Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AC008055.1-201ENST00000547032 609 ntBASIC5.59□□□□□ -1.51
CLRN1P58418 AC068305.2-201ENST00000550567 1205 ntBASIC5.59□□□□□ -1.51
CLRN1P58418 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CLRN1P58418 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.59□□□□□ -1.51
CLRN1P58418 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.59□□□□□ -1.51
CLRN1P58418 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLRN1P58418 MIR5708-201ENST00000579723 85 ntBASIC5.59□□□□□ -1.51
CLRN1P58418 RN7SL475P-201ENST00000583379 298 ntBASIC5.59□□□□□ -1.51
CLRN1P58418 AC026898.1-201ENST00000586404 571 ntBASIC5.59□□□□□ -1.51
CLRN1P58418 AL031281.1-201ENST00000604049 488 ntBASIC5.59□□□□□ -1.51
CLRN1P58418 AC106791.2-201ENST00000604680 391 ntBASIC5.59□□□□□ -1.51
CLRN1P58418 AL021368.3-201ENST00000607119 578 ntBASIC5.59□□□□□ -1.51
CLRN1P58418 MIR6811-201ENST00000620409 58 ntBASIC5.59□□□□□ -1.51
CLRN1P58418 AC091931.1-201ENST00000623488 728 ntBASIC5.59□□□□□ -1.51
CLRN1P58418 AC007603.3-201ENST00000636915 979 ntBASIC5.59□□□□□ -1.51
CLRN1P58418 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CLRN1P58418 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CLRN1P58418 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLRN1P58418 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLRN1P58418 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC5.59□□□□□ -1.51
CLRN1P58418 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CLRN1P58418 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC5.58□□□□□ -1.52
CLRN1P58418 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.58□□□□□ -1.52
CLRN1P58418 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC5.58□□□□□ -1.52
CLRN1P58418 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CLRN1P58418 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.58□□□□□ -1.52
CLRN1P58418 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CLRN1P58418 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CLRN1P58418 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CLRN1P58418 ZNF542P-204ENST00000482727 1305 ntBASIC5.58□□□□□ -1.52
CLRN1P58418 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CLRN1P58418 snoZ40.1-201ENST00000364540 72 ntBASIC5.58□□□□□ -1.52
CLRN1P58418 Y_RNA.465-201ENST00000384293 102 ntBASIC5.58□□□□□ -1.52
CLRN1P58418 AL360271.1-201ENST00000395679 510 ntBASIC5.58□□□□□ -1.52
CLRN1P58418 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLRN1P58418 HMGA1P8-201ENST00000414130 321 ntBASIC5.58□□□□□ -1.52
CLRN1P58418 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC5.58□□□□□ -1.52
CLRN1P58418 OSTCP4-201ENST00000424397 449 ntBASIC5.58□□□□□ -1.52
CLRN1P58418 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.58□□□□□ -1.52
CLRN1P58418 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC5.58□□□□□ -1.52
CLRN1P58418 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.58□□□□□ -1.52
CLRN1P58418 AL356121.1-201ENST00000442911 156 ntBASIC5.58□□□□□ -1.52
CLRN1P58418 MORF4-201ENST00000447135 971 ntBASIC5.58□□□□□ -1.52
CLRN1P58418 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CLRN1P58418 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC5.58□□□□□ -1.52
CLRN1P58418 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC5.58□□□□□ -1.52
CLRN1P58418 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.58□□□□□ -1.52
CLRN1P58418 AC026348.1-201ENST00000462549 1053 ntBASIC5.58□□□□□ -1.52
CLRN1P58418 RPL35AP19-201ENST00000469425 329 ntBASIC5.58□□□□□ -1.52
CLRN1P58418 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
CLRN1P58418 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.58□□□□□ -1.52
CLRN1P58418 BZW1P2-201ENST00000473537 826 ntBASIC5.58□□□□□ -1.52
CLRN1P58418 AOX3P-204ENST00000491025 2107 ntBASIC5.58□□□□□ -1.52
CLRN1P58418 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.58□□□□□ -1.52
CLRN1P58418 AC138866.2-201ENST00000508650 584 ntBASIC5.58□□□□□ -1.52
CLRN1P58418 GUSBP9-201ENST00000510138 584 ntBASIC5.58□□□□□ -1.52
CLRN1P58418 MTND5P13-201ENST00000513046 1079 ntBASIC5.58□□□□□ -1.52
CLRN1P58418 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC5.58□□□□□ -1.52
CLRN1P58418 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.58□□□□□ -1.52
CLRN1P58418 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC5.58□□□□□ -1.52
CLRN1P58418 AC090115.2-201ENST00000548060 883 ntBASIC5.58□□□□□ -1.52
CLRN1P58418 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC5.58□□□□□ -1.52
CLRN1P58418 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.58□□□□□ -1.52
CLRN1P58418 DUXAP1-201ENST00000556632 463 ntBASIC5.58□□□□□ -1.52
CLRN1P58418 AC002400.1-201ENST00000569310 726 ntBASIC5.58□□□□□ -1.52
CLRN1P58418 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.58□□□□□ -1.52
CLRN1P58418 MTCO1P40-201ENST00000574371 625 ntBASIC5.58□□□□□ -1.52
CLRN1P58418 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC5.58□□□□□ -1.52
CLRN1P58418 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC5.58□□□□□ -1.52
CLRN1P58418 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC5.58□□□□□ -1.52
CLRN1P58418 AP001542.2-201ENST00000593141 364 ntBASIC5.58□□□□□ -1.52
CLRN1P58418 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.58□□□□□ -1.52
CLRN1P58418 AL589765.6-201ENST00000601909 549 ntBASIC5.58□□□□□ -1.52
CLRN1P58418 AL163642.2-201ENST00000604722 1019 ntBASIC5.58□□□□□ -1.52
CLRN1P58418 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC5.58□□□□□ -1.52
CLRN1P58418 AL592148.2-201ENST00000612210 372 ntBASIC5.58□□□□□ -1.52
CLRN1P58418 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC5.58□□□□□ -1.52
CLRN1P58418 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.58□□□□□ -1.52
CLRN1P58418 AL035661.1-201ENST00000620459 1144 ntBASIC5.58□□□□□ -1.52
CLRN1P58418 AC091965.5-201ENST00000624785 342 ntBASIC5.58□□□□□ -1.52
CLRN1P58418 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC5.58□□□□□ -1.52
CLRN1P58418 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.58□□□□□ -1.52
CLRN1P58418 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC5.58□□□□□ -1.52
CLRN1P58418 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLRN1P58418 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.58□□□□□ -1.52
CLRN1P58418 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLRN1P58418 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CLRN1P58418 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLRN1P58418 SGO1P2-201ENST00000429458 1589 ntBASIC5.58□□□□□ -1.52
CLRN1P58418 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CLRN1P58418 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLRN1P58418 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLRN1P58418 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.58□□□□□ -1.52
CLRN1P58418 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC5.58□□□□□ -1.52
CLRN1P58418 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.58□□□□□ -1.52
CLRN1P58418 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.58□□□□□ -1.52
CLRN1P58418 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
CLRN1P58418 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.57□□□□□ -1.52
CLRN1P58418 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC5.57□□□□□ -1.52
CLRN1P58418 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 387.1 ms