Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC6.26□□□□□ -1.41
SNED1Q8TER0 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC6.26□□□□□ -1.41
SNED1Q8TER0 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC6.26□□□□□ -1.41
SNED1Q8TER0 MORF4L1P3-201ENST00000525966 950 ntBASIC6.26□□□□□ -1.41
SNED1Q8TER0 RGS5-219ENST00000528019 512 ntTSL 4 BASIC6.26□□□□□ -1.41
SNED1Q8TER0 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC6.26□□□□□ -1.41
SNED1Q8TER0 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC6.26□□□□□ -1.41
SNED1Q8TER0 OR7A8P-201ENST00000595427 913 ntBASIC6.26□□□□□ -1.41
SNED1Q8TER0 AL139124.1-201ENST00000609123 421 ntBASIC6.26□□□□□ -1.41
SNED1Q8TER0 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
SNED1Q8TER0 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.26□□□□□ -1.41
SNED1Q8TER0 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
SNED1Q8TER0 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
SNED1Q8TER0 AC015799.1-201ENST00000622996 3122 ntBASIC6.26□□□□□ -1.41
SNED1Q8TER0 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.26□□□□□ -1.41
SNED1Q8TER0 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.26□□□□□ -1.41
SNED1Q8TER0 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SNED1Q8TER0 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.26□□□□□ -1.41
SNED1Q8TER0 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.26□□□□□ -1.41
SNED1Q8TER0 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
SNED1Q8TER0 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
SNED1Q8TER0 SNORA66-201ENST00000384792 133 ntBASIC6.25□□□□□ -1.41
SNED1Q8TER0 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
SNED1Q8TER0 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC6.25□□□□□ -1.41
SNED1Q8TER0 NDUFB4P8-201ENST00000435351 367 ntBASIC6.25□□□□□ -1.41
SNED1Q8TER0 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC6.25□□□□□ -1.41
SNED1Q8TER0 MED28P3-201ENST00000444288 531 ntBASIC6.25□□□□□ -1.41
SNED1Q8TER0 TAAR4P-201ENST00000454843 1039 ntBASIC6.25□□□□□ -1.41
SNED1Q8TER0 AC103987.1-201ENST00000473394 348 ntBASIC6.25□□□□□ -1.41
SNED1Q8TER0 HMGB3P14-201ENST00000494195 599 ntBASIC6.25□□□□□ -1.41
SNED1Q8TER0 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC6.25□□□□□ -1.41
SNED1Q8TER0 OR8Q1P-201ENST00000526467 655 ntBASIC6.25□□□□□ -1.41
SNED1Q8TER0 AC074050.1-201ENST00000563247 211 ntBASIC6.25□□□□□ -1.41
SNED1Q8TER0 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC6.25□□□□□ -1.41
SNED1Q8TER0 AP001542.1-201ENST00000591314 200 ntBASIC6.25□□□□□ -1.41
SNED1Q8TER0 AC019193.2-201ENST00000610012 634 ntBASIC6.25□□□□□ -1.41
SNED1Q8TER0 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC6.25□□□□□ -1.41
SNED1Q8TER0 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
SNED1Q8TER0 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC6.25□□□□□ -1.41
SNED1Q8TER0 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC6.25□□□□□ -1.41
SNED1Q8TER0 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
SNED1Q8TER0 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
SNED1Q8TER0 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
SNED1Q8TER0 AL449283.1-201ENST00000602631 3403 ntBASIC6.25□□□□□ -1.41
SNED1Q8TER0 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.25□□□□□ -1.41
SNED1Q8TER0 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SNED1Q8TER0 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
SNED1Q8TER0 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
SNED1Q8TER0 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC6.25□□□□□ -1.41
SNED1Q8TER0 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SNED1Q8TER0 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
SNED1Q8TER0 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SNED1Q8TER0 MAX-203ENST00000341653 330 ntTSL 2 BASIC6.25□□□□□ -1.41
SNED1Q8TER0 RPL32P3-201ENST00000359025 275 ntBASIC6.25□□□□□ -1.41
SNED1Q8TER0 RN7SKP145-201ENST00000363291 303 ntBASIC6.25□□□□□ -1.41
SNED1Q8TER0 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC6.25□□□□□ -1.41
SNED1Q8TER0 RSL24D1P6-201ENST00000426934 401 ntBASIC6.25□□□□□ -1.41
SNED1Q8TER0 REG1CP-206ENST00000447469 496 ntBASIC6.25□□□□□ -1.41
SNED1Q8TER0 AL356981.1-201ENST00000454879 684 ntBASIC6.25□□□□□ -1.41
SNED1Q8TER0 IGBP1P5-201ENST00000507524 1000 ntBASIC6.25□□□□□ -1.41
SNED1Q8TER0 AC025857.2-201ENST00000602711 238 ntBASIC6.25□□□□□ -1.41
SNED1Q8TER0 AC093388.1-201ENST00000609166 430 ntBASIC6.25□□□□□ -1.41
SNED1Q8TER0 PCA3_2.1-201ENST00000612507 409 ntBASIC6.25□□□□□ -1.41
SNED1Q8TER0 AC016717.3-201ENST00000624730 554 ntBASIC6.25□□□□□ -1.41
SNED1Q8TER0 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SNED1Q8TER0 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
SNED1Q8TER0 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.24□□□□□ -1.41
SNED1Q8TER0 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
SNED1Q8TER0 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SNED1Q8TER0 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.24□□□□□ -1.41
SNED1Q8TER0 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
SNED1Q8TER0 AC006210.2-201ENST00000367074 1545 ntBASIC6.24□□□□□ -1.41
SNED1Q8TER0 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
SNED1Q8TER0 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
SNED1Q8TER0 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SNED1Q8TER0 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
SNED1Q8TER0 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SNED1Q8TER0 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SNED1Q8TER0 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
SNED1Q8TER0 AL691447.1-201ENST00000419456 387 ntBASIC6.24□□□□□ -1.41
SNED1Q8TER0 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC6.24□□□□□ -1.41
SNED1Q8TER0 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
SNED1Q8TER0 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SNED1Q8TER0 AC068587.1-201ENST00000483613 781 ntBASIC6.24□□□□□ -1.41
SNED1Q8TER0 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC6.24□□□□□ -1.41
SNED1Q8TER0 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC6.24□□□□□ -1.41
SNED1Q8TER0 AC130364.2-201ENST00000528639 604 ntBASIC6.24□□□□□ -1.41
SNED1Q8TER0 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SNED1Q8TER0 AL034374.2-201ENST00000605281 548 ntBASIC6.24□□□□□ -1.41
SNED1Q8TER0 AC010632.3-201ENST00000611377 369 ntBASIC6.24□□□□□ -1.41
SNED1Q8TER0 MIR6133-201ENST00000617057 108 ntBASIC6.24□□□□□ -1.41
SNED1Q8TER0 AC091932.2-201ENST00000623014 291 ntBASIC6.24□□□□□ -1.41
SNED1Q8TER0 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
SNED1Q8TER0 AC005618.4-201ENST00000625053 554 ntBASIC6.24□□□□□ -1.41
SNED1Q8TER0 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SNED1Q8TER0 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC6.23□□□□□ -1.41
SNED1Q8TER0 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SNED1Q8TER0 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SNED1Q8TER0 MAPK10-263ENST00000641052 4307 ntBASIC6.23□□□□□ -1.41
SNED1Q8TER0 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms