Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC6□□□□□ -1.45
CDK5RAP2Q96SN8 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CDK5RAP2Q96SN8 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC6□□□□□ -1.45
CDK5RAP2Q96SN8 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
CDK5RAP2Q96SN8 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC6□□□□□ -1.45
CDK5RAP2Q96SN8 AL137845.2-201ENST00000444292 988 ntBASIC6□□□□□ -1.45
CDK5RAP2Q96SN8 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC6□□□□□ -1.45
CDK5RAP2Q96SN8 AC010733.1-201ENST00000451515 401 ntBASIC6□□□□□ -1.45
CDK5RAP2Q96SN8 OR51A1P-201ENST00000511110 946 ntBASIC6□□□□□ -1.45
CDK5RAP2Q96SN8 AC111000.6-201ENST00000514471 709 ntBASIC6□□□□□ -1.45
CDK5RAP2Q96SN8 PRPF19P1-201ENST00000584766 898 ntBASIC6□□□□□ -1.45
CDK5RAP2Q96SN8 uc_338.7-201ENST00000621834 124 ntBASIC6□□□□□ -1.45
CDK5RAP2Q96SN8 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC6□□□□□ -1.45
CDK5RAP2Q96SN8 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6□□□□□ -1.45
CDK5RAP2Q96SN8 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC6□□□□□ -1.45
CDK5RAP2Q96SN8 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC6□□□□□ -1.45
CDK5RAP2Q96SN8 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
CDK5RAP2Q96SN8 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
CDK5RAP2Q96SN8 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC6□□□□□ -1.45
CDK5RAP2Q96SN8 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CDK5RAP2Q96SN8 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CDK5RAP2Q96SN8 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.99□□□□□ -1.45
CDK5RAP2Q96SN8 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CDK5RAP2Q96SN8 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.99□□□□□ -1.45
CDK5RAP2Q96SN8 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
CDK5RAP2Q96SN8 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CDK5RAP2Q96SN8 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.99□□□□□ -1.45
CDK5RAP2Q96SN8 AC022893.2-201ENST00000564832 3296 ntBASIC5.99□□□□□ -1.45
CDK5RAP2Q96SN8 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
CDK5RAP2Q96SN8 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.99□□□□□ -1.45
CDK5RAP2Q96SN8 RPS29P9-201ENST00000440360 171 ntBASIC5.99□□□□□ -1.45
CDK5RAP2Q96SN8 IGHV5-78-201ENST00000450948 295 ntBASIC5.99□□□□□ -1.45
CDK5RAP2Q96SN8 RPL7P40-201ENST00000481703 745 ntBASIC5.99□□□□□ -1.45
CDK5RAP2Q96SN8 MIR4330-201ENST00000579077 105 ntBASIC5.99□□□□□ -1.45
CDK5RAP2Q96SN8 MIR4270-201ENST00000581799 70 ntBASIC5.99□□□□□ -1.45
CDK5RAP2Q96SN8 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
CDK5RAP2Q96SN8 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CDK5RAP2Q96SN8 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CDK5RAP2Q96SN8 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CDK5RAP2Q96SN8 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CDK5RAP2Q96SN8 RNA5SP453-201ENST00000362503 119 ntBASIC5.98□□□□□ -1.45
CDK5RAP2Q96SN8 MIR141-201ENST00000384975 95 ntBASIC5.98□□□□□ -1.45
CDK5RAP2Q96SN8 AL807761.1-201ENST00000417622 171 ntBASIC5.98□□□□□ -1.45
CDK5RAP2Q96SN8 AC019050.1-201ENST00000418508 492 ntBASIC5.98□□□□□ -1.45
CDK5RAP2Q96SN8 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.98□□□□□ -1.45
CDK5RAP2Q96SN8 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.98□□□□□ -1.45
CDK5RAP2Q96SN8 AC073264.2-201ENST00000448886 166 ntBASIC5.98□□□□□ -1.45
CDK5RAP2Q96SN8 PRPF38AP1-201ENST00000451976 933 ntBASIC5.98□□□□□ -1.45
CDK5RAP2Q96SN8 HNRNPDLP2-201ENST00000455248 751 ntBASIC5.98□□□□□ -1.45
CDK5RAP2Q96SN8 AC096741.1-201ENST00000472250 846 ntBASIC5.98□□□□□ -1.45
CDK5RAP2Q96SN8 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.98□□□□□ -1.45
CDK5RAP2Q96SN8 HMGN2P25-201ENST00000486956 268 ntBASIC5.98□□□□□ -1.45
CDK5RAP2Q96SN8 RPL23AP72-201ENST00000492447 435 ntBASIC5.98□□□□□ -1.45
CDK5RAP2Q96SN8 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.98□□□□□ -1.45
CDK5RAP2Q96SN8 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.98□□□□□ -1.45
CDK5RAP2Q96SN8 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CDK5RAP2Q96SN8 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.98□□□□□ -1.45
CDK5RAP2Q96SN8 GSTP1P1-201ENST00000548078 319 ntBASIC5.98□□□□□ -1.45
CDK5RAP2Q96SN8 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.98□□□□□ -1.45
CDK5RAP2Q96SN8 AC008745.1-201ENST00000604064 271 ntBASIC5.98□□□□□ -1.45
CDK5RAP2Q96SN8 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.98□□□□□ -1.45
CDK5RAP2Q96SN8 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.98□□□□□ -1.45
CDK5RAP2Q96SN8 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CDK5RAP2Q96SN8 AC131971.1-201ENST00000332881 1482 ntBASIC5.98□□□□□ -1.45
CDK5RAP2Q96SN8 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CDK5RAP2Q96SN8 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CDK5RAP2Q96SN8 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CDK5RAP2Q96SN8 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CDK5RAP2Q96SN8 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.98□□□□□ -1.45
CDK5RAP2Q96SN8 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CDK5RAP2Q96SN8 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
CDK5RAP2Q96SN8 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.98□□□□□ -1.45
CDK5RAP2Q96SN8 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CDK5RAP2Q96SN8 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.98□□□□□ -1.45
CDK5RAP2Q96SN8 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
CDK5RAP2Q96SN8 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CDK5RAP2Q96SN8 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
CDK5RAP2Q96SN8 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
CDK5RAP2Q96SN8 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.98□□□□□ -1.45
CDK5RAP2Q96SN8 CYB5AP4-201ENST00000396692 399 ntBASIC5.98□□□□□ -1.45
CDK5RAP2Q96SN8 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.98□□□□□ -1.45
CDK5RAP2Q96SN8 MRPS21P3-201ENST00000436696 262 ntBASIC5.98□□□□□ -1.45
CDK5RAP2Q96SN8 TXNP5-201ENST00000441043 315 ntBASIC5.98□□□□□ -1.45
CDK5RAP2Q96SN8 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.98□□□□□ -1.45
CDK5RAP2Q96SN8 HMGB1P4-201ENST00000455362 567 ntBASIC5.98□□□□□ -1.45
CDK5RAP2Q96SN8 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC5.98□□□□□ -1.45
CDK5RAP2Q96SN8 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.98□□□□□ -1.45
CDK5RAP2Q96SN8 UBE2FP2-201ENST00000566646 462 ntBASIC5.98□□□□□ -1.45
CDK5RAP2Q96SN8 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.98□□□□□ -1.45
CDK5RAP2Q96SN8 MIR6758-201ENST00000620653 63 ntBASIC5.98□□□□□ -1.45
CDK5RAP2Q96SN8 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.98□□□□□ -1.45
CDK5RAP2Q96SN8 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.98□□□□□ -1.45
CDK5RAP2Q96SN8 CASC19-260ENST00000641828 2001 ntBASIC5.98□□□□□ -1.45
CDK5RAP2Q96SN8 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC5.98□□□□□ -1.45
CDK5RAP2Q96SN8 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
CDK5RAP2Q96SN8 SAMMSON-210ENST00000641260 1308 ntBASIC5.97□□□□□ -1.45
CDK5RAP2Q96SN8 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CDK5RAP2Q96SN8 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
CDK5RAP2Q96SN8 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
CDK5RAP2Q96SN8 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms