Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 AC104118.1-201ENST00000607625 1589 ntBASIC6.3□□□□□ -1.4
CNTNAP1P78357 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.3□□□□□ -1.4
CNTNAP1P78357 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
CNTNAP1P78357 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CNTNAP1P78357 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
CNTNAP1P78357 AL389915.1-201ENST00000422463 466 ntBASIC6.3□□□□□ -1.4
CNTNAP1P78357 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC6.3□□□□□ -1.4
CNTNAP1P78357 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC6.3□□□□□ -1.4
CNTNAP1P78357 MRPS21P3-201ENST00000436696 262 ntBASIC6.3□□□□□ -1.4
CNTNAP1P78357 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC6.3□□□□□ -1.4
CNTNAP1P78357 H3F3BP1-201ENST00000440551 403 ntBASIC6.3□□□□□ -1.4
CNTNAP1P78357 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC6.3□□□□□ -1.4
CNTNAP1P78357 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC6.3□□□□□ -1.4
CNTNAP1P78357 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.3□□□□□ -1.4
CNTNAP1P78357 AC111000.3-201ENST00000508057 576 ntBASIC6.3□□□□□ -1.4
CNTNAP1P78357 GTF2F2P1-201ENST00000511083 675 ntBASIC6.3□□□□□ -1.4
CNTNAP1P78357 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC6.3□□□□□ -1.4
CNTNAP1P78357 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC6.3□□□□□ -1.4
CNTNAP1P78357 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC6.3□□□□□ -1.4
CNTNAP1P78357 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
CNTNAP1P78357 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
CNTNAP1P78357 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
CNTNAP1P78357 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
CNTNAP1P78357 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
CNTNAP1P78357 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC6.3□□□□□ -1.4
CNTNAP1P78357 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CNTNAP1P78357 MIR3667-201ENST00000581025 74 ntBASIC6.3□□□□□ -1.4
CNTNAP1P78357 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC6.3□□□□□ -1.4
CNTNAP1P78357 AL391358.1-201ENST00000605342 190 ntBASIC6.3□□□□□ -1.4
CNTNAP1P78357 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CNTNAP1P78357 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.29□□□□□ -1.4
CNTNAP1P78357 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CNTNAP1P78357 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CNTNAP1P78357 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
CNTNAP1P78357 TTC41P-205ENST00000551270 3963 ntBASIC6.29□□□□□ -1.4
CNTNAP1P78357 AC092747.4-201ENST00000620519 1861 ntBASIC6.29□□□□□ -1.4
CNTNAP1P78357 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CNTNAP1P78357 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CNTNAP1P78357 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CNTNAP1P78357 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC6.29□□□□□ -1.4
CNTNAP1P78357 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC6.29□□□□□ -1.4
CNTNAP1P78357 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
CNTNAP1P78357 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
CNTNAP1P78357 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CNTNAP1P78357 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CNTNAP1P78357 NUDT19P3-201ENST00000404698 555 ntBASIC6.29□□□□□ -1.4
CNTNAP1P78357 RPS27AP7-201ENST00000422792 455 ntBASIC6.29□□□□□ -1.4
CNTNAP1P78357 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC6.29□□□□□ -1.4
CNTNAP1P78357 ATP6V0E1P2-201ENST00000441771 245 ntBASIC6.29□□□□□ -1.4
CNTNAP1P78357 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC6.29□□□□□ -1.4
CNTNAP1P78357 RPL36AP15-201ENST00000444514 266 ntBASIC6.29□□□□□ -1.4
CNTNAP1P78357 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC6.29□□□□□ -1.4
CNTNAP1P78357 AC128716.1-201ENST00000475129 166 ntBASIC6.29□□□□□ -1.4
CNTNAP1P78357 AP001804.1-201ENST00000526868 919 ntBASIC6.29□□□□□ -1.4
CNTNAP1P78357 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC6.29□□□□□ -1.4
CNTNAP1P78357 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC6.29□□□□□ -1.4
CNTNAP1P78357 AC060780.2-201ENST00000589047 198 ntBASIC6.29□□□□□ -1.4
CNTNAP1P78357 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC6.29□□□□□ -1.4
CNTNAP1P78357 MTCO1P1-201ENST00000624263 1081 ntBASIC6.29□□□□□ -1.4
CNTNAP1P78357 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
CNTNAP1P78357 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CNTNAP1P78357 AL731532.1-201ENST00000623972 4236 ntBASIC6.28□□□□□ -1.4
CNTNAP1P78357 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
CNTNAP1P78357 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CNTNAP1P78357 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
CNTNAP1P78357 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC6.28□□□□□ -1.4
CNTNAP1P78357 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.28□□□□□ -1.4
CNTNAP1P78357 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
CNTNAP1P78357 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CNTNAP1P78357 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CNTNAP1P78357 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CNTNAP1P78357 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CNTNAP1P78357 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC6.28□□□□□ -1.4
CNTNAP1P78357 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
CNTNAP1P78357 AL158152.1-201ENST00000602652 1435 ntBASIC6.28□□□□□ -1.4
CNTNAP1P78357 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
CNTNAP1P78357 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CNTNAP1P78357 AC104964.3-201ENST00000606115 2860 ntBASIC6.28□□□□□ -1.4
CNTNAP1P78357 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CNTNAP1P78357 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC6.28□□□□□ -1.4
CNTNAP1P78357 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.28□□□□□ -1.4
CNTNAP1P78357 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6.28□□□□□ -1.4
CNTNAP1P78357 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CNTNAP1P78357 AC009237.10-201ENST00000414112 510 ntBASIC6.28□□□□□ -1.4
CNTNAP1P78357 AC009237.5-201ENST00000414271 501 ntBASIC6.28□□□□□ -1.4
CNTNAP1P78357 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC6.28□□□□□ -1.4
CNTNAP1P78357 RPL7P57-201ENST00000423238 740 ntBASIC6.28□□□□□ -1.4
CNTNAP1P78357 RPS4XP16-201ENST00000427198 791 ntBASIC6.28□□□□□ -1.4
CNTNAP1P78357 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC6.28□□□□□ -1.4
CNTNAP1P78357 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC6.28□□□□□ -1.4
CNTNAP1P78357 AC140172.1-201ENST00000502928 141 ntBASIC6.28□□□□□ -1.4
CNTNAP1P78357 AC083829.1-201ENST00000503756 657 ntBASIC6.28□□□□□ -1.4
CNTNAP1P78357 MAL2-201ENST00000522112 573 ntTSL 4 BASIC6.28□□□□□ -1.4
CNTNAP1P78357 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC6.28□□□□□ -1.4
CNTNAP1P78357 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC6.28□□□□□ -1.4
CNTNAP1P78357 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CNTNAP1P78357 MIR4277-201ENST00000578298 84 ntBASIC6.28□□□□□ -1.4
CNTNAP1P78357 AL353729.2-201ENST00000605859 1249 ntBASIC6.28□□□□□ -1.4
CNTNAP1P78357 AL138960.1-201ENST00000613838 513 ntBASIC6.28□□□□□ -1.4
CNTNAP1P78357 NEK3-211ENST00000629912 141 ntTSL 5 BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms