Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.53□□□□□ -1.68
LRRK2Q5S007 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LRRK2Q5S007 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
LRRK2Q5S007 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
LRRK2Q5S007 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
LRRK2Q5S007 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
LRRK2Q5S007 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
LRRK2Q5S007 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LRRK2Q5S007 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
LRRK2Q5S007 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC4.53□□□□□ -1.68
LRRK2Q5S007 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
LRRK2Q5S007 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
LRRK2Q5S007 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
LRRK2Q5S007 RPL6P5-201ENST00000445678 828 ntBASIC4.53□□□□□ -1.68
LRRK2Q5S007 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.53□□□□□ -1.68
LRRK2Q5S007 SNORA59A-201ENST00000459326 152 ntBASIC4.53□□□□□ -1.68
LRRK2Q5S007 AC068522.1-201ENST00000482895 345 ntBASIC4.53□□□□□ -1.68
LRRK2Q5S007 ATP5LP5-201ENST00000483050 299 ntBASIC4.53□□□□□ -1.68
LRRK2Q5S007 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.53□□□□□ -1.68
LRRK2Q5S007 AP005403.1-201ENST00000579720 229 ntBASIC4.53□□□□□ -1.68
LRRK2Q5S007 AC024220.1-201ENST00000603675 484 ntBASIC4.53□□□□□ -1.68
LRRK2Q5S007 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC4.53□□□□□ -1.68
LRRK2Q5S007 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
LRRK2Q5S007 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LRRK2Q5S007 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LRRK2Q5S007 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LRRK2Q5S007 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
LRRK2Q5S007 NCOA4P3-201ENST00000513203 1877 ntBASIC4.53□□□□□ -1.68
LRRK2Q5S007 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC4.53□□□□□ -1.69
LRRK2Q5S007 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.52□□□□□ -1.69
LRRK2Q5S007 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC4.52□□□□□ -1.69
LRRK2Q5S007 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC4.52□□□□□ -1.69
LRRK2Q5S007 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.52□□□□□ -1.69
LRRK2Q5S007 OR1L6-202ENST00000373684 1044 ntBASIC4.52□□□□□ -1.69
LRRK2Q5S007 OR2B7P-201ENST00000429302 934 ntBASIC4.52□□□□□ -1.69
LRRK2Q5S007 Z95152.1-201ENST00000453556 656 ntBASIC4.52□□□□□ -1.69
LRRK2Q5S007 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.52□□□□□ -1.69
LRRK2Q5S007 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.52□□□□□ -1.69
LRRK2Q5S007 AC022182.1-202ENST00000529234 580 ntTSL 2 BASIC4.52□□□□□ -1.69
LRRK2Q5S007 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC4.52□□□□□ -1.69
LRRK2Q5S007 AC004890.3-201ENST00000605566 1095 ntBASIC4.52□□□□□ -1.69
LRRK2Q5S007 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
LRRK2Q5S007 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
LRRK2Q5S007 ZNF652P1-201ENST00000442420 1309 ntBASIC4.52□□□□□ -1.69
LRRK2Q5S007 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
LRRK2Q5S007 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC4.52□□□□□ -1.69
LRRK2Q5S007 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC4.52□□□□□ -1.69
LRRK2Q5S007 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.52□□□□□ -1.69
LRRK2Q5S007 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
LRRK2Q5S007 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LRRK2Q5S007 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
LRRK2Q5S007 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC4.52□□□□□ -1.69
LRRK2Q5S007 AL121886.1-201ENST00000358609 435 ntBASIC4.52□□□□□ -1.69
LRRK2Q5S007 SNORD113.2-201ENST00000364166 89 ntBASIC4.52□□□□□ -1.69
LRRK2Q5S007 RNA5SP428-201ENST00000365129 132 ntBASIC4.52□□□□□ -1.69
LRRK2Q5S007 OR6C69P-201ENST00000394268 893 ntBASIC4.52□□□□□ -1.69
LRRK2Q5S007 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC4.52□□□□□ -1.69
LRRK2Q5S007 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
LRRK2Q5S007 AC020593.1-201ENST00000507399 299 ntBASIC4.52□□□□□ -1.69
LRRK2Q5S007 AC106806.2-201ENST00000509365 500 ntBASIC4.52□□□□□ -1.69
LRRK2Q5S007 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC4.52□□□□□ -1.69
LRRK2Q5S007 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
LRRK2Q5S007 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.52□□□□□ -1.69
LRRK2Q5S007 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.52□□□□□ -1.69
LRRK2Q5S007 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.52□□□□□ -1.69
LRRK2Q5S007 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC4.52□□□□□ -1.69
LRRK2Q5S007 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.52□□□□□ -1.69
LRRK2Q5S007 MTCO1P1-201ENST00000624263 1081 ntBASIC4.52□□□□□ -1.69
LRRK2Q5S007 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.52□□□□□ -1.69
LRRK2Q5S007 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LRRK2Q5S007 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC4.52□□□□□ -1.69
LRRK2Q5S007 IL13RA2-202ENST00000371936 1498 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
LRRK2Q5S007 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
LRRK2Q5S007 AC068446.1-201ENST00000556425 1549 ntBASIC4.52□□□□□ -1.69
LRRK2Q5S007 AC015813.6-201ENST00000624409 5808 ntBASIC4.52□□□□□ -1.69
LRRK2Q5S007 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LRRK2Q5S007 AC003973.3-201ENST00000624863 2822 ntBASIC4.52□□□□□ -1.69
LRRK2Q5S007 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LRRK2Q5S007 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
LRRK2Q5S007 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LRRK2Q5S007 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.52□□□□□ -1.69
LRRK2Q5S007 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
LRRK2Q5S007 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
LRRK2Q5S007 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC4.51□□□□□ -1.69
LRRK2Q5S007 AL137845.2-201ENST00000444292 988 ntBASIC4.51□□□□□ -1.69
LRRK2Q5S007 RSU1P1-201ENST00000453416 441 ntBASIC4.51□□□□□ -1.69
LRRK2Q5S007 RPL23AP24-201ENST00000458203 385 ntBASIC4.51□□□□□ -1.69
LRRK2Q5S007 RPL7P19-201ENST00000469948 618 ntBASIC4.51□□□□□ -1.69
LRRK2Q5S007 OR52A4P-201ENST00000472867 958 ntBASIC4.51□□□□□ -1.69
LRRK2Q5S007 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.51□□□□□ -1.69
LRRK2Q5S007 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.51□□□□□ -1.69
LRRK2Q5S007 AK3P4-201ENST00000504283 583 ntBASIC4.51□□□□□ -1.69
LRRK2Q5S007 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.51□□□□□ -1.69
LRRK2Q5S007 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
LRRK2Q5S007 ENAH-209ENST00000635051 3308 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
LRRK2Q5S007 NPL-201ENST00000258317 2461 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
LRRK2Q5S007 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
LRRK2Q5S007 AC114774.1-201ENST00000507410 1770 ntBASIC4.51□□□□□ -1.69
LRRK2Q5S007 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
LRRK2Q5S007 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms