Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
PTCHD4Q6ZW05 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
PTCHD4Q6ZW05 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
PTCHD4Q6ZW05 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
PTCHD4Q6ZW05 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.47□□□□□ -1.53
PTCHD4Q6ZW05 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PTCHD4Q6ZW05 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.47□□□□□ -1.53
PTCHD4Q6ZW05 EIF3EP1-201ENST00000433978 1316 ntBASIC5.47□□□□□ -1.53
PTCHD4Q6ZW05 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PTCHD4Q6ZW05 AL132640.2-201ENST00000559968 1698 ntBASIC5.47□□□□□ -1.53
PTCHD4Q6ZW05 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
PTCHD4Q6ZW05 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PTCHD4Q6ZW05 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
PTCHD4Q6ZW05 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.53
PTCHD4Q6ZW05 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
PTCHD4Q6ZW05 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
PTCHD4Q6ZW05 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
PTCHD4Q6ZW05 NEPNP-201ENST00000404786 1371 ntBASIC5.46□□□□□ -1.54
PTCHD4Q6ZW05 PPBPP2-201ENST00000513150 1362 ntBASIC5.46□□□□□ -1.54
PTCHD4Q6ZW05 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
PTCHD4Q6ZW05 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
PTCHD4Q6ZW05 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
PTCHD4Q6ZW05 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
PTCHD4Q6ZW05 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
PTCHD4Q6ZW05 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
PTCHD4Q6ZW05 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
PTCHD4Q6ZW05 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
PTCHD4Q6ZW05 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
PTCHD4Q6ZW05 MIR513B-201ENST00000385136 84 ntBASIC5.46□□□□□ -1.54
PTCHD4Q6ZW05 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC5.46□□□□□ -1.54
PTCHD4Q6ZW05 UBE2V1P11-201ENST00000411559 285 ntBASIC5.46□□□□□ -1.54
PTCHD4Q6ZW05 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC5.46□□□□□ -1.54
PTCHD4Q6ZW05 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC5.46□□□□□ -1.54
PTCHD4Q6ZW05 RPL22P18-201ENST00000417197 377 ntBASIC5.46□□□□□ -1.54
PTCHD4Q6ZW05 KRR1P1-201ENST00000419430 803 ntBASIC5.46□□□□□ -1.54
PTCHD4Q6ZW05 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
PTCHD4Q6ZW05 OR2X1P-201ENST00000421144 687 ntBASIC5.46□□□□□ -1.54
PTCHD4Q6ZW05 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC5.46□□□□□ -1.54
PTCHD4Q6ZW05 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.46□□□□□ -1.54
PTCHD4Q6ZW05 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.46□□□□□ -1.54
PTCHD4Q6ZW05 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC5.46□□□□□ -1.54
PTCHD4Q6ZW05 BX276092.6-201ENST00000430476 250 ntBASIC5.46□□□□□ -1.54
PTCHD4Q6ZW05 RPEP4-201ENST00000437636 602 ntBASIC5.46□□□□□ -1.54
PTCHD4Q6ZW05 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC5.46□□□□□ -1.54
PTCHD4Q6ZW05 AL512593.1-201ENST00000444758 779 ntBASIC5.46□□□□□ -1.54
PTCHD4Q6ZW05 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC5.46□□□□□ -1.54
PTCHD4Q6ZW05 BX276092.8-201ENST00000455722 250 ntBASIC5.46□□□□□ -1.54
PTCHD4Q6ZW05 RBMY2HP-201ENST00000457961 720 ntBASIC5.46□□□□□ -1.54
PTCHD4Q6ZW05 RN7SL836P-201ENST00000476140 296 ntBASIC5.46□□□□□ -1.54
PTCHD4Q6ZW05 AC087672.1-201ENST00000479876 766 ntBASIC5.46□□□□□ -1.54
PTCHD4Q6ZW05 RPL34P33-201ENST00000486062 334 ntBASIC5.46□□□□□ -1.54
PTCHD4Q6ZW05 AC107398.1-201ENST00000486904 505 ntBASIC5.46□□□□□ -1.54
PTCHD4Q6ZW05 PDCL3P4-201ENST00000489621 720 ntBASIC5.46□□□□□ -1.54
PTCHD4Q6ZW05 AC026414.1-201ENST00000504046 698 ntBASIC5.46□□□□□ -1.54
PTCHD4Q6ZW05 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC5.46□□□□□ -1.54
PTCHD4Q6ZW05 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC5.46□□□□□ -1.54
PTCHD4Q6ZW05 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.46□□□□□ -1.54
PTCHD4Q6ZW05 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC5.46□□□□□ -1.54
PTCHD4Q6ZW05 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5.46□□□□□ -1.54
PTCHD4Q6ZW05 RPS27AP18-201ENST00000515536 459 ntBASIC5.46□□□□□ -1.54
PTCHD4Q6ZW05 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.46□□□□□ -1.54
PTCHD4Q6ZW05 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
PTCHD4Q6ZW05 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC5.46□□□□□ -1.54
PTCHD4Q6ZW05 AC078899.1-201ENST00000521432 1185 ntBASIC5.46□□□□□ -1.54
PTCHD4Q6ZW05 AC079064.1-201ENST00000528365 362 ntBASIC5.46□□□□□ -1.54
PTCHD4Q6ZW05 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
PTCHD4Q6ZW05 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC5.46□□□□□ -1.54
PTCHD4Q6ZW05 AC091515.1-201ENST00000548110 679 ntBASIC5.46□□□□□ -1.54
PTCHD4Q6ZW05 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC5.46□□□□□ -1.54
PTCHD4Q6ZW05 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
PTCHD4Q6ZW05 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC5.46□□□□□ -1.54
PTCHD4Q6ZW05 HMGN1P26-201ENST00000558737 303 ntBASIC5.46□□□□□ -1.54
PTCHD4Q6ZW05 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC5.46□□□□□ -1.54
PTCHD4Q6ZW05 AC018552.1-201ENST00000562099 811 ntBASIC5.46□□□□□ -1.54
PTCHD4Q6ZW05 AC009097.3-201ENST00000563557 1018 ntBASIC5.46□□□□□ -1.54
PTCHD4Q6ZW05 AC122134.1-201ENST00000565664 1104 ntBASIC5.46□□□□□ -1.54
PTCHD4Q6ZW05 AC090826.1-203ENST00000569235 490 ntBASIC5.46□□□□□ -1.54
PTCHD4Q6ZW05 MIR3157-201ENST00000578688 85 ntBASIC5.46□□□□□ -1.54
PTCHD4Q6ZW05 SNORD39.2-201ENST00000579995 76 ntBASIC5.46□□□□□ -1.54
PTCHD4Q6ZW05 AC012368.3-201ENST00000604190 219 ntBASIC5.46□□□□□ -1.54
PTCHD4Q6ZW05 AL133481.2-203ENST00000607558 139 ntBASIC5.46□□□□□ -1.54
PTCHD4Q6ZW05 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.46□□□□□ -1.54
PTCHD4Q6ZW05 MIR6811-201ENST00000620409 58 ntBASIC5.46□□□□□ -1.54
PTCHD4Q6ZW05 AL122023.1-201ENST00000622847 530 ntBASIC5.46□□□□□ -1.54
PTCHD4Q6ZW05 AP003485.2-201ENST00000623636 610 ntBASIC5.46□□□□□ -1.54
PTCHD4Q6ZW05 TEX41-279ENST00000629149 609 ntTSL 5 BASIC5.46□□□□□ -1.54
PTCHD4Q6ZW05 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC5.46□□□□□ -1.54
PTCHD4Q6ZW05 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
PTCHD4Q6ZW05 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
PTCHD4Q6ZW05 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
PTCHD4Q6ZW05 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
PTCHD4Q6ZW05 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
PTCHD4Q6ZW05 CIR1P2-201ENST00000514821 1342 ntBASIC5.46□□□□□ -1.54
PTCHD4Q6ZW05 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
PTCHD4Q6ZW05 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.45□□□□□ -1.54
PTCHD4Q6ZW05 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PTCHD4Q6ZW05 AC130304.1-201ENST00000622942 2385 ntBASIC5.45□□□□□ -1.54
PTCHD4Q6ZW05 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PTCHD4Q6ZW05 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.45□□□□□ -1.54
PTCHD4Q6ZW05 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms