Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC2.78□□□□□ -1.96
CHKB-CPT1BH3BT56 AC026333.4-201ENST00000613543 544 ntBASIC2.78□□□□□ -1.96
CHKB-CPT1BH3BT56 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC2.78□□□□□ -1.96
CHKB-CPT1BH3BT56 AP005431.1-201ENST00000618479 319 ntBASIC2.78□□□□□ -1.96
CHKB-CPT1BH3BT56 MIR6839-201ENST00000620425 113 ntBASIC2.78□□□□□ -1.96
CHKB-CPT1BH3BT56 MIR6754-201ENST00000621121 66 ntBASIC2.78□□□□□ -1.96
CHKB-CPT1BH3BT56 AC140113.4-201ENST00000622087 222 ntBASIC2.78□□□□□ -1.96
CHKB-CPT1BH3BT56 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC2.78□□□□□ -1.96
CHKB-CPT1BH3BT56 AC073869.8-201ENST00000641806 335 ntBASIC2.78□□□□□ -1.96
CHKB-CPT1BH3BT56 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CHKB-CPT1BH3BT56 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CHKB-CPT1BH3BT56 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
CHKB-CPT1BH3BT56 HSPD1P11-201ENST00000508643 1702 ntBASIC2.78□□□□□ -1.96
CHKB-CPT1BH3BT56 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
CHKB-CPT1BH3BT56 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
CHKB-CPT1BH3BT56 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CHKB-CPT1BH3BT56 AC095038.1-201ENST00000429248 1591 ntBASIC2.78□□□□□ -1.96
CHKB-CPT1BH3BT56 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.97
CHKB-CPT1BH3BT56 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.97
CHKB-CPT1BH3BT56 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 AC023421.1-201ENST00000590535 1785 ntBASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 AC083899.2-201ENST00000423285 1376 ntBASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 AL353746.1-201ENST00000566293 6881 ntBASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 SCFD1-202ENST00000396629 2021 ntTSL 2 BASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 U3.2-201ENST00000362981 210 ntBASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 AL592291.1-201ENST00000403830 352 ntBASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 ZNF603P-201ENST00000405613 487 ntBASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 NIFKP3-201ENST00000417799 865 ntBASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 AC015987.1-201ENST00000419211 804 ntTSL 2 BASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 RPL7P53-201ENST00000421245 739 ntBASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 ATP5A1P8-201ENST00000423669 1291 ntBASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 AC093698.1-201ENST00000423843 571 ntBASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 OSTCP4-201ENST00000424397 449 ntBASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 NMNAT1P2-201ENST00000435192 860 ntBASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 RPL14P5-201ENST00000436474 730 ntBASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 RPS12P17-201ENST00000438591 377 ntBASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 AL391987.1-201ENST00000441025 200 ntBASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 LINC02344-201ENST00000443576 644 ntTSL 2 BASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 HMGB1P16-201ENST00000447155 540 ntBASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 OTX2P1-201ENST00000450956 354 ntBASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 CBX5P1-201ENST00000468470 561 ntBASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 RN7SL91P-201ENST00000469313 291 ntBASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 S100A11P1-201ENST00000477525 312 ntBASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 SYT14P1-201ENST00000481459 721 ntBASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 RPL34P33-201ENST00000486062 334 ntBASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 RN7SL239P-201ENST00000490061 300 ntBASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 AC106872.2-201ENST00000494303 480 ntBASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 AL136038.1-201ENST00000497246 351 ntBASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 AC113367.2-201ENST00000505749 160 ntBASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 AC114947.1-201ENST00000511991 432 ntTSL 2 BASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 HNRNPKP5-201ENST00000515300 253 ntBASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 RNU2-30P-201ENST00000516209 141 ntBASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 RNA5SP422-201ENST00000516778 111 ntBASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 SCARNA20.4-201ENST00000516969 131 ntBASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 IGLVVII-41-1-201ENST00000518405 151 ntBASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 AC024270.2-201ENST00000568441 499 ntTSL 5 BASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 AC091979.2-201ENST00000607514 214 ntBASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 AC244107.2-201ENST00000611773 76 ntBASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 AL158062.1-201ENST00000619632 745 ntBASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 AP002505.2-201ENST00000623585 696 ntBASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 AC084879.1-201ENST00000636165 1201 ntBASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 AC009951.1-201ENST00000623674 2614 ntBASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
CHKB-CPT1BH3BT56 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 147.7 ms