Protein–RNA interactions for Protein: Q96QK1

VPS35, Vacuolar protein sorting-associated protein 35, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35Q96QK1 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.35□□□□□ -1.55
VPS35Q96QK1 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
VPS35Q96QK1 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.35□□□□□ -1.55
VPS35Q96QK1 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
VPS35Q96QK1 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.35□□□□□ -1.55
VPS35Q96QK1 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.35□□□□□ -1.55
VPS35Q96QK1 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
VPS35Q96QK1 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.34□□□□□ -1.55
VPS35Q96QK1 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.34□□□□□ -1.55
VPS35Q96QK1 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
VPS35Q96QK1 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.34□□□□□ -1.55
VPS35Q96QK1 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
VPS35Q96QK1 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
VPS35Q96QK1 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
VPS35Q96QK1 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
VPS35Q96QK1 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
VPS35Q96QK1 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
VPS35Q96QK1 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
VPS35Q96QK1 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.34□□□□□ -1.55
VPS35Q96QK1 SNORA51.1-201ENST00000363243 140 ntBASIC5.34□□□□□ -1.55
VPS35Q96QK1 MIR323B-201ENST00000385269 82 ntBASIC5.34□□□□□ -1.55
VPS35Q96QK1 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
VPS35Q96QK1 RNU1-77P-201ENST00000390868 162 ntBASIC5.34□□□□□ -1.55
VPS35Q96QK1 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC5.34□□□□□ -1.55
VPS35Q96QK1 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
VPS35Q96QK1 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.34□□□□□ -1.55
VPS35Q96QK1 NPM1P18-201ENST00000434232 732 ntBASIC5.34□□□□□ -1.55
VPS35Q96QK1 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.34□□□□□ -1.55
VPS35Q96QK1 RPS11P7-201ENST00000442125 465 ntBASIC5.34□□□□□ -1.55
VPS35Q96QK1 ABCC13-202ENST00000463099 3842 ntBASIC5.34□□□□□ -1.55
VPS35Q96QK1 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC5.34□□□□□ -1.55
VPS35Q96QK1 AP000797.2-201ENST00000475768 606 ntBASIC5.34□□□□□ -1.55
VPS35Q96QK1 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.34□□□□□ -1.55
VPS35Q96QK1 AL133372.1-201ENST00000493565 745 ntBASIC5.34□□□□□ -1.55
VPS35Q96QK1 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC5.34□□□□□ -1.55
VPS35Q96QK1 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.34□□□□□ -1.55
VPS35Q96QK1 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.34□□□□□ -1.55
VPS35Q96QK1 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC5.34□□□□□ -1.55
VPS35Q96QK1 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.34□□□□□ -1.55
VPS35Q96QK1 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
VPS35Q96QK1 AP004607.2-201ENST00000533949 322 ntBASIC5.34□□□□□ -1.55
VPS35Q96QK1 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.34□□□□□ -1.55
VPS35Q96QK1 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.34□□□□□ -1.55
VPS35Q96QK1 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
VPS35Q96QK1 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
VPS35Q96QK1 RBM22P1-201ENST00000578589 1214 ntBASIC5.34□□□□□ -1.55
VPS35Q96QK1 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
VPS35Q96QK1 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.34□□□□□ -1.55
VPS35Q96QK1 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.34□□□□□ -1.55
VPS35Q96QK1 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.34□□□□□ -1.55
VPS35Q96QK1 AC007786.3-201ENST00000615154 596 ntBASIC5.34□□□□□ -1.55
VPS35Q96QK1 AC074101.1-201ENST00000637861 241 ntBASIC5.34□□□□□ -1.55
VPS35Q96QK1 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.34□□□□□ -1.55
VPS35Q96QK1 AL360270.2-201ENST00000562952 5985 ntBASIC5.34□□□□□ -1.55
VPS35Q96QK1 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
VPS35Q96QK1 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
VPS35Q96QK1 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
VPS35Q96QK1 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.56
VPS35Q96QK1 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.56
VPS35Q96QK1 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.33□□□□□ -1.56
VPS35Q96QK1 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
VPS35Q96QK1 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
VPS35Q96QK1 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.33□□□□□ -1.56
VPS35Q96QK1 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.33□□□□□ -1.56
VPS35Q96QK1 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.33□□□□□ -1.56
VPS35Q96QK1 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
VPS35Q96QK1 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
VPS35Q96QK1 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
VPS35Q96QK1 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
VPS35Q96QK1 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
VPS35Q96QK1 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
VPS35Q96QK1 SNORA70.6-201ENST00000383934 134 ntBASIC5.33□□□□□ -1.56
VPS35Q96QK1 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
VPS35Q96QK1 SETP15-201ENST00000412724 337 ntBASIC5.33□□□□□ -1.56
VPS35Q96QK1 RPL12P43-201ENST00000420608 499 ntBASIC5.33□□□□□ -1.56
VPS35Q96QK1 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.33□□□□□ -1.56
VPS35Q96QK1 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.33□□□□□ -1.56
VPS35Q96QK1 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.33□□□□□ -1.56
VPS35Q96QK1 RPS26P41-201ENST00000450370 284 ntBASIC5.33□□□□□ -1.56
VPS35Q96QK1 COPS8P2-201ENST00000473228 627 ntBASIC5.33□□□□□ -1.56
VPS35Q96QK1 OR2AO1P-201ENST00000476497 403 ntBASIC5.33□□□□□ -1.56
VPS35Q96QK1 RPL5P22-201ENST00000480199 884 ntBASIC5.33□□□□□ -1.56
VPS35Q96QK1 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.33□□□□□ -1.56
VPS35Q96QK1 AP000926.3-201ENST00000497201 299 ntBASIC5.33□□□□□ -1.56
VPS35Q96QK1 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.33□□□□□ -1.56
VPS35Q96QK1 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.33□□□□□ -1.56
VPS35Q96QK1 AC011411.1-201ENST00000509592 876 ntBASIC5.33□□□□□ -1.56
VPS35Q96QK1 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC5.33□□□□□ -1.56
VPS35Q96QK1 SNORD116-30-201ENST00000516468 85 ntBASIC5.33□□□□□ -1.56
VPS35Q96QK1 RNA5SP230-201ENST00000517039 122 ntBASIC5.33□□□□□ -1.56
VPS35Q96QK1 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
VPS35Q96QK1 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.33□□□□□ -1.56
VPS35Q96QK1 OR4A43P-201ENST00000532938 908 ntBASIC5.33□□□□□ -1.56
VPS35Q96QK1 OR8G3P-201ENST00000533406 921 ntBASIC5.33□□□□□ -1.56
VPS35Q96QK1 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.33□□□□□ -1.56
VPS35Q96QK1 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
VPS35Q96QK1 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.33□□□□□ -1.56
VPS35Q96QK1 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC5.33□□□□□ -1.56
VPS35Q96QK1 AC008833.1-201ENST00000611633 691 ntBASIC5.33□□□□□ -1.56
VPS35Q96QK1 AC244107.2-201ENST00000611773 76 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms