Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
RPAP1Q9BWH6 AL078621.3-201ENST00000623707 2042 ntBASIC6.4□□□□□ -1.38
RPAP1Q9BWH6 ABCC13-202ENST00000463099 3842 ntBASIC6.4□□□□□ -1.38
RPAP1Q9BWH6 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
RPAP1Q9BWH6 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
RPAP1Q9BWH6 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC6.4□□□□□ -1.38
RPAP1Q9BWH6 BCORP1-203ENST00000513194 5093 ntBASIC6.4□□□□□ -1.38
RPAP1Q9BWH6 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
RPAP1Q9BWH6 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC6.4□□□□□ -1.38
RPAP1Q9BWH6 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC6.4□□□□□ -1.38
RPAP1Q9BWH6 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
RPAP1Q9BWH6 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC6.4□□□□□ -1.39
RPAP1Q9BWH6 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
RPAP1Q9BWH6 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
RPAP1Q9BWH6 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC6.4□□□□□ -1.39
RPAP1Q9BWH6 AL139128.1-201ENST00000413921 941 ntBASIC6.4□□□□□ -1.39
RPAP1Q9BWH6 REREP1Y-201ENST00000422655 198 ntBASIC6.4□□□□□ -1.39
RPAP1Q9BWH6 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
RPAP1Q9BWH6 AC124944.2-201ENST00000429866 1242 ntBASIC6.4□□□□□ -1.39
RPAP1Q9BWH6 REREP2Y-201ENST00000439103 200 ntBASIC6.4□□□□□ -1.39
RPAP1Q9BWH6 AC016772.1-201ENST00000444170 1261 ntBASIC6.4□□□□□ -1.39
RPAP1Q9BWH6 Z92846.1-201ENST00000456203 268 ntBASIC6.4□□□□□ -1.39
RPAP1Q9BWH6 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC6.4□□□□□ -1.39
RPAP1Q9BWH6 AC058823.1-201ENST00000485315 474 ntBASIC6.4□□□□□ -1.39
RPAP1Q9BWH6 RN7SL423P-201ENST00000486202 304 ntBASIC6.4□□□□□ -1.39
RPAP1Q9BWH6 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC6.4□□□□□ -1.39
RPAP1Q9BWH6 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC6.4□□□□□ -1.39
RPAP1Q9BWH6 AC138832.1-201ENST00000522871 556 ntBASIC6.4□□□□□ -1.39
RPAP1Q9BWH6 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC6.4□□□□□ -1.39
RPAP1Q9BWH6 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC6.4□□□□□ -1.39
RPAP1Q9BWH6 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC6.4□□□□□ -1.39
RPAP1Q9BWH6 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC6.4□□□□□ -1.39
RPAP1Q9BWH6 AC002069.2-201ENST00000603580 883 ntBASIC6.4□□□□□ -1.39
RPAP1Q9BWH6 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
RPAP1Q9BWH6 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC6.4□□□□□ -1.39
RPAP1Q9BWH6 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.39
RPAP1Q9BWH6 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
RPAP1Q9BWH6 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
RPAP1Q9BWH6 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
RPAP1Q9BWH6 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
RPAP1Q9BWH6 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
RPAP1Q9BWH6 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC6.39□□□□□ -1.39
RPAP1Q9BWH6 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
RPAP1Q9BWH6 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.39□□□□□ -1.39
RPAP1Q9BWH6 RN7SKP104-201ENST00000362605 328 ntBASIC6.39□□□□□ -1.39
RPAP1Q9BWH6 RNU4-4P-201ENST00000364588 130 ntBASIC6.39□□□□□ -1.39
RPAP1Q9BWH6 DNAJA1P4-201ENST00000406473 1166 ntBASIC6.39□□□□□ -1.39
RPAP1Q9BWH6 RNU6ATAC21P-201ENST00000408656 126 ntBASIC6.39□□□□□ -1.39
RPAP1Q9BWH6 RN7SKP126-201ENST00000411143 300 ntBASIC6.39□□□□□ -1.39
RPAP1Q9BWH6 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC6.39□□□□□ -1.39
RPAP1Q9BWH6 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC6.39□□□□□ -1.39
RPAP1Q9BWH6 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC6.39□□□□□ -1.39
RPAP1Q9BWH6 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC6.39□□□□□ -1.39
RPAP1Q9BWH6 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC6.39□□□□□ -1.39
RPAP1Q9BWH6 AC027369.5-201ENST00000533838 755 ntBASIC6.39□□□□□ -1.39
RPAP1Q9BWH6 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
RPAP1Q9BWH6 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC6.39□□□□□ -1.39
RPAP1Q9BWH6 AC005252.1-201ENST00000604518 1063 ntBASIC6.39□□□□□ -1.39
RPAP1Q9BWH6 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
RPAP1Q9BWH6 PANDAR-201ENST00000629595 1506 ntBASIC6.39□□□□□ -1.39
RPAP1Q9BWH6 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
RPAP1Q9BWH6 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
RPAP1Q9BWH6 ADAM5-202ENST00000399789 1942 ntBASIC6.39□□□□□ -1.39
RPAP1Q9BWH6 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.39□□□□□ -1.39
RPAP1Q9BWH6 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
RPAP1Q9BWH6 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
RPAP1Q9BWH6 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
RPAP1Q9BWH6 TEK-205ENST00000615002 4666 ntTSL 5 BASIC6.38□□□□□ -1.39
RPAP1Q9BWH6 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RPAP1Q9BWH6 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
RPAP1Q9BWH6 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RPAP1Q9BWH6 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RPAP1Q9BWH6 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC6.38□□□□□ -1.39
RPAP1Q9BWH6 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
RPAP1Q9BWH6 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC6.38□□□□□ -1.39
RPAP1Q9BWH6 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC6.38□□□□□ -1.39
RPAP1Q9BWH6 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RPAP1Q9BWH6 RBMY2QP-201ENST00000429799 1147 ntBASIC6.38□□□□□ -1.39
RPAP1Q9BWH6 RPL19P16-201ENST00000433839 588 ntBASIC6.38□□□□□ -1.39
RPAP1Q9BWH6 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RPAP1Q9BWH6 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC6.38□□□□□ -1.39
RPAP1Q9BWH6 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC6.38□□□□□ -1.39
RPAP1Q9BWH6 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC6.38□□□□□ -1.39
RPAP1Q9BWH6 PRPF38AP1-201ENST00000451976 933 ntBASIC6.38□□□□□ -1.39
RPAP1Q9BWH6 AC104634.1-201ENST00000452720 462 ntBASIC6.38□□□□□ -1.39
RPAP1Q9BWH6 DNAJB5P1-201ENST00000454004 806 ntBASIC6.38□□□□□ -1.39
RPAP1Q9BWH6 AC093827.1-201ENST00000480094 861 ntBASIC6.38□□□□□ -1.39
RPAP1Q9BWH6 RN7SL814P-201ENST00000487715 300 ntBASIC6.38□□□□□ -1.39
RPAP1Q9BWH6 RPS12P31-201ENST00000491419 398 ntBASIC6.38□□□□□ -1.39
RPAP1Q9BWH6 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC6.38□□□□□ -1.39
RPAP1Q9BWH6 RNA5SP228-201ENST00000516232 133 ntBASIC6.38□□□□□ -1.39
RPAP1Q9BWH6 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC6.38□□□□□ -1.39
RPAP1Q9BWH6 AC022360.1-201ENST00000521058 340 ntBASIC6.38□□□□□ -1.39
RPAP1Q9BWH6 OR5AZ1P-201ENST00000527448 943 ntBASIC6.38□□□□□ -1.39
RPAP1Q9BWH6 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC6.38□□□□□ -1.39
RPAP1Q9BWH6 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC6.38□□□□□ -1.39
RPAP1Q9BWH6 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC6.38□□□□□ -1.39
RPAP1Q9BWH6 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RPAP1Q9BWH6 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RPAP1Q9BWH6 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms