Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC8.91□□□□□ -0.98
CUX2O14529 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
CUX2O14529 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
CUX2O14529 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC8.91□□□□□ -0.98
CUX2O14529 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
CUX2O14529 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC8.91□□□□□ -0.98
CUX2O14529 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
CUX2O14529 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC8.91□□□□□ -0.98
CUX2O14529 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
CUX2O14529 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
CUX2O14529 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
CUX2O14529 STK3-216ENST00000523601 3107 ntTSL 2 BASIC8.91□□□□□ -0.98
CUX2O14529 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC8.9□□□□□ -0.98
CUX2O14529 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC8.9□□□□□ -0.98
CUX2O14529 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
CUX2O14529 RPL23AP17-201ENST00000401064 499 ntBASIC8.9□□□□□ -0.98
CUX2O14529 RPL34P27-201ENST00000428810 349 ntBASIC8.9□□□□□ -0.98
CUX2O14529 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC8.9□□□□□ -0.98
CUX2O14529 RPL7L1P8-201ENST00000469911 741 ntBASIC8.9□□□□□ -0.98
CUX2O14529 RN7SL423P-201ENST00000486202 304 ntBASIC8.9□□□□□ -0.98
CUX2O14529 AC109464.1-201ENST00000511091 819 ntBASIC8.9□□□□□ -0.98
CUX2O14529 MTCO1P49-201ENST00000523429 802 ntBASIC8.9□□□□□ -0.98
CUX2O14529 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
CUX2O14529 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC8.9□□□□□ -0.98
CUX2O14529 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC8.9□□□□□ -0.98
CUX2O14529 AL121890.3-201ENST00000618494 516 ntBASIC8.9□□□□□ -0.98
CUX2O14529 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
CUX2O14529 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
CUX2O14529 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC8.9□□□□□ -0.98
CUX2O14529 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
CUX2O14529 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
CUX2O14529 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC8.9□□□□□ -0.99
CUX2O14529 AC006206.1-201ENST00000544842 3387 ntBASIC8.9□□□□□ -0.99
CUX2O14529 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC8.9□□□□□ -0.99
CUX2O14529 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
CUX2O14529 AC092651.1-201ENST00000426110 312 ntBASIC8.89□□□□□ -0.99
CUX2O14529 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC8.89□□□□□ -0.99
CUX2O14529 ENPP7P9-201ENST00000514456 627 ntBASIC8.89□□□□□ -0.99
CUX2O14529 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
CUX2O14529 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC8.89□□□□□ -0.99
CUX2O14529 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC8.89□□□□□ -0.99
CUX2O14529 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC8.89□□□□□ -0.99
CUX2O14529 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC8.89□□□□□ -0.99
CUX2O14529 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
CUX2O14529 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
CUX2O14529 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
CUX2O14529 AC006600.2-201ENST00000624834 2506 ntBASIC8.89□□□□□ -0.99
CUX2O14529 ZFRP1-201ENST00000457579 2970 ntBASIC8.89□□□□□ -0.99
CUX2O14529 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
CUX2O14529 SMG1P7-201ENST00000565246 2704 ntBASIC8.89□□□□□ -0.99
CUX2O14529 EEF1A1P33-201ENST00000554413 1362 ntBASIC8.89□□□□□ -0.99
CUX2O14529 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC8.89□□□□□ -0.99
CUX2O14529 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
CUX2O14529 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
CUX2O14529 Y_RNA.333-201ENST00000365274 102 ntBASIC8.89□□□□□ -0.99
CUX2O14529 OR1L6-202ENST00000373684 1044 ntBASIC8.89□□□□□ -0.99
CUX2O14529 OR6C69P-201ENST00000394268 893 ntBASIC8.89□□□□□ -0.99
CUX2O14529 RPL12P43-201ENST00000420608 499 ntBASIC8.89□□□□□ -0.99
CUX2O14529 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC8.89□□□□□ -0.99
CUX2O14529 snoU13.24-201ENST00000458998 104 ntBASIC8.89□□□□□ -0.99
CUX2O14529 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC8.89□□□□□ -0.99
CUX2O14529 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC8.89□□□□□ -0.99
CUX2O14529 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC8.89□□□□□ -0.99
CUX2O14529 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC8.89□□□□□ -0.99
CUX2O14529 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC8.89□□□□□ -0.99
CUX2O14529 UGP2-232ENST00000640075 567 ntTSL 5 BASIC8.89□□□□□ -0.99
CUX2O14529 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
CUX2O14529 AC011933.2-201ENST00000578539 2790 ntBASIC8.88□□□□□ -0.99
CUX2O14529 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
CUX2O14529 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
CUX2O14529 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC8.88□□□□□ -0.99
CUX2O14529 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC8.88□□□□□ -0.99
CUX2O14529 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
CUX2O14529 AC114774.1-201ENST00000507410 1770 ntBASIC8.88□□□□□ -0.99
CUX2O14529 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC8.88□□□□□ -0.99
CUX2O14529 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
CUX2O14529 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC8.88□□□□□ -0.99
CUX2O14529 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC8.88□□□□□ -0.99
CUX2O14529 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC8.88□□□□□ -0.99
CUX2O14529 CEACAMP6-201ENST00000452007 574 ntBASIC8.88□□□□□ -0.99
CUX2O14529 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC8.88□□□□□ -0.99
CUX2O14529 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
CUX2O14529 AP001804.1-201ENST00000526868 919 ntBASIC8.88□□□□□ -0.99
CUX2O14529 OR11H3P-201ENST00000554547 982 ntBASIC8.88□□□□□ -0.99
CUX2O14529 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
CUX2O14529 PDCD6IPP2-207ENST00000566321 1069 ntBASIC8.88□□□□□ -0.99
CUX2O14529 AP005901.4-201ENST00000577336 569 ntBASIC8.88□□□□□ -0.99
CUX2O14529 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC8.88□□□□□ -0.99
CUX2O14529 AC008782.1-201ENST00000603386 430 ntBASIC8.88□□□□□ -0.99
CUX2O14529 AP005432.2-201ENST00000608162 586 ntBASIC8.88□□□□□ -0.99
CUX2O14529 AC135068.5-201ENST00000624197 983 ntBASIC8.88□□□□□ -0.99
CUX2O14529 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC8.88□□□□□ -0.99
CUX2O14529 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
CUX2O14529 AC108751.5-201ENST00000492880 1336 ntBASIC8.88□□□□□ -0.99
CUX2O14529 PLXNC1-205ENST00000547057 2455 ntTSL 2 BASIC8.87□□□□□ -0.99
CUX2O14529 AC083899.1-201ENST00000454465 3819 ntBASIC8.87□□□□□ -0.99
CUX2O14529 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC8.87□□□□□ -0.99
CUX2O14529 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC8.87□□□□□ -0.99
CUX2O14529 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
CUX2O14529 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 182.9 ms