Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 AL133173.1-201ENST00000423458 397 ntBASIC5.09□□□□□ -1.59
CCDC71Q8IV32 RIMKLBP2-201ENST00000424737 654 ntBASIC5.09□□□□□ -1.59
CCDC71Q8IV32 AC113412.1-201ENST00000425840 504 ntBASIC5.09□□□□□ -1.59
CCDC71Q8IV32 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.09□□□□□ -1.59
CCDC71Q8IV32 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.09□□□□□ -1.59
CCDC71Q8IV32 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.09□□□□□ -1.59
CCDC71Q8IV32 PTMAP6-201ENST00000439110 327 ntBASIC5.09□□□□□ -1.59
CCDC71Q8IV32 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.09□□□□□ -1.59
CCDC71Q8IV32 AL596266.1-201ENST00000448132 400 ntBASIC5.09□□□□□ -1.59
CCDC71Q8IV32 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.09□□□□□ -1.59
CCDC71Q8IV32 OR52E3P-201ENST00000452083 936 ntBASIC5.09□□□□□ -1.59
CCDC71Q8IV32 SBDSP1-204ENST00000453858 737 ntBASIC5.09□□□□□ -1.59
CCDC71Q8IV32 AC011225.1-201ENST00000457751 369 ntBASIC5.09□□□□□ -1.59
CCDC71Q8IV32 OR52A4P-203ENST00000498233 1014 ntBASIC5.09□□□□□ -1.59
CCDC71Q8IV32 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.09□□□□□ -1.59
CCDC71Q8IV32 AC147055.1-201ENST00000509261 750 ntBASIC5.09□□□□□ -1.59
CCDC71Q8IV32 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.09□□□□□ -1.59
CCDC71Q8IV32 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.09□□□□□ -1.59
CCDC71Q8IV32 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.09□□□□□ -1.59
CCDC71Q8IV32 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.09□□□□□ -1.59
CCDC71Q8IV32 HNRNPRP2-201ENST00000528421 743 ntBASIC5.09□□□□□ -1.59
CCDC71Q8IV32 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.09□□□□□ -1.59
CCDC71Q8IV32 AC027369.5-201ENST00000533838 755 ntBASIC5.09□□□□□ -1.59
CCDC71Q8IV32 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.09□□□□□ -1.59
CCDC71Q8IV32 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.09□□□□□ -1.59
CCDC71Q8IV32 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.09□□□□□ -1.59
CCDC71Q8IV32 AC015720.2-201ENST00000567709 334 ntBASIC5.09□□□□□ -1.59
CCDC71Q8IV32 AP000919.1-201ENST00000582850 985 ntBASIC5.09□□□□□ -1.59
CCDC71Q8IV32 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.09□□□□□ -1.59
CCDC71Q8IV32 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.09□□□□□ -1.59
CCDC71Q8IV32 AC063977.5-201ENST00000601044 974 ntBASIC5.09□□□□□ -1.59
CCDC71Q8IV32 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC5.09□□□□□ -1.59
CCDC71Q8IV32 IMMP1LP3-201ENST00000604197 224 ntBASIC5.09□□□□□ -1.59
CCDC71Q8IV32 AC138473.1-201ENST00000605717 526 ntBASIC5.09□□□□□ -1.59
CCDC71Q8IV32 AC020658.4-201ENST00000613987 684 ntBASIC5.09□□□□□ -1.59
CCDC71Q8IV32 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.09□□□□□ -1.59
CCDC71Q8IV32 MIR6730-201ENST00000622213 67 ntBASIC5.09□□□□□ -1.59
CCDC71Q8IV32 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.09□□□□□ -1.59
CCDC71Q8IV32 PWAR1-201ENST00000624188 2414 ntBASIC5.09□□□□□ -1.59
CCDC71Q8IV32 AL034549.2-201ENST00000618285 3373 ntBASIC5.09□□□□□ -1.59
CCDC71Q8IV32 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC71Q8IV32 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC71Q8IV32 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.09□□□□□ -1.6
CCDC71Q8IV32 AC003973.3-201ENST00000624863 2822 ntBASIC5.09□□□□□ -1.6
CCDC71Q8IV32 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.09□□□□□ -1.6
CCDC71Q8IV32 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.09□□□□□ -1.6
CCDC71Q8IV32 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.08□□□□□ -1.6
CCDC71Q8IV32 AL590763.1-201ENST00000398297 1545 ntBASIC5.08□□□□□ -1.6
CCDC71Q8IV32 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.08□□□□□ -1.6
CCDC71Q8IV32 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC71Q8IV32 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC71Q8IV32 CASC19-255ENST00000641733 1385 ntBASIC5.08□□□□□ -1.6
CCDC71Q8IV32 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC71Q8IV32 SNORA70-201ENST00000384436 135 ntBASIC5.08□□□□□ -1.6
CCDC71Q8IV32 MIR1286-201ENST00000408112 78 ntBASIC5.08□□□□□ -1.6
CCDC71Q8IV32 SETP15-201ENST00000412724 337 ntBASIC5.08□□□□□ -1.6
CCDC71Q8IV32 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC71Q8IV32 HMGB1P32-201ENST00000425971 565 ntBASIC5.08□□□□□ -1.6
CCDC71Q8IV32 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC71Q8IV32 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC71Q8IV32 RPL7P56-201ENST00000429441 717 ntBASIC5.08□□□□□ -1.6
CCDC71Q8IV32 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.08□□□□□ -1.6
CCDC71Q8IV32 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.08□□□□□ -1.6
CCDC71Q8IV32 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC71Q8IV32 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC71Q8IV32 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC71Q8IV32 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC71Q8IV32 AP000547.1-201ENST00000454360 617 ntBASIC5.08□□□□□ -1.6
CCDC71Q8IV32 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC71Q8IV32 RN7SL188P-201ENST00000469842 285 ntBASIC5.08□□□□□ -1.6
CCDC71Q8IV32 COPS8P2-201ENST00000473228 627 ntBASIC5.08□□□□□ -1.6
CCDC71Q8IV32 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.08□□□□□ -1.6
CCDC71Q8IV32 RPS4XP1-201ENST00000482189 787 ntBASIC5.08□□□□□ -1.6
CCDC71Q8IV32 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.08□□□□□ -1.6
CCDC71Q8IV32 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC71Q8IV32 ENPP7P11-201ENST00000505915 627 ntBASIC5.08□□□□□ -1.6
CCDC71Q8IV32 AC016559.2-201ENST00000510759 359 ntBASIC5.08□□□□□ -1.6
CCDC71Q8IV32 AC074255.1-201ENST00000511259 501 ntBASIC5.08□□□□□ -1.6
CCDC71Q8IV32 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.08□□□□□ -1.6
CCDC71Q8IV32 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC71Q8IV32 OR10G5P-201ENST00000532733 358 ntBASIC5.08□□□□□ -1.6
CCDC71Q8IV32 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC71Q8IV32 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.08□□□□□ -1.6
CCDC71Q8IV32 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.08□□□□□ -1.6
CCDC71Q8IV32 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC71Q8IV32 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC71Q8IV32 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC71Q8IV32 AC106730.2-201ENST00000566641 540 ntBASIC5.08□□□□□ -1.6
CCDC71Q8IV32 MRPS21P7-201ENST00000566937 238 ntBASIC5.08□□□□□ -1.6
CCDC71Q8IV32 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.08□□□□□ -1.6
CCDC71Q8IV32 MTCYBP13-201ENST00000578634 1093 ntBASIC5.08□□□□□ -1.6
CCDC71Q8IV32 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC71Q8IV32 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.08□□□□□ -1.6
CCDC71Q8IV32 BNIP3P32-201ENST00000600015 554 ntBASIC5.08□□□□□ -1.6
CCDC71Q8IV32 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.08□□□□□ -1.6
CCDC71Q8IV32 SUGT1P3-202ENST00000604259 383 ntBASIC5.08□□□□□ -1.6
CCDC71Q8IV32 AC010245.2-201ENST00000606908 1167 ntBASIC5.08□□□□□ -1.6
CCDC71Q8IV32 AC004948.1-201ENST00000609858 672 ntBASIC5.08□□□□□ -1.6
CCDC71Q8IV32 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC71Q8IV32 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms