Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC6.02□□□□□ -1.44
COL2A1P02458 IGHV5-78-201ENST00000450948 295 ntBASIC6.02□□□□□ -1.44
COL2A1P02458 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC6.02□□□□□ -1.44
COL2A1P02458 RN7SL197P-201ENST00000466981 299 ntBASIC6.02□□□□□ -1.44
COL2A1P02458 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC6.02□□□□□ -1.44
COL2A1P02458 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC6.02□□□□□ -1.44
COL2A1P02458 UBE2FP2-201ENST00000566646 462 ntBASIC6.02□□□□□ -1.44
COL2A1P02458 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC6.02□□□□□ -1.44
COL2A1P02458 AL031320.1-201ENST00000604177 357 ntBASIC6.02□□□□□ -1.44
COL2A1P02458 AC005377.1-201ENST00000605126 456 ntBASIC6.02□□□□□ -1.44
COL2A1P02458 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC6.02□□□□□ -1.44
COL2A1P02458 AC012414.7-202ENST00000622705 1090 ntBASIC6.02□□□□□ -1.44
COL2A1P02458 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
COL2A1P02458 AC132825.1-201ENST00000463573 2247 ntBASIC6.02□□□□□ -1.45
COL2A1P02458 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
COL2A1P02458 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.02□□□□□ -1.45
COL2A1P02458 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC6.02□□□□□ -1.45
COL2A1P02458 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
COL2A1P02458 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC6.02□□□□□ -1.45
COL2A1P02458 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
COL2A1P02458 CASC19-221ENST00000641309 1382 ntBASIC6.02□□□□□ -1.45
COL2A1P02458 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.02□□□□□ -1.45
COL2A1P02458 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.02□□□□□ -1.45
COL2A1P02458 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.02□□□□□ -1.45
COL2A1P02458 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
COL2A1P02458 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
COL2A1P02458 AL359955.1-201ENST00000455242 3275 ntBASIC6.02□□□□□ -1.45
COL2A1P02458 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
COL2A1P02458 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
COL2A1P02458 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
COL2A1P02458 HMGB3P7-201ENST00000400214 611 ntBASIC6.02□□□□□ -1.45
COL2A1P02458 RPL19P16-201ENST00000433839 588 ntBASIC6.02□□□□□ -1.45
COL2A1P02458 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
COL2A1P02458 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC6.02□□□□□ -1.45
COL2A1P02458 AL161747.1-201ENST00000480068 358 ntBASIC6.02□□□□□ -1.45
COL2A1P02458 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC6.02□□□□□ -1.45
COL2A1P02458 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
COL2A1P02458 AC010350.1-201ENST00000504908 231 ntBASIC6.02□□□□□ -1.45
COL2A1P02458 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
COL2A1P02458 HPRT1P1-201ENST00000509498 657 ntBASIC6.02□□□□□ -1.45
COL2A1P02458 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC6.02□□□□□ -1.45
COL2A1P02458 BNIP3P35-201ENST00000604530 490 ntBASIC6.02□□□□□ -1.45
COL2A1P02458 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC6.02□□□□□ -1.45
COL2A1P02458 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC6.02□□□□□ -1.45
COL2A1P02458 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC6.02□□□□□ -1.45
COL2A1P02458 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
COL2A1P02458 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
COL2A1P02458 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.01□□□□□ -1.45
COL2A1P02458 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
COL2A1P02458 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.01□□□□□ -1.45
COL2A1P02458 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC6.01□□□□□ -1.45
COL2A1P02458 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.01□□□□□ -1.45
COL2A1P02458 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.01□□□□□ -1.45
COL2A1P02458 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL2A1P02458 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC6.01□□□□□ -1.45
COL2A1P02458 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
COL2A1P02458 RNA5SP505-201ENST00000364748 108 ntBASIC6.01□□□□□ -1.45
COL2A1P02458 RNA5SP113-201ENST00000410486 84 ntBASIC6.01□□□□□ -1.45
COL2A1P02458 RN7SKP100-201ENST00000411258 284 ntBASIC6.01□□□□□ -1.45
COL2A1P02458 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC6.01□□□□□ -1.45
COL2A1P02458 AC009238.2-201ENST00000431026 355 ntBASIC6.01□□□□□ -1.45
COL2A1P02458 AL137845.2-201ENST00000444292 988 ntBASIC6.01□□□□□ -1.45
COL2A1P02458 GAPDHP14-201ENST00000450472 937 ntBASIC6.01□□□□□ -1.45
COL2A1P02458 BX842559.2-201ENST00000451418 605 ntBASIC6.01□□□□□ -1.45
COL2A1P02458 AC103987.1-201ENST00000473394 348 ntBASIC6.01□□□□□ -1.45
COL2A1P02458 AC005412.2-201ENST00000492004 341 ntBASIC6.01□□□□□ -1.45
COL2A1P02458 RN7SL441P-201ENST00000492388 296 ntBASIC6.01□□□□□ -1.45
COL2A1P02458 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC6.01□□□□□ -1.45
COL2A1P02458 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC6.01□□□□□ -1.45
COL2A1P02458 OR5AN2P-201ENST00000534535 896 ntBASIC6.01□□□□□ -1.45
COL2A1P02458 AL110118.1-201ENST00000553543 400 ntBASIC6.01□□□□□ -1.45
COL2A1P02458 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC6.01□□□□□ -1.45
COL2A1P02458 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC6.01□□□□□ -1.45
COL2A1P02458 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.01□□□□□ -1.45
COL2A1P02458 AL391358.1-201ENST00000605342 190 ntBASIC6.01□□□□□ -1.45
COL2A1P02458 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL2A1P02458 CR381572.2-201ENST00000624852 397 ntBASIC6.01□□□□□ -1.45
COL2A1P02458 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
COL2A1P02458 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC6.01□□□□□ -1.45
COL2A1P02458 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL2A1P02458 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL2A1P02458 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL2A1P02458 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
COL2A1P02458 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC6□□□□□ -1.45
COL2A1P02458 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC6□□□□□ -1.45
COL2A1P02458 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
COL2A1P02458 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
COL2A1P02458 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC6□□□□□ -1.45
COL2A1P02458 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6□□□□□ -1.45
COL2A1P02458 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
COL2A1P02458 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
COL2A1P02458 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
COL2A1P02458 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
COL2A1P02458 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
COL2A1P02458 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC6□□□□□ -1.45
COL2A1P02458 AL354868.1-201ENST00000417077 482 ntBASIC6□□□□□ -1.45
COL2A1P02458 AC112498.1-201ENST00000444401 332 ntBASIC6□□□□□ -1.45
COL2A1P02458 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC6□□□□□ -1.45
COL2A1P02458 AC111000.6-201ENST00000514471 709 ntBASIC6□□□□□ -1.45
COL2A1P02458 MIR3667-201ENST00000581025 74 ntBASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms