Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.18□□□□□ -1.58
NKX2-2O95096 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.18□□□□□ -1.58
NKX2-2O95096 OR5AM1P-201ENST00000532136 1032 ntBASIC5.18□□□□□ -1.58
NKX2-2O95096 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.18□□□□□ -1.58
NKX2-2O95096 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.18□□□□□ -1.58
NKX2-2O95096 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC5.18□□□□□ -1.58
NKX2-2O95096 AC104229.1-201ENST00000561364 255 ntBASIC5.18□□□□□ -1.58
NKX2-2O95096 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC5.18□□□□□ -1.58
NKX2-2O95096 NDUFA5P11-201ENST00000567995 343 ntBASIC5.18□□□□□ -1.58
NKX2-2O95096 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC5.18□□□□□ -1.58
NKX2-2O95096 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC5.18□□□□□ -1.58
NKX2-2O95096 AC009237.12-201ENST00000604755 742 ntBASIC5.18□□□□□ -1.58
NKX2-2O95096 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.18□□□□□ -1.58
NKX2-2O95096 AC110792.4-201ENST00000609843 298 ntBASIC5.18□□□□□ -1.58
NKX2-2O95096 AP000240.1-201ENST00000609910 452 ntBASIC5.18□□□□□ -1.58
NKX2-2O95096 AC025574.2-201ENST00000615621 514 ntBASIC5.18□□□□□ -1.58
NKX2-2O95096 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NKX2-2O95096 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC5.18□□□□□ -1.58
NKX2-2O95096 AL590396.2-201ENST00000636511 1041 ntBASIC5.18□□□□□ -1.58
NKX2-2O95096 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.18□□□□□ -1.58
NKX2-2O95096 AP001153.1-201ENST00000641024 338 ntBASIC5.18□□□□□ -1.58
NKX2-2O95096 SMG1P7-201ENST00000565246 2704 ntBASIC5.18□□□□□ -1.58
NKX2-2O95096 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NKX2-2O95096 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NKX2-2O95096 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
NKX2-2O95096 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
NKX2-2O95096 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.18□□□□□ -1.58
NKX2-2O95096 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NKX2-2O95096 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
NKX2-2O95096 MTND4P9-201ENST00000507819 1346 ntBASIC5.18□□□□□ -1.58
NKX2-2O95096 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
NKX2-2O95096 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
NKX2-2O95096 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
NKX2-2O95096 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.18□□□□□ -1.58
NKX2-2O95096 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NKX2-2O95096 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NKX2-2O95096 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
NKX2-2O95096 TTC41P-205ENST00000551270 3963 ntBASIC5.17□□□□□ -1.58
NKX2-2O95096 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
NKX2-2O95096 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
NKX2-2O95096 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.17□□□□□ -1.58
NKX2-2O95096 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.17□□□□□ -1.58
NKX2-2O95096 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
NKX2-2O95096 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NKX2-2O95096 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NKX2-2O95096 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NKX2-2O95096 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
NKX2-2O95096 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NKX2-2O95096 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
NKX2-2O95096 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
NKX2-2O95096 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
NKX2-2O95096 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
NKX2-2O95096 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
NKX2-2O95096 GAPDHP42-201ENST00000406848 981 ntBASIC5.17□□□□□ -1.58
NKX2-2O95096 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
NKX2-2O95096 AL662874.1-201ENST00000426065 230 ntBASIC5.17□□□□□ -1.58
NKX2-2O95096 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.17□□□□□ -1.58
NKX2-2O95096 AL450996.1-201ENST00000445574 1202 ntBASIC5.17□□□□□ -1.58
NKX2-2O95096 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
NKX2-2O95096 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.17□□□□□ -1.58
NKX2-2O95096 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NKX2-2O95096 RN7SL188P-201ENST00000469842 285 ntBASIC5.17□□□□□ -1.58
NKX2-2O95096 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NKX2-2O95096 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC5.17□□□□□ -1.58
NKX2-2O95096 HAUS1P1-201ENST00000505275 832 ntBASIC5.17□□□□□ -1.58
NKX2-2O95096 AC112518.2-201ENST00000508565 425 ntBASIC5.17□□□□□ -1.58
NKX2-2O95096 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.17□□□□□ -1.58
NKX2-2O95096 SNORD46.2-201ENST00000516021 102 ntBASIC5.17□□□□□ -1.58
NKX2-2O95096 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.17□□□□□ -1.58
NKX2-2O95096 CIR1P1-201ENST00000524055 1133 ntBASIC5.17□□□□□ -1.58
NKX2-2O95096 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.17□□□□□ -1.58
NKX2-2O95096 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC5.17□□□□□ -1.58
NKX2-2O95096 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NKX2-2O95096 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.17□□□□□ -1.58
NKX2-2O95096 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.17□□□□□ -1.58
NKX2-2O95096 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.17□□□□□ -1.58
NKX2-2O95096 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.17□□□□□ -1.58
NKX2-2O95096 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.17□□□□□ -1.58
NKX2-2O95096 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.17□□□□□ -1.58
NKX2-2O95096 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NKX2-2O95096 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC5.17□□□□□ -1.58
NKX2-2O95096 MIR6778-201ENST00000617912 73 ntBASIC5.17□□□□□ -1.58
NKX2-2O95096 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.17□□□□□ -1.58
NKX2-2O95096 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC5.17□□□□□ -1.58
NKX2-2O95096 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.17□□□□□ -1.58
NKX2-2O95096 AP000550.3-201ENST00000637734 379 ntBASIC5.17□□□□□ -1.58
NKX2-2O95096 AC119674.1-212ENST00000641155 993 ntBASIC5.17□□□□□ -1.58
NKX2-2O95096 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
NKX2-2O95096 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.17□□□□□ -1.58
NKX2-2O95096 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.17□□□□□ -1.58
NKX2-2O95096 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.17□□□□□ -1.58
NKX2-2O95096 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.17□□□□□ -1.58
NKX2-2O95096 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NKX2-2O95096 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.17□□□□□ -1.58
NKX2-2O95096 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.17□□□□□ -1.58
NKX2-2O95096 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
NKX2-2O95096 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NKX2-2O95096 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
NKX2-2O95096 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.16□□□□□ -1.58
NKX2-2O95096 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms