□□□□ -1.58
HLA-DQB2P05538 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.16□□□□□ -1.58
HLA-DQB2P05538 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.16□□□□□ -1.58
HLA-DQB2P05538 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.16□□□□□ -1.58
HLA-DQB2P05538 RPL34P20-201ENST00000442771 351 ntBASIC5.16□□□□□ -1.58
HLA-DQB2P05538 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.16□□□□□ -1.58
HLA-DQB2P05538 AC097484.1-201ENST00000471148 389 ntBASIC5.16□□□□□ -1.58
HLA-DQB2P05538 AC090114.3-201ENST00000479267 829 ntBASIC5.16□□□□□ -1.58
HLA-DQB2P05538 AC010350.1-201ENST00000504908 231 ntBASIC5.16□□□□□ -1.58
HLA-DQB2P05538 AC006499.3-201ENST00000506077 748 ntBASIC5.16□□□□□ -1.58
HLA-DQB2P05538 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.16□□□□□ -1.58
HLA-DQB2P05538 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.16□□□□□ -1.58
HLA-DQB2P05538 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.16□□□□□ -1.58
HLA-DQB2P05538 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
HLA-DQB2P05538 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.16□□□□□ -1.58
HLA-DQB2P05538 AC019322.1-201ENST00000571869 389 ntBASIC5.16□□□□□ -1.58
HLA-DQB2P05538 MIR3691-201ENST00000578066 90 ntBASIC5.16□□□□□ -1.58
HLA-DQB2P05538 AC127024.5-201ENST00000580085 462 ntBASIC5.16□□□□□ -1.58
HLA-DQB2P05538 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.16□□□□□ -1.58
HLA-DQB2P05538 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
HLA-DQB2P05538 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.16□□□□□ -1.58
HLA-DQB2P05538 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HLA-DQB2P05538 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HLA-DQB2P05538 AC073136.1-201ENST00000449426 2884 ntBASIC5.16□□□□□ -1.58
HLA-DQB2P05538 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
HLA-DQB2P05538 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.16□□□□□ -1.58
HLA-DQB2P05538 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
HLA-DQB2P05538 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HLA-DQB2P05538 C4BPAP1-201ENST00000415474 1893 ntBASIC5.15□□□□□ -1.58
HLA-DQB2P05538 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.15□□□□□ -1.58
HLA-DQB2P05538 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
HLA-DQB2P05538 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
HLA-DQB2P05538 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
HLA-DQB2P05538 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.15□□□□□ -1.58
HLA-DQB2P05538 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
HLA-DQB2P05538 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
HLA-DQB2P05538 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
HLA-DQB2P05538 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.15□□□□□ -1.58
HLA-DQB2P05538 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
HLA-DQB2P05538 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
HLA-DQB2P05538 U8.4-201ENST00000363626 134 ntBASIC5.15□□□□□ -1.59
HLA-DQB2P05538 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
HLA-DQB2P05538 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.15□□□□□ -1.59
HLA-DQB2P05538 RHOT1P3-201ENST00000436571 331 ntBASIC5.15□□□□□ -1.59
HLA-DQB2P05538 EEF1B2P5-201ENST00000444820 548 ntBASIC5.15□□□□□ -1.59
HLA-DQB2P05538 KNOP1P3-201ENST00000446933 426 ntBASIC5.15□□□□□ -1.59
HLA-DQB2P05538 RN7SL799P-201ENST00000475891 298 ntBASIC5.15□□□□□ -1.59
HLA-DQB2P05538 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC5.15□□□□□ -1.59
HLA-DQB2P05538 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC5.15□□□□□ -1.59
HLA-DQB2P05538 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.15□□□□□ -1.59
HLA-DQB2P05538 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.15□□□□□ -1.59
HLA-DQB2P05538 AC022832.1-201ENST00000530718 645 ntBASIC5.15□□□□□ -1.59
HLA-DQB2P05538 AC006349.1-201ENST00000555526 235 ntBASIC5.15□□□□□ -1.59
HLA-DQB2P05538 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.15□□□□□ -1.59
HLA-DQB2P05538 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.15□□□□□ -1.59
HLA-DQB2P05538 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms