Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC104164.1-201ENST00000460282 590 ntBASIC6.27□□□□□ -1.41
CDK5RAP1Q96SZ6 AC090589.1-201ENST00000473109 362 ntBASIC6.27□□□□□ -1.41
CDK5RAP1Q96SZ6 RN7SL205P-201ENST00000490174 284 ntBASIC6.27□□□□□ -1.41
CDK5RAP1Q96SZ6 CCDC11P1-201ENST00000503137 1162 ntBASIC6.27□□□□□ -1.41
CDK5RAP1Q96SZ6 AC091860.1-201ENST00000505723 432 ntBASIC6.27□□□□□ -1.41
CDK5RAP1Q96SZ6 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.27□□□□□ -1.41
CDK5RAP1Q96SZ6 OR4A2P-201ENST00000527276 913 ntBASIC6.27□□□□□ -1.41
CDK5RAP1Q96SZ6 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC6.27□□□□□ -1.41
CDK5RAP1Q96SZ6 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC6.27□□□□□ -1.41
CDK5RAP1Q96SZ6 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC6.27□□□□□ -1.41
CDK5RAP1Q96SZ6 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.27□□□□□ -1.41
CDK5RAP1Q96SZ6 NANOGNBP2-201ENST00000544753 553 ntBASIC6.27□□□□□ -1.41
CDK5RAP1Q96SZ6 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC6.27□□□□□ -1.41
CDK5RAP1Q96SZ6 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC6.27□□□□□ -1.41
CDK5RAP1Q96SZ6 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
CDK5RAP1Q96SZ6 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC6.27□□□□□ -1.41
CDK5RAP1Q96SZ6 AGGF1P9-201ENST00000561884 913 ntBASIC6.27□□□□□ -1.41
CDK5RAP1Q96SZ6 AC007494.1-201ENST00000562293 760 ntBASIC6.27□□□□□ -1.41
CDK5RAP1Q96SZ6 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC6.27□□□□□ -1.41
CDK5RAP1Q96SZ6 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC6.27□□□□□ -1.41
CDK5RAP1Q96SZ6 MIR4776-2-201ENST00000580204 80 ntBASIC6.27□□□□□ -1.41
CDK5RAP1Q96SZ6 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
CDK5RAP1Q96SZ6 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC6.27□□□□□ -1.41
CDK5RAP1Q96SZ6 AC087468.1-201ENST00000604365 630 ntBASIC6.27□□□□□ -1.41
CDK5RAP1Q96SZ6 AC239868.4-201ENST00000608318 671 ntBASIC6.27□□□□□ -1.41
CDK5RAP1Q96SZ6 AC103591.3-201ENST00000608684 209 ntBASIC6.27□□□□□ -1.41
CDK5RAP1Q96SZ6 AP005229.2-201ENST00000609980 697 ntBASIC6.27□□□□□ -1.41
CDK5RAP1Q96SZ6 AC092106.3-201ENST00000611308 722 ntBASIC6.27□□□□□ -1.41
CDK5RAP1Q96SZ6 MIR6809-201ENST00000612189 116 ntBASIC6.27□□□□□ -1.41
CDK5RAP1Q96SZ6 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
CDK5RAP1Q96SZ6 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC6.27□□□□□ -1.41
CDK5RAP1Q96SZ6 FRG1EP-201ENST00000634469 770 ntBASIC6.27□□□□□ -1.41
CDK5RAP1Q96SZ6 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CDK5RAP1Q96SZ6 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CDK5RAP1Q96SZ6 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.27□□□□□ -1.41
CDK5RAP1Q96SZ6 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.27□□□□□ -1.41
CDK5RAP1Q96SZ6 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
CDK5RAP1Q96SZ6 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CDK5RAP1Q96SZ6 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CDK5RAP1Q96SZ6 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CDK5RAP1Q96SZ6 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CDK5RAP1Q96SZ6 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CDK5RAP1Q96SZ6 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
CDK5RAP1Q96SZ6 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CDK5RAP1Q96SZ6 AC027088.4-201ENST00000611559 1947 ntBASIC6.27□□□□□ -1.41
CDK5RAP1Q96SZ6 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.27□□□□□ -1.41
CDK5RAP1Q96SZ6 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC6.26□□□□□ -1.41
CDK5RAP1Q96SZ6 AC119674.1-202ENST00000641333 1860 ntBASIC6.26□□□□□ -1.41
CDK5RAP1Q96SZ6 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CDK5RAP1Q96SZ6 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CDK5RAP1Q96SZ6 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CDK5RAP1Q96SZ6 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC6.26□□□□□ -1.41
CDK5RAP1Q96SZ6 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CDK5RAP1Q96SZ6 ELL2P3-201ENST00000457883 1602 ntBASIC6.26□□□□□ -1.41
CDK5RAP1Q96SZ6 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.26□□□□□ -1.41
CDK5RAP1Q96SZ6 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
CDK5RAP1Q96SZ6 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CDK5RAP1Q96SZ6 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
CDK5RAP1Q96SZ6 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CDK5RAP1Q96SZ6 RNU6-670P-201ENST00000364312 104 ntBASIC6.26□□□□□ -1.41
CDK5RAP1Q96SZ6 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CDK5RAP1Q96SZ6 RNU6-1242P-201ENST00000391052 103 ntBASIC6.26□□□□□ -1.41
CDK5RAP1Q96SZ6 NPM1P37-201ENST00000403105 874 ntBASIC6.26□□□□□ -1.41
CDK5RAP1Q96SZ6 SNRPEP6-201ENST00000407465 277 ntBASIC6.26□□□□□ -1.41
CDK5RAP1Q96SZ6 AF274854.1-201ENST00000413236 615 ntBASIC6.26□□□□□ -1.41
CDK5RAP1Q96SZ6 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.26□□□□□ -1.41
CDK5RAP1Q96SZ6 RPL35AP3-201ENST00000414680 288 ntBASIC6.26□□□□□ -1.41
CDK5RAP1Q96SZ6 RAD23BP2-201ENST00000416003 1207 ntBASIC6.26□□□□□ -1.41
CDK5RAP1Q96SZ6 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.26□□□□□ -1.41
CDK5RAP1Q96SZ6 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC6.26□□□□□ -1.41
CDK5RAP1Q96SZ6 NME1P1-201ENST00000420914 382 ntBASIC6.26□□□□□ -1.41
CDK5RAP1Q96SZ6 AL035660.1-201ENST00000422041 222 ntBASIC6.26□□□□□ -1.41
CDK5RAP1Q96SZ6 AC241520.1-201ENST00000422654 1099 ntBASIC6.26□□□□□ -1.41
CDK5RAP1Q96SZ6 MTND4P24-201ENST00000424002 397 ntBASIC6.26□□□□□ -1.41
CDK5RAP1Q96SZ6 AL365396.1-201ENST00000430854 671 ntBASIC6.26□□□□□ -1.41
CDK5RAP1Q96SZ6 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC6.26□□□□□ -1.41
CDK5RAP1Q96SZ6 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC6.26□□□□□ -1.41
CDK5RAP1Q96SZ6 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC6.26□□□□□ -1.41
CDK5RAP1Q96SZ6 ARL4AP3-201ENST00000441452 574 ntBASIC6.26□□□□□ -1.41
CDK5RAP1Q96SZ6 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC6.26□□□□□ -1.41
CDK5RAP1Q96SZ6 AC090114.3-201ENST00000479267 829 ntBASIC6.26□□□□□ -1.41
CDK5RAP1Q96SZ6 RPS3AP22-201ENST00000488297 769 ntBASIC6.26□□□□□ -1.41
CDK5RAP1Q96SZ6 RN7SL193P-201ENST00000491708 276 ntBASIC6.26□□□□□ -1.41
CDK5RAP1Q96SZ6 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.26□□□□□ -1.41
CDK5RAP1Q96SZ6 AC104685.1-201ENST00000502445 371 ntBASIC6.26□□□□□ -1.41
CDK5RAP1Q96SZ6 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC6.26□□□□□ -1.41
CDK5RAP1Q96SZ6 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.26□□□□□ -1.41
CDK5RAP1Q96SZ6 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.26□□□□□ -1.41
CDK5RAP1Q96SZ6 AC119751.1-201ENST00000513357 765 ntBASIC6.26□□□□□ -1.41
CDK5RAP1Q96SZ6 RNU6-1334P-201ENST00000516032 105 ntBASIC6.26□□□□□ -1.41
CDK5RAP1Q96SZ6 Y_RNA.667-201ENST00000516212 107 ntBASIC6.26□□□□□ -1.41
CDK5RAP1Q96SZ6 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC6.26□□□□□ -1.41
CDK5RAP1Q96SZ6 AP000648.1-201ENST00000529682 397 ntBASIC6.26□□□□□ -1.41
CDK5RAP1Q96SZ6 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CDK5RAP1Q96SZ6 AP004609.2-201ENST00000532177 190 ntBASIC6.26□□□□□ -1.41
CDK5RAP1Q96SZ6 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC6.26□□□□□ -1.41
CDK5RAP1Q96SZ6 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC6.26□□□□□ -1.41
CDK5RAP1Q96SZ6 OR4A6P-201ENST00000534364 970 ntBASIC6.26□□□□□ -1.41
CDK5RAP1Q96SZ6 CYB5AP5-201ENST00000549779 389 ntBASIC6.26□□□□□ -1.41
CDK5RAP1Q96SZ6 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms