Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CNOT4O95628 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC5.93□□□□□ -1.46
CNOT4O95628 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC5.93□□□□□ -1.46
CNOT4O95628 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CNOT4O95628 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
CNOT4O95628 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CNOT4O95628 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CNOT4O95628 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CNOT4O95628 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CNOT4O95628 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CNOT4O95628 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CNOT4O95628 Y_RNA.3-201ENST00000362331 103 ntBASIC5.93□□□□□ -1.46
CNOT4O95628 RNU6-867P-201ENST00000364956 107 ntBASIC5.93□□□□□ -1.46
CNOT4O95628 RN7SKP269-201ENST00000365545 319 ntBASIC5.93□□□□□ -1.46
CNOT4O95628 SNORA64.3-201ENST00000365647 134 ntBASIC5.93□□□□□ -1.46
CNOT4O95628 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC5.93□□□□□ -1.46
CNOT4O95628 RNU6-532P-201ENST00000384318 107 ntBASIC5.93□□□□□ -1.46
CNOT4O95628 ATP5HP3-201ENST00000396994 486 ntBASIC5.93□□□□□ -1.46
CNOT4O95628 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CNOT4O95628 RN7SKP296-201ENST00000411185 341 ntBASIC5.93□□□□□ -1.46
CNOT4O95628 XKRYP4-201ENST00000414395 483 ntBASIC5.93□□□□□ -1.46
CNOT4O95628 RPS7P12-201ENST00000422385 582 ntBASIC5.93□□□□□ -1.46
CNOT4O95628 RPS4XP16-201ENST00000427198 791 ntBASIC5.93□□□□□ -1.46
CNOT4O95628 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC5.93□□□□□ -1.46
CNOT4O95628 ATP6V1G1P4-201ENST00000438388 335 ntBASIC5.93□□□□□ -1.46
CNOT4O95628 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CNOT4O95628 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC5.93□□□□□ -1.46
CNOT4O95628 PFN1P11-201ENST00000445829 389 ntBASIC5.93□□□□□ -1.46
CNOT4O95628 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC5.93□□□□□ -1.46
CNOT4O95628 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.93□□□□□ -1.46
CNOT4O95628 XKRYP5-201ENST00000449659 483 ntBASIC5.93□□□□□ -1.46
CNOT4O95628 AURKAPS1-201ENST00000451805 1212 ntBASIC5.93□□□□□ -1.46
CNOT4O95628 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.93□□□□□ -1.46
CNOT4O95628 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CNOT4O95628 RPL26P30-201ENST00000453533 435 ntBASIC5.93□□□□□ -1.46
CNOT4O95628 AKR1D1P1-201ENST00000457236 936 ntBASIC5.93□□□□□ -1.46
CNOT4O95628 AC069528.1-202ENST00000482888 637 ntBASIC5.93□□□□□ -1.46
CNOT4O95628 CR383656.1-201ENST00000484916 377 ntBASIC5.93□□□□□ -1.46
CNOT4O95628 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CNOT4O95628 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5.93□□□□□ -1.46
CNOT4O95628 AC023818.1-201ENST00000498379 384 ntBASIC5.93□□□□□ -1.46
CNOT4O95628 AC011411.1-201ENST00000509592 876 ntBASIC5.93□□□□□ -1.46
CNOT4O95628 RN7SKP141-201ENST00000516167 338 ntBASIC5.93□□□□□ -1.46
CNOT4O95628 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC5.93□□□□□ -1.46
CNOT4O95628 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.93□□□□□ -1.46
CNOT4O95628 DEFB130C-202ENST00000530001 230 ntBASIC5.93□□□□□ -1.46
CNOT4O95628 AC068305.2-201ENST00000550567 1205 ntBASIC5.93□□□□□ -1.46
CNOT4O95628 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC5.93□□□□□ -1.46
CNOT4O95628 BLZF2P-201ENST00000553776 1130 ntBASIC5.93□□□□□ -1.46
CNOT4O95628 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.93□□□□□ -1.46
CNOT4O95628 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.93□□□□□ -1.46
CNOT4O95628 VN1R90P-201ENST00000595717 726 ntBASIC5.93□□□□□ -1.46
CNOT4O95628 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC5.93□□□□□ -1.46
CNOT4O95628 AC023813.4-201ENST00000607580 580 ntBASIC5.93□□□□□ -1.46
CNOT4O95628 Six3os1_4.1-201ENST00000615706 324 ntBASIC5.93□□□□□ -1.46
CNOT4O95628 AL591926.1-201ENST00000620542 217 ntBASIC5.93□□□□□ -1.46
CNOT4O95628 AC007494.3-201ENST00000624660 743 ntBASIC5.93□□□□□ -1.46
CNOT4O95628 AC068213.1-201ENST00000625124 226 ntBASIC5.93□□□□□ -1.46
CNOT4O95628 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC5.93□□□□□ -1.46
CNOT4O95628 FP325313.1-201ENST00000638228 703 ntBASIC5.93□□□□□ -1.46
CNOT4O95628 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
CNOT4O95628 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
CNOT4O95628 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CNOT4O95628 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.93□□□□□ -1.46
CNOT4O95628 ANKRD20A17P-201ENST00000511745 1330 ntBASIC5.93□□□□□ -1.46
CNOT4O95628 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
CNOT4O95628 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CNOT4O95628 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
CNOT4O95628 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CNOT4O95628 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC5.93□□□□□ -1.46
CNOT4O95628 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CNOT4O95628 AC010132.4-201ENST00000569883 1368 ntBASIC5.93□□□□□ -1.46
CNOT4O95628 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CNOT4O95628 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CNOT4O95628 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CNOT4O95628 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.92□□□□□ -1.46
CNOT4O95628 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
CNOT4O95628 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.92□□□□□ -1.46
CNOT4O95628 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
CNOT4O95628 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
CNOT4O95628 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.92□□□□□ -1.46
CNOT4O95628 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CNOT4O95628 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CNOT4O95628 CYP2G2P-201ENST00000594920 1485 ntBASIC5.92□□□□□ -1.46
CNOT4O95628 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
CNOT4O95628 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
CNOT4O95628 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
CNOT4O95628 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CNOT4O95628 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
CNOT4O95628 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
CNOT4O95628 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CNOT4O95628 NOX1-203ENST00000372964 661 ntTSL 2 BASIC5.92□□□□□ -1.46
CNOT4O95628 MTND4LP20-201ENST00000402379 270 ntBASIC5.92□□□□□ -1.46
CNOT4O95628 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
CNOT4O95628 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CNOT4O95628 MIR1282-201ENST00000408865 101 ntBASIC5.92□□□□□ -1.46
CNOT4O95628 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC5.92□□□□□ -1.46
CNOT4O95628 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.92□□□□□ -1.46
CNOT4O95628 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC5.92□□□□□ -1.46
CNOT4O95628 RPL7AP14-201ENST00000424041 802 ntBASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms