Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CDH13P55290 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CDH13P55290 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5.32□□□□□ -1.56
CDH13P55290 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.32□□□□□ -1.56
CDH13P55290 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
CDH13P55290 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CDH13P55290 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CDH13P55290 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CDH13P55290 SPATA2P1-201ENST00000431223 2055 ntBASIC5.32□□□□□ -1.56
CDH13P55290 OR52B3P-201ENST00000314715 928 ntBASIC5.32□□□□□ -1.56
CDH13P55290 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.32□□□□□ -1.56
CDH13P55290 U3.7-201ENST00000363668 216 ntBASIC5.32□□□□□ -1.56
CDH13P55290 RNA5SP241-201ENST00000391326 114 ntBASIC5.32□□□□□ -1.56
CDH13P55290 GSTA12P-201ENST00000402398 508 ntBASIC5.32□□□□□ -1.56
CDH13P55290 LYPLA1P3-201ENST00000402650 695 ntBASIC5.32□□□□□ -1.56
CDH13P55290 RPS3AP2-201ENST00000407190 754 ntBASIC5.32□□□□□ -1.56
CDH13P55290 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.32□□□□□ -1.56
CDH13P55290 AC113412.1-201ENST00000425840 504 ntBASIC5.32□□□□□ -1.56
CDH13P55290 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC5.32□□□□□ -1.56
CDH13P55290 OR6D1P-201ENST00000436165 939 ntBASIC5.32□□□□□ -1.56
CDH13P55290 RPL12P18-201ENST00000437175 325 ntBASIC5.32□□□□□ -1.56
CDH13P55290 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.32□□□□□ -1.56
CDH13P55290 DNAJA1P5-201ENST00000440278 943 ntBASIC5.32□□□□□ -1.56
CDH13P55290 RBMY2TP-201ENST00000451162 947 ntBASIC5.32□□□□□ -1.56
CDH13P55290 RN7SL168P-201ENST00000463821 279 ntBASIC5.32□□□□□ -1.56
CDH13P55290 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.32□□□□□ -1.56
CDH13P55290 RN7SL741P-201ENST00000482473 289 ntBASIC5.32□□□□□ -1.56
CDH13P55290 EIF3LP3-201ENST00000495197 822 ntBASIC5.32□□□□□ -1.56
CDH13P55290 SSR3-208ENST00000496050 579 ntTSL 4 BASIC5.32□□□□□ -1.56
CDH13P55290 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.32□□□□□ -1.56
CDH13P55290 AC093770.1-201ENST00000511559 571 ntBASIC5.32□□□□□ -1.56
CDH13P55290 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.32□□□□□ -1.56
CDH13P55290 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.32□□□□□ -1.56
CDH13P55290 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CDH13P55290 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.32□□□□□ -1.56
CDH13P55290 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.32□□□□□ -1.56
CDH13P55290 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.32□□□□□ -1.56
CDH13P55290 MRPS21P7-201ENST00000566937 238 ntBASIC5.32□□□□□ -1.56
CDH13P55290 RN7SL290P-201ENST00000578661 300 ntBASIC5.32□□□□□ -1.56
CDH13P55290 AP001496.3-201ENST00000580230 913 ntBASIC5.32□□□□□ -1.56
CDH13P55290 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.32□□□□□ -1.56
CDH13P55290 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CDH13P55290 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC5.32□□□□□ -1.56
CDH13P55290 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.32□□□□□ -1.56
CDH13P55290 MTCO2P22-201ENST00000603246 681 ntBASIC5.32□□□□□ -1.56
CDH13P55290 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.32□□□□□ -1.56
CDH13P55290 AC135803.1-201ENST00000608748 565 ntBASIC5.32□□□□□ -1.56
CDH13P55290 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.32□□□□□ -1.56
CDH13P55290 AC138965.3-201ENST00000623875 498 ntBASIC5.32□□□□□ -1.56
CDH13P55290 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.32□□□□□ -1.56
CDH13P55290 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.32□□□□□ -1.56
CDH13P55290 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CDH13P55290 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.32□□□□□ -1.56
CDH13P55290 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
CDH13P55290 AC106872.5-201ENST00000508856 1416 ntBASIC5.31□□□□□ -1.56
CDH13P55290 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.31□□□□□ -1.56
CDH13P55290 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.31□□□□□ -1.56
CDH13P55290 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CDH13P55290 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CDH13P55290 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CDH13P55290 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.31□□□□□ -1.56
CDH13P55290 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CDH13P55290 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
CDH13P55290 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CDH13P55290 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.31□□□□□ -1.56
CDH13P55290 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.31□□□□□ -1.56
CDH13P55290 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CDH13P55290 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.31□□□□□ -1.56
CDH13P55290 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CDH13P55290 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CDH13P55290 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CDH13P55290 SNORD51.1-201ENST00000365405 77 ntBASIC5.31□□□□□ -1.56
CDH13P55290 RN7SKP187-201ENST00000365536 330 ntBASIC5.31□□□□□ -1.56
CDH13P55290 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.31□□□□□ -1.56
CDH13P55290 MIR551A-201ENST00000385042 96 ntBASIC5.31□□□□□ -1.56
CDH13P55290 AL034403.1-201ENST00000399414 885 ntBASIC5.31□□□□□ -1.56
CDH13P55290 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
CDH13P55290 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.31□□□□□ -1.56
CDH13P55290 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CDH13P55290 RPS26P4-201ENST00000431743 355 ntBASIC5.31□□□□□ -1.56
CDH13P55290 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC5.31□□□□□ -1.56
CDH13P55290 AC092106.1-201ENST00000444291 373 ntBASIC5.31□□□□□ -1.56
CDH13P55290 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC5.31□□□□□ -1.56
CDH13P55290 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.31□□□□□ -1.56
CDH13P55290 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CDH13P55290 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.31□□□□□ -1.56
CDH13P55290 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
CDH13P55290 RPL12P24-201ENST00000474907 486 ntBASIC5.31□□□□□ -1.56
CDH13P55290 RPL37AP8-201ENST00000494116 276 ntBASIC5.31□□□□□ -1.56
CDH13P55290 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CDH13P55290 AC109464.1-201ENST00000511091 819 ntBASIC5.31□□□□□ -1.56
CDH13P55290 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.31□□□□□ -1.56
CDH13P55290 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.31□□□□□ -1.56
CDH13P55290 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC5.31□□□□□ -1.56
CDH13P55290 AC034244.2-201ENST00000514668 858 ntBASIC5.31□□□□□ -1.56
CDH13P55290 AC022826.1-201ENST00000519383 805 ntBASIC5.31□□□□□ -1.56
CDH13P55290 AC024405.1-201ENST00000532521 1042 ntBASIC5.31□□□□□ -1.56
CDH13P55290 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC5.31□□□□□ -1.56
CDH13P55290 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.31□□□□□ -1.56
CDH13P55290 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms