Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 AC244107.2-201ENST00000611773 76 ntBASIC5.76□□□□□ -1.49
CHRNA1P02708 AC091905.4-201ENST00000623432 202 ntBASIC5.76□□□□□ -1.49
CHRNA1P02708 MTCO1P1-201ENST00000624263 1081 ntBASIC5.76□□□□□ -1.49
CHRNA1P02708 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CHRNA1P02708 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
CHRNA1P02708 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
CHRNA1P02708 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
CHRNA1P02708 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CHRNA1P02708 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.75□□□□□ -1.49
CHRNA1P02708 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CHRNA1P02708 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CHRNA1P02708 AC093671.1-201ENST00000624981 2929 ntBASIC5.75□□□□□ -1.49
CHRNA1P02708 AC006484.1-201ENST00000435086 1884 ntBASIC5.75□□□□□ -1.49
CHRNA1P02708 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.75□□□□□ -1.49
CHRNA1P02708 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
CHRNA1P02708 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
CHRNA1P02708 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CHRNA1P02708 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CHRNA1P02708 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
CHRNA1P02708 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CHRNA1P02708 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CHRNA1P02708 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
CHRNA1P02708 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
CHRNA1P02708 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
CHRNA1P02708 PPIAP9-201ENST00000403866 498 ntBASIC5.75□□□□□ -1.49
CHRNA1P02708 AC009506.2-201ENST00000420635 840 ntBASIC5.75□□□□□ -1.49
CHRNA1P02708 AL360081.1-201ENST00000428299 555 ntBASIC5.75□□□□□ -1.49
CHRNA1P02708 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.75□□□□□ -1.49
CHRNA1P02708 RHOT1P3-201ENST00000436571 331 ntBASIC5.75□□□□□ -1.49
CHRNA1P02708 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC5.75□□□□□ -1.49
CHRNA1P02708 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC5.75□□□□□ -1.49
CHRNA1P02708 AC090142.2-201ENST00000483263 416 ntBASIC5.75□□□□□ -1.49
CHRNA1P02708 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CHRNA1P02708 PCNPP1-201ENST00000552501 511 ntBASIC5.75□□□□□ -1.49
CHRNA1P02708 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.75□□□□□ -1.49
CHRNA1P02708 MIR4691-201ENST00000583764 85 ntBASIC5.75□□□□□ -1.49
CHRNA1P02708 AC005084.1-201ENST00000605160 304 ntBASIC5.75□□□□□ -1.49
CHRNA1P02708 EIF3FP1-201ENST00000613970 806 ntBASIC5.75□□□□□ -1.49
CHRNA1P02708 AC087385.3-201ENST00000620477 187 ntBASIC5.75□□□□□ -1.49
CHRNA1P02708 AC099654.6-201ENST00000636487 512 ntBASIC5.75□□□□□ -1.49
CHRNA1P02708 MIPEPP2-201ENST00000422560 1819 ntBASIC5.75□□□□□ -1.49
CHRNA1P02708 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
CHRNA1P02708 AP005432.1-201ENST00000580891 3485 ntBASIC5.75□□□□□ -1.49
CHRNA1P02708 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CHRNA1P02708 CASC19-221ENST00000641309 1382 ntBASIC5.75□□□□□ -1.49
CHRNA1P02708 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
CHRNA1P02708 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CHRNA1P02708 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.75□□□□□ -1.49
CHRNA1P02708 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
CHRNA1P02708 AC100757.1-201ENST00000616872 1835 ntBASIC5.74□□□□□ -1.49
CHRNA1P02708 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
CHRNA1P02708 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CHRNA1P02708 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.74□□□□□ -1.49
CHRNA1P02708 AC003973.3-201ENST00000624863 2822 ntBASIC5.74□□□□□ -1.49
CHRNA1P02708 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
CHRNA1P02708 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.74□□□□□ -1.49
CHRNA1P02708 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
CHRNA1P02708 RNA5SP90-201ENST00000364801 99 ntBASIC5.74□□□□□ -1.49
CHRNA1P02708 RNA5SP455-201ENST00000365190 119 ntBASIC5.74□□□□□ -1.49
CHRNA1P02708 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
CHRNA1P02708 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC5.74□□□□□ -1.49
CHRNA1P02708 NIPA2P1-201ENST00000426223 976 ntBASIC5.74□□□□□ -1.49
CHRNA1P02708 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.74□□□□□ -1.49
CHRNA1P02708 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.74□□□□□ -1.49
CHRNA1P02708 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.74□□□□□ -1.49
CHRNA1P02708 AC092324.1-201ENST00000468671 324 ntBASIC5.74□□□□□ -1.49
CHRNA1P02708 AP000797.2-201ENST00000475768 606 ntBASIC5.74□□□□□ -1.49
CHRNA1P02708 AC007686.1-201ENST00000488511 463 ntBASIC5.74□□□□□ -1.49
CHRNA1P02708 AC105420.1-201ENST00000504389 582 ntBASIC5.74□□□□□ -1.49
CHRNA1P02708 SNORA70.11-201ENST00000515987 138 ntBASIC5.74□□□□□ -1.49
CHRNA1P02708 SNORA70.13-201ENST00000516116 138 ntBASIC5.74□□□□□ -1.49
CHRNA1P02708 SNORA26.10-201ENST00000516427 141 ntBASIC5.74□□□□□ -1.49
CHRNA1P02708 HIGD1AP5-201ENST00000529959 259 ntBASIC5.74□□□□□ -1.49
CHRNA1P02708 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.74□□□□□ -1.49
CHRNA1P02708 AC008033.2-201ENST00000542626 177 ntBASIC5.74□□□□□ -1.49
CHRNA1P02708 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.74□□□□□ -1.49
CHRNA1P02708 AC084824.2-201ENST00000548906 345 ntBASIC5.74□□□□□ -1.49
CHRNA1P02708 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
CHRNA1P02708 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.74□□□□□ -1.49
CHRNA1P02708 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.74□□□□□ -1.49
CHRNA1P02708 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.74□□□□□ -1.49
CHRNA1P02708 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
CHRNA1P02708 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
CHRNA1P02708 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.74□□□□□ -1.49
CHRNA1P02708 AL162431.4-201ENST00000604674 411 ntBASIC5.74□□□□□ -1.49
CHRNA1P02708 AL627230.1-201ENST00000613077 211 ntBASIC5.74□□□□□ -1.49
CHRNA1P02708 AL591926.8-201ENST00000616876 211 ntBASIC5.74□□□□□ -1.49
CHRNA1P02708 AC112694.2-201ENST00000623697 768 ntBASIC5.74□□□□□ -1.49
CHRNA1P02708 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
CHRNA1P02708 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CHRNA1P02708 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CHRNA1P02708 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CHRNA1P02708 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.74□□□□□ -1.49
CHRNA1P02708 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
CHRNA1P02708 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CHRNA1P02708 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.74□□□□□ -1.49
CHRNA1P02708 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CHRNA1P02708 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.74□□□□□ -1.49
CHRNA1P02708 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.74□□□□□ -1.49
CHRNA1P02708 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms