Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC4.6□□□□□ -1.67
TRAV27A0A087WT01 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC4.6□□□□□ -1.67
TRAV27A0A087WT01 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.6□□□□□ -1.67
TRAV27A0A087WT01 RPL7L1P9-201ENST00000431298 745 ntBASIC4.6□□□□□ -1.67
TRAV27A0A087WT01 RPL35AP21-201ENST00000437667 333 ntBASIC4.6□□□□□ -1.67
TRAV27A0A087WT01 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC4.6□□□□□ -1.67
TRAV27A0A087WT01 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.6□□□□□ -1.67
TRAV27A0A087WT01 AC012512.1-201ENST00000446594 718 ntBASIC4.6□□□□□ -1.67
TRAV27A0A087WT01 AC093166.2-201ENST00000455969 1017 ntBASIC4.6□□□□□ -1.67
TRAV27A0A087WT01 RN7SL443P-201ENST00000464331 290 ntBASIC4.6□□□□□ -1.67
TRAV27A0A087WT01 USP9YP2-201ENST00000504503 1000 ntBASIC4.6□□□□□ -1.67
TRAV27A0A087WT01 SSX6-203ENST00000509958 336 ntTSL 3 BASIC4.6□□□□□ -1.67
TRAV27A0A087WT01 NPM1P21-201ENST00000513394 762 ntBASIC4.6□□□□□ -1.67
TRAV27A0A087WT01 USP9YP1-201ENST00000513521 1002 ntBASIC4.6□□□□□ -1.67
TRAV27A0A087WT01 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC4.6□□□□□ -1.67
TRAV27A0A087WT01 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.6□□□□□ -1.67
TRAV27A0A087WT01 AC134349.2-201ENST00000535136 910 ntBASIC4.6□□□□□ -1.67
TRAV27A0A087WT01 LSM3P2-201ENST00000551246 273 ntBASIC4.6□□□□□ -1.67
TRAV27A0A087WT01 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC4.6□□□□□ -1.67
TRAV27A0A087WT01 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC4.6□□□□□ -1.67
TRAV27A0A087WT01 AC090888.3-201ENST00000558917 509 ntBASIC4.6□□□□□ -1.67
TRAV27A0A087WT01 NDUFB4P11-201ENST00000560510 395 ntBASIC4.6□□□□□ -1.67
TRAV27A0A087WT01 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TRAV27A0A087WT01 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC4.6□□□□□ -1.67
TRAV27A0A087WT01 AC079395.2-201ENST00000610982 737 ntBASIC4.6□□□□□ -1.67
TRAV27A0A087WT01 RPSAP73-201ENST00000614820 330 ntBASIC4.6□□□□□ -1.67
TRAV27A0A087WT01 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.6□□□□□ -1.67
TRAV27A0A087WT01 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
TRAV27A0A087WT01 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.6□□□□□ -1.67
TRAV27A0A087WT01 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.6□□□□□ -1.67
TRAV27A0A087WT01 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.6□□□□□ -1.67
TRAV27A0A087WT01 AL672167.1-204ENST00000641875 3017 ntBASIC4.6□□□□□ -1.67
TRAV27A0A087WT01 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.6□□□□□ -1.67
TRAV27A0A087WT01 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
TRAV27A0A087WT01 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRAV27A0A087WT01 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.6□□□□□ -1.67
TRAV27A0A087WT01 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
TRAV27A0A087WT01 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRAV27A0A087WT01 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRAV27A0A087WT01 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRAV27A0A087WT01 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRAV27A0A087WT01 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
TRAV27A0A087WT01 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
TRAV27A0A087WT01 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
TRAV27A0A087WT01 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
TRAV27A0A087WT01 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.59□□□□□ -1.67
TRAV27A0A087WT01 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.59□□□□□ -1.67
TRAV27A0A087WT01 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
TRAV27A0A087WT01 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
TRAV27A0A087WT01 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
TRAV27A0A087WT01 OR5M12P-201ENST00000423388 929 ntBASIC4.59□□□□□ -1.67
TRAV27A0A087WT01 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.59□□□□□ -1.67
TRAV27A0A087WT01 AC002069.1-201ENST00000429649 1159 ntBASIC4.59□□□□□ -1.67
TRAV27A0A087WT01 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.59□□□□□ -1.67
TRAV27A0A087WT01 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.59□□□□□ -1.67
TRAV27A0A087WT01 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.59□□□□□ -1.67
TRAV27A0A087WT01 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC4.59□□□□□ -1.67
TRAV27A0A087WT01 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.59□□□□□ -1.67
TRAV27A0A087WT01 AL157385.1-201ENST00000446973 268 ntBASIC4.59□□□□□ -1.67
TRAV27A0A087WT01 AC004980.3-201ENST00000447046 365 ntBASIC4.59□□□□□ -1.67
TRAV27A0A087WT01 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC4.59□□□□□ -1.67
TRAV27A0A087WT01 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC4.59□□□□□ -1.67
TRAV27A0A087WT01 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.59□□□□□ -1.67
TRAV27A0A087WT01 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.59□□□□□ -1.67
TRAV27A0A087WT01 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.59□□□□□ -1.67
TRAV27A0A087WT01 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC4.59□□□□□ -1.67
TRAV27A0A087WT01 AP001284.1-201ENST00000528393 2118 ntBASIC4.59□□□□□ -1.67
TRAV27A0A087WT01 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.59□□□□□ -1.67
TRAV27A0A087WT01 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.59□□□□□ -1.67
TRAV27A0A087WT01 AGGF1P9-201ENST00000561884 913 ntBASIC4.59□□□□□ -1.67
TRAV27A0A087WT01 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC4.59□□□□□ -1.67
TRAV27A0A087WT01 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
TRAV27A0A087WT01 AC011493.1-201ENST00000596753 1632 ntBASIC4.59□□□□□ -1.67
TRAV27A0A087WT01 Z95327.3-201ENST00000610385 572 ntBASIC4.59□□□□□ -1.67
TRAV27A0A087WT01 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.59□□□□□ -1.67
TRAV27A0A087WT01 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC4.59□□□□□ -1.67
TRAV27A0A087WT01 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC4.59□□□□□ -1.67
TRAV27A0A087WT01 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.68
TRAV27A0A087WT01 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.68
TRAV27A0A087WT01 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.59□□□□□ -1.68
TRAV27A0A087WT01 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.59□□□□□ -1.68
TRAV27A0A087WT01 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
TRAV27A0A087WT01 AC125336.1-201ENST00000508893 2827 ntBASIC4.59□□□□□ -1.68
TRAV27A0A087WT01 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
TRAV27A0A087WT01 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.58□□□□□ -1.68
TRAV27A0A087WT01 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.58□□□□□ -1.68
TRAV27A0A087WT01 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.58□□□□□ -1.68
TRAV27A0A087WT01 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
TRAV27A0A087WT01 AL132656.3-201ENST00000606384 1595 ntBASIC4.58□□□□□ -1.68
TRAV27A0A087WT01 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
TRAV27A0A087WT01 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.58□□□□□ -1.68
TRAV27A0A087WT01 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
TRAV27A0A087WT01 TCP11X1-202ENST00000622971 1372 ntBASIC4.58□□□□□ -1.68
TRAV27A0A087WT01 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
TRAV27A0A087WT01 RN7SKP113-201ENST00000363891 295 ntBASIC4.58□□□□□ -1.68
TRAV27A0A087WT01 NUDT19P3-201ENST00000404698 555 ntBASIC4.58□□□□□ -1.68
TRAV27A0A087WT01 AC108075.1-201ENST00000424692 529 ntBASIC4.58□□□□□ -1.68
TRAV27A0A087WT01 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.58□□□□□ -1.68
TRAV27A0A087WT01 BX323845.1-201ENST00000432417 179 ntBASIC4.58□□□□□ -1.68
TRAV27A0A087WT01 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 148.2 ms