Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
ERCC4Q92889 MIR133A2-201ENST00000347538 102 ntBASIC6.64□□□□□ -1.35
ERCC4Q92889 SSX3-202ENST00000376893 800 ntTSL 2 BASIC6.64□□□□□ -1.35
ERCC4Q92889 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
ERCC4Q92889 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC6.64□□□□□ -1.35
ERCC4Q92889 RNA5SP198-201ENST00000410376 127 ntBASIC6.64□□□□□ -1.35
ERCC4Q92889 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC6.64□□□□□ -1.35
ERCC4Q92889 CBX1P3-201ENST00000413296 527 ntBASIC6.64□□□□□ -1.35
ERCC4Q92889 RPS7P8-201ENST00000418311 581 ntBASIC6.64□□□□□ -1.35
ERCC4Q92889 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC6.64□□□□□ -1.35
ERCC4Q92889 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.64□□□□□ -1.35
ERCC4Q92889 RPSAP32-201ENST00000432681 526 ntBASIC6.64□□□□□ -1.35
ERCC4Q92889 CR769776.1-201ENST00000441254 787 ntBASIC6.64□□□□□ -1.35
ERCC4Q92889 MTCYBP21-201ENST00000443300 1113 ntBASIC6.64□□□□□ -1.35
ERCC4Q92889 RPL6P30-201ENST00000443382 862 ntBASIC6.64□□□□□ -1.35
ERCC4Q92889 VN1R40P-201ENST00000455196 941 ntBASIC6.64□□□□□ -1.35
ERCC4Q92889 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC6.64□□□□□ -1.35
ERCC4Q92889 AC004129.2-201ENST00000457229 287 ntBASIC6.64□□□□□ -1.35
ERCC4Q92889 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC6.64□□□□□ -1.35
ERCC4Q92889 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC6.64□□□□□ -1.35
ERCC4Q92889 AC134050.1-201ENST00000495088 933 ntBASIC6.64□□□□□ -1.35
ERCC4Q92889 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC6.64□□□□□ -1.35
ERCC4Q92889 OR7E99P-201ENST00000505750 922 ntBASIC6.64□□□□□ -1.35
ERCC4Q92889 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC6.64□□□□□ -1.35
ERCC4Q92889 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC6.64□□□□□ -1.35
ERCC4Q92889 RNA5SP441-201ENST00000516809 88 ntBASIC6.64□□□□□ -1.35
ERCC4Q92889 OR10V3P-201ENST00000525712 725 ntBASIC6.64□□□□□ -1.35
ERCC4Q92889 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC6.64□□□□□ -1.35
ERCC4Q92889 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC6.64□□□□□ -1.35
ERCC4Q92889 NPIPB14P-203ENST00000532298 987 ntBASIC6.64□□□□□ -1.35
ERCC4Q92889 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
ERCC4Q92889 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC6.64□□□□□ -1.35
ERCC4Q92889 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC6.64□□□□□ -1.35
ERCC4Q92889 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC6.64□□□□□ -1.35
ERCC4Q92889 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC6.64□□□□□ -1.35
ERCC4Q92889 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC6.64□□□□□ -1.35
ERCC4Q92889 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC6.64□□□□□ -1.35
ERCC4Q92889 AC009097.3-201ENST00000563557 1018 ntBASIC6.64□□□□□ -1.35
ERCC4Q92889 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.64□□□□□ -1.35
ERCC4Q92889 AC106734.1-201ENST00000568646 663 ntBASIC6.64□□□□□ -1.35
ERCC4Q92889 AC090826.1-203ENST00000569235 490 ntBASIC6.64□□□□□ -1.35
ERCC4Q92889 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.64□□□□□ -1.35
ERCC4Q92889 RN7SL230P-201ENST00000580835 303 ntBASIC6.64□□□□□ -1.35
ERCC4Q92889 MIR4701-201ENST00000583094 63 ntBASIC6.64□□□□□ -1.35
ERCC4Q92889 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.64□□□□□ -1.35
ERCC4Q92889 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC6.64□□□□□ -1.35
ERCC4Q92889 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC6.64□□□□□ -1.35
ERCC4Q92889 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.64□□□□□ -1.35
ERCC4Q92889 AC005021.1-201ENST00000608730 355 ntBASIC6.64□□□□□ -1.35
ERCC4Q92889 AL021918.2-201ENST00000613415 194 ntBASIC6.64□□□□□ -1.35
ERCC4Q92889 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC6.64□□□□□ -1.35
ERCC4Q92889 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
ERCC4Q92889 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC6.64□□□□□ -1.35
ERCC4Q92889 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.64□□□□□ -1.35
ERCC4Q92889 AC010325.3-201ENST00000641084 394 ntBASIC6.64□□□□□ -1.35
ERCC4Q92889 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
ERCC4Q92889 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
ERCC4Q92889 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
ERCC4Q92889 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
ERCC4Q92889 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
ERCC4Q92889 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
ERCC4Q92889 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
ERCC4Q92889 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
ERCC4Q92889 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
ERCC4Q92889 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.64□□□□□ -1.35
ERCC4Q92889 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC6.63□□□□□ -1.35
ERCC4Q92889 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.63□□□□□ -1.35
ERCC4Q92889 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
ERCC4Q92889 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.63□□□□□ -1.35
ERCC4Q92889 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
ERCC4Q92889 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
ERCC4Q92889 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
ERCC4Q92889 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
ERCC4Q92889 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
ERCC4Q92889 RNA5SP453-201ENST00000362503 119 ntBASIC6.63□□□□□ -1.35
ERCC4Q92889 RNU6-1251P-201ENST00000364502 107 ntBASIC6.63□□□□□ -1.35
ERCC4Q92889 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC6.63□□□□□ -1.35
ERCC4Q92889 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.63□□□□□ -1.35
ERCC4Q92889 AL139805.1-201ENST00000407837 289 ntBASIC6.63□□□□□ -1.35
ERCC4Q92889 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC6.63□□□□□ -1.35
ERCC4Q92889 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC6.63□□□□□ -1.35
ERCC4Q92889 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC6.63□□□□□ -1.35
ERCC4Q92889 OSTCP5-201ENST00000425293 453 ntBASIC6.63□□□□□ -1.35
ERCC4Q92889 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
ERCC4Q92889 GAPDHP59-201ENST00000435908 267 ntBASIC6.63□□□□□ -1.35
ERCC4Q92889 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
ERCC4Q92889 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC6.63□□□□□ -1.35
ERCC4Q92889 RPS7P3-201ENST00000443360 580 ntBASIC6.63□□□□□ -1.35
ERCC4Q92889 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.63□□□□□ -1.35
ERCC4Q92889 AC004022.1-201ENST00000447766 1066 ntBASIC6.63□□□□□ -1.35
ERCC4Q92889 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC6.63□□□□□ -1.35
ERCC4Q92889 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC6.63□□□□□ -1.35
ERCC4Q92889 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC6.63□□□□□ -1.35
ERCC4Q92889 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
ERCC4Q92889 RPS27P20-201ENST00000492051 246 ntBASIC6.63□□□□□ -1.35
ERCC4Q92889 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC6.63□□□□□ -1.35
ERCC4Q92889 SUMO1P1-201ENST00000497904 306 ntBASIC6.63□□□□□ -1.35
ERCC4Q92889 RN7SL284P-201ENST00000498823 275 ntBASIC6.63□□□□□ -1.35
ERCC4Q92889 AC008629.2-201ENST00000503783 483 ntBASIC6.63□□□□□ -1.35
ERCC4Q92889 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms