Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TCRBV5S1A1TA0A578 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
TCRBV5S1A1TA0A578 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TCRBV5S1A1TA0A578 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC5.73□□□□□ -1.49
TCRBV5S1A1TA0A578 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
TCRBV5S1A1TA0A578 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TCRBV5S1A1TA0A578 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
TCRBV5S1A1TA0A578 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
TCRBV5S1A1TA0A578 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.73□□□□□ -1.49
TCRBV5S1A1TA0A578 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
TCRBV5S1A1TA0A578 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.73□□□□□ -1.49
TCRBV5S1A1TA0A578 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
TCRBV5S1A1TA0A578 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
TCRBV5S1A1TA0A578 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TCRBV5S1A1TA0A578 MIR365B-201ENST00000362317 111 ntBASIC5.73□□□□□ -1.49
TCRBV5S1A1TA0A578 RNA5SP234-201ENST00000363916 119 ntBASIC5.73□□□□□ -1.49
TCRBV5S1A1TA0A578 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC5.73□□□□□ -1.49
TCRBV5S1A1TA0A578 MIR1282-201ENST00000408865 101 ntBASIC5.73□□□□□ -1.49
TCRBV5S1A1TA0A578 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.73□□□□□ -1.49
TCRBV5S1A1TA0A578 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC5.73□□□□□ -1.49
TCRBV5S1A1TA0A578 AC073909.1-201ENST00000447112 999 ntBASIC5.73□□□□□ -1.49
TCRBV5S1A1TA0A578 AC090804.1-201ENST00000448870 490 ntBASIC5.73□□□□□ -1.49
TCRBV5S1A1TA0A578 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.73□□□□□ -1.49
TCRBV5S1A1TA0A578 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
TCRBV5S1A1TA0A578 MTCO2P6-201ENST00000463134 685 ntBASIC5.73□□□□□ -1.49
TCRBV5S1A1TA0A578 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.73□□□□□ -1.49
TCRBV5S1A1TA0A578 RN7SL273P-201ENST00000481561 299 ntBASIC5.73□□□□□ -1.49
TCRBV5S1A1TA0A578 RN7SL205P-201ENST00000490174 284 ntBASIC5.73□□□□□ -1.49
TCRBV5S1A1TA0A578 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.73□□□□□ -1.49
TCRBV5S1A1TA0A578 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.73□□□□□ -1.49
TCRBV5S1A1TA0A578 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC5.73□□□□□ -1.49
TCRBV5S1A1TA0A578 HMGB1P46-201ENST00000520062 610 ntBASIC5.73□□□□□ -1.49
TCRBV5S1A1TA0A578 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.73□□□□□ -1.49
TCRBV5S1A1TA0A578 EEF1A1P37-201ENST00000522748 715 ntBASIC5.73□□□□□ -1.49
TCRBV5S1A1TA0A578 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.73□□□□□ -1.49
TCRBV5S1A1TA0A578 AC093014.1-201ENST00000548926 724 ntBASIC5.73□□□□□ -1.49
TCRBV5S1A1TA0A578 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.73□□□□□ -1.49
TCRBV5S1A1TA0A578 RBM22P12-201ENST00000567098 1255 ntBASIC5.73□□□□□ -1.49
TCRBV5S1A1TA0A578 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.73□□□□□ -1.49
TCRBV5S1A1TA0A578 AC090666.1-201ENST00000578241 445 ntBASIC5.73□□□□□ -1.49
TCRBV5S1A1TA0A578 MIR4505-201ENST00000582238 73 ntBASIC5.73□□□□□ -1.49
TCRBV5S1A1TA0A578 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.73□□□□□ -1.49
TCRBV5S1A1TA0A578 AL031658.2-201ENST00000616850 651 ntBASIC5.73□□□□□ -1.49
TCRBV5S1A1TA0A578 AC009159.2-201ENST00000617603 606 ntBASIC5.73□□□□□ -1.49
TCRBV5S1A1TA0A578 AC132068.1-201ENST00000623805 459 ntBASIC5.73□□□□□ -1.49
TCRBV5S1A1TA0A578 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TCRBV5S1A1TA0A578 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.73□□□□□ -1.49
TCRBV5S1A1TA0A578 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
TCRBV5S1A1TA0A578 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC5.73□□□□□ -1.49
TCRBV5S1A1TA0A578 HSPD1P14-201ENST00000432666 1618 ntBASIC5.73□□□□□ -1.49
TCRBV5S1A1TA0A578 AC017002.4-201ENST00000604721 1525 ntBASIC5.73□□□□□ -1.49
TCRBV5S1A1TA0A578 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
TCRBV5S1A1TA0A578 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
TCRBV5S1A1TA0A578 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TCRBV5S1A1TA0A578 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
TCRBV5S1A1TA0A578 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
TCRBV5S1A1TA0A578 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TCRBV5S1A1TA0A578 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TCRBV5S1A1TA0A578 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.72□□□□□ -1.49
TCRBV5S1A1TA0A578 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TCRBV5S1A1TA0A578 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.72□□□□□ -1.49
TCRBV5S1A1TA0A578 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
TCRBV5S1A1TA0A578 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TCRBV5S1A1TA0A578 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.72□□□□□ -1.49
TCRBV5S1A1TA0A578 AL391422.1-201ENST00000402155 436 ntBASIC5.72□□□□□ -1.49
TCRBV5S1A1TA0A578 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.72□□□□□ -1.49
TCRBV5S1A1TA0A578 RPS21P8-201ENST00000413365 247 ntBASIC5.72□□□□□ -1.49
TCRBV5S1A1TA0A578 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC5.72□□□□□ -1.49
TCRBV5S1A1TA0A578 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.72□□□□□ -1.49
TCRBV5S1A1TA0A578 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.72□□□□□ -1.49
TCRBV5S1A1TA0A578 KCTD9P1-201ENST00000430462 1167 ntBASIC5.72□□□□□ -1.49
TCRBV5S1A1TA0A578 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.72□□□□□ -1.49
TCRBV5S1A1TA0A578 ELOCP11-201ENST00000436690 332 ntBASIC5.72□□□□□ -1.49
TCRBV5S1A1TA0A578 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.72□□□□□ -1.49
TCRBV5S1A1TA0A578 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.72□□□□□ -1.49
TCRBV5S1A1TA0A578 AL390119.1-201ENST00000440329 312 ntBASIC5.72□□□□□ -1.49
TCRBV5S1A1TA0A578 ELOCP16-201ENST00000444494 332 ntBASIC5.72□□□□□ -1.49
TCRBV5S1A1TA0A578 RPL36AP39-201ENST00000445859 318 ntBASIC5.72□□□□□ -1.49
TCRBV5S1A1TA0A578 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TCRBV5S1A1TA0A578 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.72□□□□□ -1.49
TCRBV5S1A1TA0A578 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TCRBV5S1A1TA0A578 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.72□□□□□ -1.49
TCRBV5S1A1TA0A578 RPL7P61-201ENST00000451721 751 ntBASIC5.72□□□□□ -1.49
TCRBV5S1A1TA0A578 AC069277.2-201ENST00000454211 432 ntBASIC5.72□□□□□ -1.49
TCRBV5S1A1TA0A578 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.72□□□□□ -1.49
TCRBV5S1A1TA0A578 IGBP1P4-201ENST00000503202 879 ntBASIC5.72□□□□□ -1.49
TCRBV5S1A1TA0A578 AC105420.1-201ENST00000504389 582 ntBASIC5.72□□□□□ -1.49
TCRBV5S1A1TA0A578 MTCO1P31-201ENST00000506355 492 ntBASIC5.72□□□□□ -1.49
TCRBV5S1A1TA0A578 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC5.72□□□□□ -1.49
TCRBV5S1A1TA0A578 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.72□□□□□ -1.49
TCRBV5S1A1TA0A578 AC121161.1-201ENST00000510606 652 ntBASIC5.72□□□□□ -1.49
TCRBV5S1A1TA0A578 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TCRBV5S1A1TA0A578 AC010376.1-201ENST00000522101 334 ntBASIC5.72□□□□□ -1.49
TCRBV5S1A1TA0A578 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.72□□□□□ -1.49
TCRBV5S1A1TA0A578 MORF4L1P3-201ENST00000525966 950 ntBASIC5.72□□□□□ -1.49
TCRBV5S1A1TA0A578 AP003066.2-201ENST00000529375 555 ntBASIC5.72□□□□□ -1.49
TCRBV5S1A1TA0A578 NPM1P35-201ENST00000533043 868 ntBASIC5.72□□□□□ -1.49
TCRBV5S1A1TA0A578 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.72□□□□□ -1.49
TCRBV5S1A1TA0A578 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC5.72□□□□□ -1.49
TCRBV5S1A1TA0A578 AC087888.1-201ENST00000550884 1254 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms