Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 SNORA70.13-201ENST00000516116 138 ntBASIC5.04□□□□□ -1.6
NPIPA3F8WFD2 RNA5SP92-201ENST00000516437 110 ntBASIC5.04□□□□□ -1.6
NPIPA3F8WFD2 OR10G5P-201ENST00000532733 358 ntBASIC5.04□□□□□ -1.6
NPIPA3F8WFD2 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.04□□□□□ -1.6
NPIPA3F8WFD2 AC137627.1-201ENST00000545761 289 ntBASIC5.04□□□□□ -1.6
NPIPA3F8WFD2 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.04□□□□□ -1.6
NPIPA3F8WFD2 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.04□□□□□ -1.6
NPIPA3F8WFD2 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.04□□□□□ -1.6
NPIPA3F8WFD2 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.04□□□□□ -1.6
NPIPA3F8WFD2 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC5.04□□□□□ -1.6
NPIPA3F8WFD2 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.04□□□□□ -1.6
NPIPA3F8WFD2 DHFRP1-201ENST00000579682 559 ntBASIC5.04□□□□□ -1.6
NPIPA3F8WFD2 MIR4311-201ENST00000580794 100 ntBASIC5.04□□□□□ -1.6
NPIPA3F8WFD2 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.04□□□□□ -1.6
NPIPA3F8WFD2 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC5.04□□□□□ -1.6
NPIPA3F8WFD2 AC012616.1-201ENST00000600294 197 ntBASIC5.04□□□□□ -1.6
NPIPA3F8WFD2 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC5.04□□□□□ -1.6
NPIPA3F8WFD2 AC074276.2-201ENST00000619891 348 ntBASIC5.04□□□□□ -1.6
NPIPA3F8WFD2 HPVC1-201ENST00000629899 1198 ntBASIC5.04□□□□□ -1.6
NPIPA3F8WFD2 AC000095.2-202ENST00000637415 154 ntBASIC5.04□□□□□ -1.6
NPIPA3F8WFD2 SAMMSON-209ENST00000641222 1100 ntBASIC5.04□□□□□ -1.6
NPIPA3F8WFD2 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
NPIPA3F8WFD2 AP005435.3-201ENST00000531260 3198 ntBASIC5.04□□□□□ -1.6
NPIPA3F8WFD2 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
NPIPA3F8WFD2 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NPIPA3F8WFD2 AC004076.2-201ENST00000620532 3323 ntBASIC5.04□□□□□ -1.6
NPIPA3F8WFD2 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NPIPA3F8WFD2 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NPIPA3F8WFD2 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
NPIPA3F8WFD2 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
NPIPA3F8WFD2 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NPIPA3F8WFD2 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
NPIPA3F8WFD2 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.03□□□□□ -1.6
NPIPA3F8WFD2 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
NPIPA3F8WFD2 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
NPIPA3F8WFD2 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
NPIPA3F8WFD2 AL590763.1-201ENST00000398297 1545 ntBASIC5.03□□□□□ -1.6
NPIPA3F8WFD2 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
NPIPA3F8WFD2 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.03□□□□□ -1.6
NPIPA3F8WFD2 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
NPIPA3F8WFD2 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
NPIPA3F8WFD2 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
NPIPA3F8WFD2 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.03□□□□□ -1.6
NPIPA3F8WFD2 RN7SKP6-201ENST00000364795 319 ntBASIC5.03□□□□□ -1.6
NPIPA3F8WFD2 SNORA27.3-201ENST00000364937 134 ntBASIC5.03□□□□□ -1.6
NPIPA3F8WFD2 MIR551A-201ENST00000385042 96 ntBASIC5.03□□□□□ -1.6
NPIPA3F8WFD2 RNA5SP105-201ENST00000391123 113 ntBASIC5.03□□□□□ -1.6
NPIPA3F8WFD2 OR1F12-201ENST00000402365 945 ntBASIC5.03□□□□□ -1.6
NPIPA3F8WFD2 AC096921.1-201ENST00000411661 375 ntBASIC5.03□□□□□ -1.6
NPIPA3F8WFD2 DSTNP5-201ENST00000427921 523 ntBASIC5.03□□□□□ -1.6
NPIPA3F8WFD2 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.03□□□□□ -1.6
NPIPA3F8WFD2 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
NPIPA3F8WFD2 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.03□□□□□ -1.6
NPIPA3F8WFD2 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.03□□□□□ -1.6
NPIPA3F8WFD2 TAAR4P-201ENST00000454843 1039 ntBASIC5.03□□□□□ -1.6
NPIPA3F8WFD2 SEPT7P3-201ENST00000455017 621 ntBASIC5.03□□□□□ -1.6
NPIPA3F8WFD2 RPL7P45-201ENST00000455851 743 ntBASIC5.03□□□□□ -1.6
NPIPA3F8WFD2 AP002345.1-201ENST00000456493 928 ntBASIC5.03□□□□□ -1.6
NPIPA3F8WFD2 EIF2S2P4-201ENST00000461070 984 ntBASIC5.03□□□□□ -1.6
NPIPA3F8WFD2 AC090602.1-201ENST00000469695 252 ntBASIC5.03□□□□□ -1.6
NPIPA3F8WFD2 GAPDHP62-201ENST00000515313 990 ntBASIC5.03□□□□□ -1.6
NPIPA3F8WFD2 IGLV3-24-201ENST00000517477 197 ntBASIC5.03□□□□□ -1.6
NPIPA3F8WFD2 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.03□□□□□ -1.6
NPIPA3F8WFD2 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.03□□□□□ -1.6
NPIPA3F8WFD2 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.03□□□□□ -1.6
NPIPA3F8WFD2 HNRNPCP1-201ENST00000556181 766 ntBASIC5.03□□□□□ -1.6
NPIPA3F8WFD2 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.03□□□□□ -1.6
NPIPA3F8WFD2 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.03□□□□□ -1.6
NPIPA3F8WFD2 FAM106CP-201ENST00000582212 507 ntBASIC5.03□□□□□ -1.6
NPIPA3F8WFD2 AP001357.1-201ENST00000586304 1053 ntBASIC5.03□□□□□ -1.6
NPIPA3F8WFD2 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.03□□□□□ -1.6
NPIPA3F8WFD2 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC5.03□□□□□ -1.6
NPIPA3F8WFD2 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
NPIPA3F8WFD2 AC136428.4-201ENST00000634254 1155 ntBASIC5.03□□□□□ -1.6
NPIPA3F8WFD2 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.03□□□□□ -1.6
NPIPA3F8WFD2 AC079776.5-201ENST00000641920 211 ntBASIC5.03□□□□□ -1.6
NPIPA3F8WFD2 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
NPIPA3F8WFD2 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
NPIPA3F8WFD2 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.03□□□□□ -1.6
NPIPA3F8WFD2 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
NPIPA3F8WFD2 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
NPIPA3F8WFD2 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.03□□□□□ -1.6
NPIPA3F8WFD2 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
NPIPA3F8WFD2 AC144833.1-201ENST00000567953 4089 ntBASIC5.02□□□□□ -1.61
NPIPA3F8WFD2 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
NPIPA3F8WFD2 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
NPIPA3F8WFD2 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
NPIPA3F8WFD2 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
NPIPA3F8WFD2 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NPIPA3F8WFD2 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
NPIPA3F8WFD2 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
NPIPA3F8WFD2 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
NPIPA3F8WFD2 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.02□□□□□ -1.61
NPIPA3F8WFD2 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.02□□□□□ -1.61
NPIPA3F8WFD2 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
NPIPA3F8WFD2 OR4F13P-202ENST00000560066 2054 ntBASIC5.02□□□□□ -1.61
NPIPA3F8WFD2 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
NPIPA3F8WFD2 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
NPIPA3F8WFD2 U3.10-201ENST00000364459 214 ntBASIC5.02□□□□□ -1.61
NPIPA3F8WFD2 RNU6-883P-201ENST00000384597 107 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms