Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 RNA5SP335-201ENST00000363817 110 ntBASIC6.66□□□□□ -1.34
RHBDL3P58872 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC6.66□□□□□ -1.34
RHBDL3P58872 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
RHBDL3P58872 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
RHBDL3P58872 TAF9BP2-201ENST00000400856 499 ntBASIC6.66□□□□□ -1.34
RHBDL3P58872 RNU4-34P-201ENST00000410431 124 ntBASIC6.66□□□□□ -1.34
RHBDL3P58872 RN7SKP279-201ENST00000411383 298 ntBASIC6.66□□□□□ -1.34
RHBDL3P58872 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC6.66□□□□□ -1.34
RHBDL3P58872 AC007394.1-201ENST00000421941 531 ntBASIC6.66□□□□□ -1.34
RHBDL3P58872 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC6.66□□□□□ -1.34
RHBDL3P58872 AL596266.1-201ENST00000448132 400 ntBASIC6.66□□□□□ -1.34
RHBDL3P58872 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC6.66□□□□□ -1.34
RHBDL3P58872 AC005532.2-201ENST00000467154 373 ntBASIC6.66□□□□□ -1.34
RHBDL3P58872 AC010468.3-201ENST00000508225 458 ntBASIC6.66□□□□□ -1.34
RHBDL3P58872 AC093815.1-201ENST00000508637 280 ntBASIC6.66□□□□□ -1.34
RHBDL3P58872 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC6.66□□□□□ -1.34
RHBDL3P58872 RNU6-1308P-201ENST00000516817 103 ntBASIC6.66□□□□□ -1.34
RHBDL3P58872 SNORA76.2-201ENST00000517095 137 ntBASIC6.66□□□□□ -1.34
RHBDL3P58872 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC6.66□□□□□ -1.34
RHBDL3P58872 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.66□□□□□ -1.34
RHBDL3P58872 C1GALT1P1-201ENST00000548895 1089 ntBASIC6.66□□□□□ -1.34
RHBDL3P58872 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC6.66□□□□□ -1.34
RHBDL3P58872 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC6.66□□□□□ -1.34
RHBDL3P58872 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC6.66□□□□□ -1.34
RHBDL3P58872 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC6.66□□□□□ -1.34
RHBDL3P58872 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC6.66□□□□□ -1.34
RHBDL3P58872 AC005972.3-201ENST00000606304 481 ntBASIC6.66□□□□□ -1.34
RHBDL3P58872 AL122125.1-201ENST00000616999 600 ntBASIC6.66□□□□□ -1.34
RHBDL3P58872 AC008115.4-201ENST00000619780 775 ntBASIC6.66□□□□□ -1.34
RHBDL3P58872 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC6.66□□□□□ -1.34
RHBDL3P58872 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
RHBDL3P58872 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
RHBDL3P58872 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
RHBDL3P58872 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
RHBDL3P58872 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.66□□□□□ -1.34
RHBDL3P58872 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
RHBDL3P58872 AC010266.2-201ENST00000564741 3255 ntBASIC6.65□□□□□ -1.34
RHBDL3P58872 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.65□□□□□ -1.34
RHBDL3P58872 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
RHBDL3P58872 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
RHBDL3P58872 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
RHBDL3P58872 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.65□□□□□ -1.34
RHBDL3P58872 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
RHBDL3P58872 RN7SKP6-201ENST00000364795 319 ntBASIC6.65□□□□□ -1.34
RHBDL3P58872 OR6K3-202ENST00000368146 996 ntBASIC6.65□□□□□ -1.34
RHBDL3P58872 SNORA16A-201ENST00000384342 137 ntBASIC6.65□□□□□ -1.34
RHBDL3P58872 NANOGP4-201ENST00000427230 913 ntBASIC6.65□□□□□ -1.34
RHBDL3P58872 PTP4A1P3-201ENST00000433661 420 ntBASIC6.65□□□□□ -1.34
RHBDL3P58872 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC6.65□□□□□ -1.34
RHBDL3P58872 RPL12P39-201ENST00000455456 496 ntBASIC6.65□□□□□ -1.34
RHBDL3P58872 OR2AO1P-201ENST00000476497 403 ntBASIC6.65□□□□□ -1.34
RHBDL3P58872 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC6.65□□□□□ -1.34
RHBDL3P58872 RN7SL30P-201ENST00000488416 306 ntBASIC6.65□□□□□ -1.34
RHBDL3P58872 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
RHBDL3P58872 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC6.65□□□□□ -1.34
RHBDL3P58872 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC6.65□□□□□ -1.34
RHBDL3P58872 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC6.65□□□□□ -1.34
RHBDL3P58872 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
RHBDL3P58872 BLZF2P-201ENST00000553776 1130 ntBASIC6.65□□□□□ -1.34
RHBDL3P58872 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC6.65□□□□□ -1.34
RHBDL3P58872 AC018552.1-201ENST00000562099 811 ntBASIC6.65□□□□□ -1.34
RHBDL3P58872 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
RHBDL3P58872 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC6.65□□□□□ -1.34
RHBDL3P58872 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC6.65□□□□□ -1.34
RHBDL3P58872 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC6.65□□□□□ -1.34
RHBDL3P58872 HIRAP1-201ENST00000605318 787 ntBASIC6.65□□□□□ -1.34
RHBDL3P58872 AL133481.2-203ENST00000607558 139 ntBASIC6.65□□□□□ -1.34
RHBDL3P58872 AC211433.2-201ENST00000608433 387 ntBASIC6.65□□□□□ -1.34
RHBDL3P58872 AL352984.2-202ENST00000613699 155 ntBASIC6.65□□□□□ -1.34
RHBDL3P58872 MIR1264-201ENST00000616374 69 ntBASIC6.65□□□□□ -1.34
RHBDL3P58872 AC021766.1-201ENST00000624404 741 ntBASIC6.65□□□□□ -1.34
RHBDL3P58872 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC6.65□□□□□ -1.34
RHBDL3P58872 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
RHBDL3P58872 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC6.65□□□□□ -1.35
RHBDL3P58872 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.65□□□□□ -1.35
RHBDL3P58872 AL512283.1-201ENST00000606756 1384 ntBASIC6.65□□□□□ -1.35
RHBDL3P58872 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
RHBDL3P58872 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
RHBDL3P58872 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC6.65□□□□□ -1.35
RHBDL3P58872 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC6.65□□□□□ -1.35
RHBDL3P58872 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.35
RHBDL3P58872 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
RHBDL3P58872 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.35
RHBDL3P58872 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
RHBDL3P58872 AC019072.1-201ENST00000604535 1551 ntBASIC6.65□□□□□ -1.35
RHBDL3P58872 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.35
RHBDL3P58872 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.65□□□□□ -1.35
RHBDL3P58872 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.65□□□□□ -1.35
RHBDL3P58872 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.65□□□□□ -1.35
RHBDL3P58872 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
RHBDL3P58872 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
RHBDL3P58872 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC6.64□□□□□ -1.35
RHBDL3P58872 U3.2-201ENST00000362981 210 ntBASIC6.64□□□□□ -1.35
RHBDL3P58872 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
RHBDL3P58872 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC6.64□□□□□ -1.35
RHBDL3P58872 RNU6-225P-201ENST00000384613 103 ntBASIC6.64□□□□□ -1.35
RHBDL3P58872 RNU6ATAC18P-201ENST00000408413 101 ntBASIC6.64□□□□□ -1.35
RHBDL3P58872 RN7SKP273-201ENST00000411392 314 ntBASIC6.64□□□□□ -1.35
RHBDL3P58872 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC6.64□□□□□ -1.35
RHBDL3P58872 AL121882.1-201ENST00000422893 417 ntBASIC6.64□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms