Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 AC118658.2-201ENST00000618697 459 ntBASIC5.38□□□□□ -1.55
CDKL3Q8IVW4 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.38□□□□□ -1.55
CDKL3Q8IVW4 AC015660.5-201ENST00000623238 564 ntBASIC5.38□□□□□ -1.55
CDKL3Q8IVW4 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.38□□□□□ -1.55
CDKL3Q8IVW4 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CDKL3Q8IVW4 ADAM5-202ENST00000399789 1942 ntBASIC5.38□□□□□ -1.55
CDKL3Q8IVW4 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.38□□□□□ -1.55
CDKL3Q8IVW4 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.38□□□□□ -1.55
CDKL3Q8IVW4 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CDKL3Q8IVW4 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
CDKL3Q8IVW4 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CDKL3Q8IVW4 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.37□□□□□ -1.55
CDKL3Q8IVW4 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.37□□□□□ -1.55
CDKL3Q8IVW4 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
CDKL3Q8IVW4 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.37□□□□□ -1.55
CDKL3Q8IVW4 AC092747.4-201ENST00000620519 1861 ntBASIC5.37□□□□□ -1.55
CDKL3Q8IVW4 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CDKL3Q8IVW4 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CDKL3Q8IVW4 RN7SKP269-201ENST00000365545 319 ntBASIC5.37□□□□□ -1.55
CDKL3Q8IVW4 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CDKL3Q8IVW4 AL050305.1-201ENST00000399993 1230 ntBASIC5.37□□□□□ -1.55
CDKL3Q8IVW4 AC234781.4-201ENST00000419384 244 ntBASIC5.37□□□□□ -1.55
CDKL3Q8IVW4 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.37□□□□□ -1.55
CDKL3Q8IVW4 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.37□□□□□ -1.55
CDKL3Q8IVW4 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.37□□□□□ -1.55
CDKL3Q8IVW4 FAM96AP1-201ENST00000430879 482 ntBASIC5.37□□□□□ -1.55
CDKL3Q8IVW4 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.37□□□□□ -1.55
CDKL3Q8IVW4 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.37□□□□□ -1.55
CDKL3Q8IVW4 CYCSP12-201ENST00000437729 300 ntBASIC5.37□□□□□ -1.55
CDKL3Q8IVW4 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.37□□□□□ -1.55
CDKL3Q8IVW4 CYCSP24-201ENST00000445119 316 ntBASIC5.37□□□□□ -1.55
CDKL3Q8IVW4 AC108161.1-201ENST00000461060 402 ntBASIC5.37□□□□□ -1.55
CDKL3Q8IVW4 RN7SL273P-201ENST00000481561 299 ntBASIC5.37□□□□□ -1.55
CDKL3Q8IVW4 RN7SL547P-201ENST00000490793 290 ntBASIC5.37□□□□□ -1.55
CDKL3Q8IVW4 RNA5SP373-201ENST00000517271 95 ntBASIC5.37□□□□□ -1.55
CDKL3Q8IVW4 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.37□□□□□ -1.55
CDKL3Q8IVW4 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.37□□□□□ -1.55
CDKL3Q8IVW4 AC103703.1-201ENST00000634783 663 ntBASIC5.37□□□□□ -1.55
CDKL3Q8IVW4 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CDKL3Q8IVW4 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
CDKL3Q8IVW4 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CDKL3Q8IVW4 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CDKL3Q8IVW4 OR55B1P-203ENST00000641518 2602 ntBASIC5.37□□□□□ -1.55
CDKL3Q8IVW4 TTC39DP-201ENST00000416781 1688 ntBASIC5.37□□□□□ -1.55
CDKL3Q8IVW4 AL603750.1-201ENST00000624216 1717 ntBASIC5.37□□□□□ -1.55
CDKL3Q8IVW4 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.37□□□□□ -1.55
CDKL3Q8IVW4 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.36□□□□□ -1.55
CDKL3Q8IVW4 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
CDKL3Q8IVW4 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.36□□□□□ -1.55
CDKL3Q8IVW4 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CDKL3Q8IVW4 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CDKL3Q8IVW4 AC027279.1-201ENST00000568885 4284 ntBASIC5.36□□□□□ -1.55
CDKL3Q8IVW4 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
CDKL3Q8IVW4 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CDKL3Q8IVW4 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CDKL3Q8IVW4 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CDKL3Q8IVW4 SNORA17A-201ENST00000391185 133 ntBASIC5.36□□□□□ -1.55
CDKL3Q8IVW4 AL390774.1-201ENST00000411924 246 ntBASIC5.36□□□□□ -1.55
CDKL3Q8IVW4 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.36□□□□□ -1.55
CDKL3Q8IVW4 AL389925.1-201ENST00000432257 728 ntBASIC5.36□□□□□ -1.55
CDKL3Q8IVW4 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.36□□□□□ -1.55
CDKL3Q8IVW4 TCEA1P3-201ENST00000443005 880 ntBASIC5.36□□□□□ -1.55
CDKL3Q8IVW4 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.36□□□□□ -1.55
CDKL3Q8IVW4 OR11I1P-201ENST00000486033 954 ntBASIC5.36□□□□□ -1.55
CDKL3Q8IVW4 COX6B1P2-201ENST00000489624 230 ntBASIC5.36□□□□□ -1.55
CDKL3Q8IVW4 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.36□□□□□ -1.55
CDKL3Q8IVW4 NIFKP7-201ENST00000503365 834 ntBASIC5.36□□□□□ -1.55
CDKL3Q8IVW4 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.36□□□□□ -1.55
CDKL3Q8IVW4 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.36□□□□□ -1.55
CDKL3Q8IVW4 MTATP6P1-201ENST00000514057 681 ntBASIC5.36□□□□□ -1.55
CDKL3Q8IVW4 RNU6-941P-201ENST00000516346 108 ntBASIC5.36□□□□□ -1.55
CDKL3Q8IVW4 AC012400.1-201ENST00000518452 381 ntBASIC5.36□□□□□ -1.55
CDKL3Q8IVW4 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.36□□□□□ -1.55
CDKL3Q8IVW4 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.36□□□□□ -1.55
CDKL3Q8IVW4 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.36□□□□□ -1.55
CDKL3Q8IVW4 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.36□□□□□ -1.55
CDKL3Q8IVW4 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.36□□□□□ -1.55
CDKL3Q8IVW4 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.36□□□□□ -1.55
CDKL3Q8IVW4 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC5.36□□□□□ -1.55
CDKL3Q8IVW4 SNORA17.5-201ENST00000630429 132 ntBASIC5.36□□□□□ -1.55
CDKL3Q8IVW4 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CDKL3Q8IVW4 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CDKL3Q8IVW4 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CDKL3Q8IVW4 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CDKL3Q8IVW4 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CDKL3Q8IVW4 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.36□□□□□ -1.55
CDKL3Q8IVW4 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.36□□□□□ -1.55
CDKL3Q8IVW4 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.36□□□□□ -1.55
CDKL3Q8IVW4 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CDKL3Q8IVW4 AC083843.2-201ENST00000568248 6253 ntBASIC5.35□□□□□ -1.55
CDKL3Q8IVW4 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
CDKL3Q8IVW4 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CDKL3Q8IVW4 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CDKL3Q8IVW4 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.35□□□□□ -1.55
CDKL3Q8IVW4 HSPA8P14-201ENST00000552265 1805 ntBASIC5.35□□□□□ -1.55
CDKL3Q8IVW4 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CDKL3Q8IVW4 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CDKL3Q8IVW4 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.35□□□□□ -1.55
CDKL3Q8IVW4 RNA5SP90-201ENST00000364801 99 ntBASIC5.35□□□□□ -1.55
CDKL3Q8IVW4 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 148.6 ms