Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RFWD3Q6PCD5 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
RFWD3Q6PCD5 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
RFWD3Q6PCD5 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.51□□□□□ -1.53
RFWD3Q6PCD5 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.51□□□□□ -1.53
RFWD3Q6PCD5 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RFWD3Q6PCD5 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
RFWD3Q6PCD5 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
RFWD3Q6PCD5 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RFWD3Q6PCD5 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.5□□□□□ -1.53
RFWD3Q6PCD5 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
RFWD3Q6PCD5 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RFWD3Q6PCD5 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RFWD3Q6PCD5 RPL23P2-201ENST00000320371 421 ntBASIC5.5□□□□□ -1.53
RFWD3Q6PCD5 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
RFWD3Q6PCD5 DUTP5-201ENST00000406790 469 ntBASIC5.5□□□□□ -1.53
RFWD3Q6PCD5 RNU4-34P-201ENST00000410431 124 ntBASIC5.5□□□□□ -1.53
RFWD3Q6PCD5 AC211486.3-201ENST00000412694 621 ntBASIC5.5□□□□□ -1.53
RFWD3Q6PCD5 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.5□□□□□ -1.53
RFWD3Q6PCD5 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.5□□□□□ -1.53
RFWD3Q6PCD5 RPS11P7-201ENST00000442125 465 ntBASIC5.5□□□□□ -1.53
RFWD3Q6PCD5 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.5□□□□□ -1.53
RFWD3Q6PCD5 AC004815.1-201ENST00000484185 331 ntBASIC5.5□□□□□ -1.53
RFWD3Q6PCD5 RN7SL423P-201ENST00000486202 304 ntBASIC5.5□□□□□ -1.53
RFWD3Q6PCD5 AC093763.2-201ENST00000505334 1223 ntBASIC5.5□□□□□ -1.53
RFWD3Q6PCD5 OR5M14P-201ENST00000506803 618 ntBASIC5.5□□□□□ -1.53
RFWD3Q6PCD5 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
RFWD3Q6PCD5 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.5□□□□□ -1.53
RFWD3Q6PCD5 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.5□□□□□ -1.53
RFWD3Q6PCD5 AC125612.1-201ENST00000547580 377 ntBASIC5.5□□□□□ -1.53
RFWD3Q6PCD5 AC051619.2-201ENST00000559063 397 ntBASIC5.5□□□□□ -1.53
RFWD3Q6PCD5 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.5□□□□□ -1.53
RFWD3Q6PCD5 AC009027.1-201ENST00000604510 479 ntBASIC5.5□□□□□ -1.53
RFWD3Q6PCD5 AC244107.2-201ENST00000611773 76 ntBASIC5.5□□□□□ -1.53
RFWD3Q6PCD5 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RFWD3Q6PCD5 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5.5□□□□□ -1.53
RFWD3Q6PCD5 AC073869.7-201ENST00000640874 297 ntBASIC5.5□□□□□ -1.53
RFWD3Q6PCD5 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RFWD3Q6PCD5 AL603750.1-201ENST00000624216 1717 ntBASIC5.5□□□□□ -1.53
RFWD3Q6PCD5 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.5□□□□□ -1.53
RFWD3Q6PCD5 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
RFWD3Q6PCD5 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RFWD3Q6PCD5 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RFWD3Q6PCD5 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RFWD3Q6PCD5 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RFWD3Q6PCD5 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
RFWD3Q6PCD5 SPTLC1P2-201ENST00000407089 121 ntBASIC5.49□□□□□ -1.53
RFWD3Q6PCD5 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RFWD3Q6PCD5 AC093655.2-201ENST00000425735 631 ntBASIC5.49□□□□□ -1.53
RFWD3Q6PCD5 MGAT2P2-201ENST00000427194 797 ntBASIC5.49□□□□□ -1.53
RFWD3Q6PCD5 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.49□□□□□ -1.53
RFWD3Q6PCD5 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.49□□□□□ -1.53
RFWD3Q6PCD5 AL627308.1-201ENST00000435693 821 ntBASIC5.49□□□□□ -1.53
RFWD3Q6PCD5 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.49□□□□□ -1.53
RFWD3Q6PCD5 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.49□□□□□ -1.53
RFWD3Q6PCD5 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.49□□□□□ -1.53
RFWD3Q6PCD5 SEPT14P1-201ENST00000458703 648 ntBASIC5.49□□□□□ -1.53
RFWD3Q6PCD5 AC090589.1-201ENST00000473109 362 ntBASIC5.49□□□□□ -1.53
RFWD3Q6PCD5 ENPP7P11-201ENST00000505915 627 ntBASIC5.49□□□□□ -1.53
RFWD3Q6PCD5 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.49□□□□□ -1.53
RFWD3Q6PCD5 AC092709.1-201ENST00000521355 1045 ntBASIC5.49□□□□□ -1.53
RFWD3Q6PCD5 HAUS8P1-201ENST00000549005 542 ntBASIC5.49□□□□□ -1.53
RFWD3Q6PCD5 RN7SL290P-201ENST00000578661 300 ntBASIC5.49□□□□□ -1.53
RFWD3Q6PCD5 AC108738.1-201ENST00000603703 237 ntBASIC5.49□□□□□ -1.53
RFWD3Q6PCD5 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.49□□□□□ -1.53
RFWD3Q6PCD5 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.49□□□□□ -1.53
RFWD3Q6PCD5 AC018445.2-201ENST00000622987 260 ntBASIC5.49□□□□□ -1.53
RFWD3Q6PCD5 AC087821.1-201ENST00000623639 567 ntBASIC5.49□□□□□ -1.53
RFWD3Q6PCD5 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC5.49□□□□□ -1.53
RFWD3Q6PCD5 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC5.49□□□□□ -1.53
RFWD3Q6PCD5 AC099654.6-201ENST00000636487 512 ntBASIC5.49□□□□□ -1.53
RFWD3Q6PCD5 AC020633.1-201ENST00000468439 2247 ntBASIC5.49□□□□□ -1.53
RFWD3Q6PCD5 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
RFWD3Q6PCD5 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
RFWD3Q6PCD5 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
RFWD3Q6PCD5 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.49□□□□□ -1.53
RFWD3Q6PCD5 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.49□□□□□ -1.53
RFWD3Q6PCD5 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.49□□□□□ -1.53
RFWD3Q6PCD5 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
RFWD3Q6PCD5 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RFWD3Q6PCD5 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.49□□□□□ -1.53
RFWD3Q6PCD5 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
RFWD3Q6PCD5 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
RFWD3Q6PCD5 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RFWD3Q6PCD5 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RFWD3Q6PCD5 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.48□□□□□ -1.53
RFWD3Q6PCD5 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RFWD3Q6PCD5 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
RFWD3Q6PCD5 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.48□□□□□ -1.53
RFWD3Q6PCD5 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RFWD3Q6PCD5 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RFWD3Q6PCD5 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RFWD3Q6PCD5 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.48□□□□□ -1.53
RFWD3Q6PCD5 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
RFWD3Q6PCD5 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
RFWD3Q6PCD5 AL035696.2-201ENST00000407941 709 ntBASIC5.48□□□□□ -1.53
RFWD3Q6PCD5 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.48□□□□□ -1.53
RFWD3Q6PCD5 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.48□□□□□ -1.53
RFWD3Q6PCD5 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.48□□□□□ -1.53
RFWD3Q6PCD5 FTLP19-201ENST00000433300 394 ntBASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms