Protein–RNA interactions for Protein: Q5VWJ9

SNX30, Sorting nexin-30, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30Q5VWJ9 MTCO3P43-201ENST00000440974 771 ntBASIC5.88□□□□□ -1.47
SNX30Q5VWJ9 AC019185.1-201ENST00000442718 389 ntBASIC5.88□□□□□ -1.47
SNX30Q5VWJ9 AL627224.1-201ENST00000448334 444 ntBASIC5.88□□□□□ -1.47
SNX30Q5VWJ9 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.88□□□□□ -1.47
SNX30Q5VWJ9 MEMO1P4-201ENST00000453590 386 ntBASIC5.88□□□□□ -1.47
SNX30Q5VWJ9 RPS26P39-201ENST00000469206 341 ntBASIC5.88□□□□□ -1.47
SNX30Q5VWJ9 EIF1P7-201ENST00000487533 337 ntBASIC5.88□□□□□ -1.47
SNX30Q5VWJ9 RN7SL184P-201ENST00000488308 297 ntBASIC5.88□□□□□ -1.47
SNX30Q5VWJ9 SCARNA21.2-201ENST00000516600 166 ntBASIC5.88□□□□□ -1.47
SNX30Q5VWJ9 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.88□□□□□ -1.47
SNX30Q5VWJ9 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.88□□□□□ -1.47
SNX30Q5VWJ9 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
SNX30Q5VWJ9 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC5.88□□□□□ -1.47
SNX30Q5VWJ9 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.88□□□□□ -1.47
SNX30Q5VWJ9 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.88□□□□□ -1.47
SNX30Q5VWJ9 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SNX30Q5VWJ9 AC007342.5-201ENST00000571340 2142 ntBASIC5.88□□□□□ -1.47
SNX30Q5VWJ9 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.88□□□□□ -1.47
SNX30Q5VWJ9 MTCO2P22-201ENST00000603246 681 ntBASIC5.88□□□□□ -1.47
SNX30Q5VWJ9 AC079395.2-201ENST00000610982 737 ntBASIC5.88□□□□□ -1.47
SNX30Q5VWJ9 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.88□□□□□ -1.47
SNX30Q5VWJ9 AL512624.1-201ENST00000613638 469 ntBASIC5.88□□□□□ -1.47
SNX30Q5VWJ9 AC007204.2-201ENST00000615022 616 ntBASIC5.88□□□□□ -1.47
SNX30Q5VWJ9 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5.88□□□□□ -1.47
SNX30Q5VWJ9 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SNX30Q5VWJ9 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SNX30Q5VWJ9 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.88□□□□□ -1.47
SNX30Q5VWJ9 MTND4P21-201ENST00000453886 1357 ntBASIC5.88□□□□□ -1.47
SNX30Q5VWJ9 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SNX30Q5VWJ9 CASC19-248ENST00000641674 1356 ntBASIC5.88□□□□□ -1.47
SNX30Q5VWJ9 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.88□□□□□ -1.47
SNX30Q5VWJ9 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
SNX30Q5VWJ9 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
SNX30Q5VWJ9 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.88□□□□□ -1.47
SNX30Q5VWJ9 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.88□□□□□ -1.47
SNX30Q5VWJ9 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SNX30Q5VWJ9 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
SNX30Q5VWJ9 AP001029.2-203ENST00000589795 4910 ntBASIC5.88□□□□□ -1.47
SNX30Q5VWJ9 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SNX30Q5VWJ9 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.88□□□□□ -1.47
SNX30Q5VWJ9 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.88□□□□□ -1.47
SNX30Q5VWJ9 CR788268.1-201ENST00000603931 1809 ntBASIC5.88□□□□□ -1.47
SNX30Q5VWJ9 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SNX30Q5VWJ9 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
SNX30Q5VWJ9 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.87□□□□□ -1.47
SNX30Q5VWJ9 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
SNX30Q5VWJ9 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SNX30Q5VWJ9 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.87□□□□□ -1.47
SNX30Q5VWJ9 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
SNX30Q5VWJ9 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SNX30Q5VWJ9 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
SNX30Q5VWJ9 GAPDHP24-201ENST00000328713 983 ntBASIC5.87□□□□□ -1.47
SNX30Q5VWJ9 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
SNX30Q5VWJ9 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.87□□□□□ -1.47
SNX30Q5VWJ9 RPS6P23-201ENST00000413224 722 ntBASIC5.87□□□□□ -1.47
SNX30Q5VWJ9 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SNX30Q5VWJ9 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.87□□□□□ -1.47
SNX30Q5VWJ9 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC5.87□□□□□ -1.47
SNX30Q5VWJ9 AL596266.1-201ENST00000448132 400 ntBASIC5.87□□□□□ -1.47
SNX30Q5VWJ9 VDAC2P4-201ENST00000452925 711 ntBASIC5.87□□□□□ -1.47
SNX30Q5VWJ9 AC107015.1-201ENST00000466902 747 ntBASIC5.87□□□□□ -1.47
SNX30Q5VWJ9 RPL35AP19-201ENST00000469425 329 ntBASIC5.87□□□□□ -1.47
SNX30Q5VWJ9 RN7SL583P-201ENST00000475692 287 ntBASIC5.87□□□□□ -1.47
SNX30Q5VWJ9 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC5.87□□□□□ -1.47
SNX30Q5VWJ9 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
SNX30Q5VWJ9 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SNX30Q5VWJ9 LINC00557-201ENST00000563184 1279 ntBASIC5.87□□□□□ -1.47
SNX30Q5VWJ9 DHFRP1-201ENST00000579682 559 ntBASIC5.87□□□□□ -1.47
SNX30Q5VWJ9 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.87□□□□□ -1.47
SNX30Q5VWJ9 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC5.87□□□□□ -1.47
SNX30Q5VWJ9 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.87□□□□□ -1.47
SNX30Q5VWJ9 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.87□□□□□ -1.47
SNX30Q5VWJ9 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.87□□□□□ -1.47
SNX30Q5VWJ9 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SNX30Q5VWJ9 AC025574.2-201ENST00000615621 514 ntBASIC5.87□□□□□ -1.47
SNX30Q5VWJ9 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
SNX30Q5VWJ9 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
SNX30Q5VWJ9 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
SNX30Q5VWJ9 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.87□□□□□ -1.47
SNX30Q5VWJ9 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.87□□□□□ -1.47
SNX30Q5VWJ9 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SNX30Q5VWJ9 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.87□□□□□ -1.47
SNX30Q5VWJ9 AL158152.1-201ENST00000602652 1435 ntBASIC5.87□□□□□ -1.47
SNX30Q5VWJ9 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
SNX30Q5VWJ9 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.87□□□□□ -1.47
SNX30Q5VWJ9 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.87□□□□□ -1.47
SNX30Q5VWJ9 AC093849.1-201ENST00000563631 2209 ntBASIC5.87□□□□□ -1.47
SNX30Q5VWJ9 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SNX30Q5VWJ9 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.87□□□□□ -1.47
SNX30Q5VWJ9 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SNX30Q5VWJ9 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
SNX30Q5VWJ9 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SNX30Q5VWJ9 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
SNX30Q5VWJ9 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SNX30Q5VWJ9 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SNX30Q5VWJ9 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
SNX30Q5VWJ9 RLIMP2-201ENST00000427891 1563 ntBASIC5.86□□□□□ -1.47
SNX30Q5VWJ9 AC017002.4-201ENST00000604721 1525 ntBASIC5.86□□□□□ -1.47
SNX30Q5VWJ9 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
SNX30Q5VWJ9 RNA5SP234-201ENST00000363916 119 ntBASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms