Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.77□□□□□ -1.49
VPS50Q96JG6 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.77□□□□□ -1.49
VPS50Q96JG6 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.77□□□□□ -1.49
VPS50Q96JG6 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.77□□□□□ -1.49
VPS50Q96JG6 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.77□□□□□ -1.49
VPS50Q96JG6 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.77□□□□□ -1.49
VPS50Q96JG6 AC073137.1-201ENST00000605636 634 ntBASIC5.77□□□□□ -1.49
VPS50Q96JG6 AC108865.2-201ENST00000606881 432 ntBASIC5.77□□□□□ -1.49
VPS50Q96JG6 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.77□□□□□ -1.49
VPS50Q96JG6 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.77□□□□□ -1.49
VPS50Q96JG6 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC5.77□□□□□ -1.49
VPS50Q96JG6 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.77□□□□□ -1.49
VPS50Q96JG6 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.77□□□□□ -1.49
VPS50Q96JG6 METTL8-218ENST00000638989 876 ntTSL 5 BASIC5.77□□□□□ -1.49
VPS50Q96JG6 METTL8-219ENST00000640734 726 ntTSL 2 BASIC5.77□□□□□ -1.49
VPS50Q96JG6 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
VPS50Q96JG6 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
VPS50Q96JG6 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
VPS50Q96JG6 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
VPS50Q96JG6 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
VPS50Q96JG6 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
VPS50Q96JG6 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.77□□□□□ -1.49
VPS50Q96JG6 AC004076.2-201ENST00000620532 3323 ntBASIC5.77□□□□□ -1.49
VPS50Q96JG6 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
VPS50Q96JG6 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
VPS50Q96JG6 AC002525.1-201ENST00000624392 1622 ntBASIC5.77□□□□□ -1.49
VPS50Q96JG6 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.77□□□□□ -1.49
VPS50Q96JG6 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.77□□□□□ -1.49
VPS50Q96JG6 AC005005.4-201ENST00000623789 16698 ntBASIC5.77□□□□□ -1.49
VPS50Q96JG6 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
VPS50Q96JG6 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
VPS50Q96JG6 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.76□□□□□ -1.49
VPS50Q96JG6 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.76□□□□□ -1.49
VPS50Q96JG6 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.76□□□□□ -1.49
VPS50Q96JG6 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
VPS50Q96JG6 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.76□□□□□ -1.49
VPS50Q96JG6 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.76□□□□□ -1.49
VPS50Q96JG6 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
VPS50Q96JG6 AC010132.2-201ENST00000295493 1043 ntBASIC5.76□□□□□ -1.49
VPS50Q96JG6 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
VPS50Q96JG6 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
VPS50Q96JG6 RNU6-354P-201ENST00000383862 107 ntBASIC5.76□□□□□ -1.49
VPS50Q96JG6 RNU6-610P-201ENST00000384264 107 ntBASIC5.76□□□□□ -1.49
VPS50Q96JG6 AL445183.3-201ENST00000414168 502 ntBASIC5.76□□□□□ -1.49
VPS50Q96JG6 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.76□□□□□ -1.49
VPS50Q96JG6 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
VPS50Q96JG6 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.76□□□□□ -1.49
VPS50Q96JG6 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC5.76□□□□□ -1.49
VPS50Q96JG6 NPM1P18-201ENST00000434232 732 ntBASIC5.76□□□□□ -1.49
VPS50Q96JG6 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
VPS50Q96JG6 AC005077.1-201ENST00000449226 375 ntBASIC5.76□□□□□ -1.49
VPS50Q96JG6 AL009048.1-201ENST00000450437 298 ntBASIC5.76□□□□□ -1.49
VPS50Q96JG6 SETP6-201ENST00000479329 568 ntBASIC5.76□□□□□ -1.49
VPS50Q96JG6 AC124945.1-201ENST00000485133 188 ntBASIC5.76□□□□□ -1.49
VPS50Q96JG6 WDR78-207ENST00000488333 613 ntTSL 3 BASIC5.76□□□□□ -1.49
VPS50Q96JG6 TRBV5-2-201ENST00000489095 273 ntBASIC5.76□□□□□ -1.49
VPS50Q96JG6 HMGB1P38-201ENST00000490557 577 ntBASIC5.76□□□□□ -1.49
VPS50Q96JG6 SUMO1P1-201ENST00000497904 306 ntBASIC5.76□□□□□ -1.49
VPS50Q96JG6 AC098862.1-201ENST00000504991 413 ntBASIC5.76□□□□□ -1.49
VPS50Q96JG6 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC5.76□□□□□ -1.49
VPS50Q96JG6 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC5.76□□□□□ -1.49
VPS50Q96JG6 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
VPS50Q96JG6 RNA5SP271-201ENST00000516700 88 ntBASIC5.76□□□□□ -1.49
VPS50Q96JG6 AP004609.2-201ENST00000532177 190 ntBASIC5.76□□□□□ -1.49
VPS50Q96JG6 AC139697.1-201ENST00000548429 745 ntBASIC5.76□□□□□ -1.49
VPS50Q96JG6 AL512310.9-201ENST00000553311 948 ntBASIC5.76□□□□□ -1.49
VPS50Q96JG6 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
VPS50Q96JG6 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC5.76□□□□□ -1.49
VPS50Q96JG6 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.76□□□□□ -1.49
VPS50Q96JG6 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
VPS50Q96JG6 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC5.76□□□□□ -1.49
VPS50Q96JG6 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.76□□□□□ -1.49
VPS50Q96JG6 BMS1P7-201ENST00000602440 1052 ntBASIC5.76□□□□□ -1.49
VPS50Q96JG6 AP004372.1-201ENST00000604842 844 ntBASIC5.76□□□□□ -1.49
VPS50Q96JG6 AC124016.2-201ENST00000610058 665 ntBASIC5.76□□□□□ -1.49
VPS50Q96JG6 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC5.76□□□□□ -1.49
VPS50Q96JG6 AC140725.3-201ENST00000616193 880 ntBASIC5.76□□□□□ -1.49
VPS50Q96JG6 AC078880.5-201ENST00000617845 421 ntBASIC5.76□□□□□ -1.49
VPS50Q96JG6 AL512427.1-201ENST00000618593 349 ntBASIC5.76□□□□□ -1.49
VPS50Q96JG6 AC048344.4-201ENST00000619744 527 ntBASIC5.76□□□□□ -1.49
VPS50Q96JG6 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.76□□□□□ -1.49
VPS50Q96JG6 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.76□□□□□ -1.49
VPS50Q96JG6 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.76□□□□□ -1.49
VPS50Q96JG6 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
VPS50Q96JG6 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.75□□□□□ -1.49
VPS50Q96JG6 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.75□□□□□ -1.49
VPS50Q96JG6 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.75□□□□□ -1.49
VPS50Q96JG6 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
VPS50Q96JG6 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
VPS50Q96JG6 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
VPS50Q96JG6 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
VPS50Q96JG6 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
VPS50Q96JG6 SNORA43.1-201ENST00000364863 140 ntBASIC5.75□□□□□ -1.49
VPS50Q96JG6 AC007618.1-201ENST00000366455 732 ntBASIC5.75□□□□□ -1.49
VPS50Q96JG6 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
VPS50Q96JG6 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
VPS50Q96JG6 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
VPS50Q96JG6 RNU6-481P-201ENST00000384194 107 ntBASIC5.75□□□□□ -1.49
VPS50Q96JG6 RPL10P10-201ENST00000403509 664 ntBASIC5.75□□□□□ -1.49
VPS50Q96JG6 AC096533.1-201ENST00000411645 353 ntBASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms