Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CDH12P55289 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.24□□□□□ -1.57
CDH12P55289 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CDH12P55289 RAD1P1-201ENST00000231383 813 ntBASIC5.24□□□□□ -1.57
CDH12P55289 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CDH12P55289 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CDH12P55289 GPS2P1-201ENST00000411761 986 ntBASIC5.24□□□□□ -1.57
CDH12P55289 AL357752.1-201ENST00000412817 349 ntBASIC5.24□□□□□ -1.57
CDH12P55289 CBX1P3-201ENST00000413296 527 ntBASIC5.24□□□□□ -1.57
CDH12P55289 BX284632.2-201ENST00000421091 399 ntBASIC5.24□□□□□ -1.57
CDH12P55289 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.24□□□□□ -1.57
CDH12P55289 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC5.24□□□□□ -1.57
CDH12P55289 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.24□□□□□ -1.57
CDH12P55289 RRM2P4-201ENST00000441721 562 ntBASIC5.24□□□□□ -1.57
CDH12P55289 AL512605.1-202ENST00000441919 381 ntBASIC5.24□□□□□ -1.57
CDH12P55289 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC5.24□□□□□ -1.57
CDH12P55289 AL359955.2-201ENST00000445380 353 ntBASIC5.24□□□□□ -1.57
CDH12P55289 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC5.24□□□□□ -1.57
CDH12P55289 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
CDH12P55289 AL122020.1-201ENST00000472287 459 ntBASIC5.24□□□□□ -1.57
CDH12P55289 RPL12P24-201ENST00000474907 486 ntBASIC5.24□□□□□ -1.57
CDH12P55289 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC5.24□□□□□ -1.57
CDH12P55289 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.24□□□□□ -1.57
CDH12P55289 AC114322.1-201ENST00000506771 926 ntBASIC5.24□□□□□ -1.57
CDH12P55289 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC5.24□□□□□ -1.57
CDH12P55289 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC5.24□□□□□ -1.57
CDH12P55289 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC5.24□□□□□ -1.57
CDH12P55289 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC5.24□□□□□ -1.57
CDH12P55289 AC139365.2-201ENST00000517972 253 ntBASIC5.24□□□□□ -1.57
CDH12P55289 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CDH12P55289 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.24□□□□□ -1.57
CDH12P55289 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.24□□□□□ -1.57
CDH12P55289 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CDH12P55289 AL512310.9-201ENST00000553311 948 ntBASIC5.24□□□□□ -1.57
CDH12P55289 AL356801.1-201ENST00000559320 294 ntBASIC5.24□□□□□ -1.57
CDH12P55289 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.24□□□□□ -1.57
CDH12P55289 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC5.24□□□□□ -1.57
CDH12P55289 COX6CP7-201ENST00000597056 208 ntBASIC5.24□□□□□ -1.57
CDH12P55289 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.24□□□□□ -1.57
CDH12P55289 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.24□□□□□ -1.57
CDH12P55289 AC013244.3-201ENST00000605614 388 ntBASIC5.24□□□□□ -1.57
CDH12P55289 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.24□□□□□ -1.57
CDH12P55289 AL162574.1-201ENST00000615702 950 ntBASIC5.24□□□□□ -1.57
CDH12P55289 AP001052.1-201ENST00000626421 99 ntBASIC5.24□□□□□ -1.57
CDH12P55289 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
CDH12P55289 PDZK1P1-202ENST00000425209 1350 ntBASIC5.24□□□□□ -1.57
CDH12P55289 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.24□□□□□ -1.57
CDH12P55289 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CDH12P55289 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.24□□□□□ -1.57
CDH12P55289 AP001284.1-201ENST00000528393 2118 ntBASIC5.24□□□□□ -1.57
CDH12P55289 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CDH12P55289 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CDH12P55289 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CDH12P55289 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.23□□□□□ -1.57
CDH12P55289 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CDH12P55289 AL031595.2-201ENST00000624215 19071 ntBASIC5.23□□□□□ -1.57
CDH12P55289 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
CDH12P55289 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CDH12P55289 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CDH12P55289 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CDH12P55289 RN7SKP28-201ENST00000364770 305 ntBASIC5.23□□□□□ -1.57
CDH12P55289 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CDH12P55289 RNU6-354P-201ENST00000383862 107 ntBASIC5.23□□□□□ -1.57
CDH12P55289 RNU6-610P-201ENST00000384264 107 ntBASIC5.23□□□□□ -1.57
CDH12P55289 RNA5SP431-201ENST00000410312 120 ntBASIC5.23□□□□□ -1.57
CDH12P55289 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.23□□□□□ -1.57
CDH12P55289 MRPL53P1-201ENST00000414323 319 ntBASIC5.23□□□□□ -1.57
CDH12P55289 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.23□□□□□ -1.57
CDH12P55289 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC5.23□□□□□ -1.57
CDH12P55289 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC5.23□□□□□ -1.57
CDH12P55289 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC5.23□□□□□ -1.57
CDH12P55289 AC126120.1-201ENST00000431082 470 ntBASIC5.23□□□□□ -1.57
CDH12P55289 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC5.23□□□□□ -1.57
CDH12P55289 AC006994.1-201ENST00000438212 839 ntBASIC5.23□□□□□ -1.57
CDH12P55289 AMYP1-201ENST00000440059 1023 ntBASIC5.23□□□□□ -1.57
CDH12P55289 MTND1P26-201ENST00000440488 538 ntBASIC5.23□□□□□ -1.57
CDH12P55289 RPL7P55-201ENST00000450522 746 ntBASIC5.23□□□□□ -1.57
CDH12P55289 AC104164.3-201ENST00000467363 1258 ntBASIC5.23□□□□□ -1.57
CDH12P55289 AC090602.1-201ENST00000469695 252 ntBASIC5.23□□□□□ -1.57
CDH12P55289 CYCSP20-201ENST00000473154 315 ntBASIC5.23□□□□□ -1.57
CDH12P55289 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CDH12P55289 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.23□□□□□ -1.57
CDH12P55289 WDR78-207ENST00000488333 613 ntTSL 3 BASIC5.23□□□□□ -1.57
CDH12P55289 RPL9P15-201ENST00000491096 532 ntBASIC5.23□□□□□ -1.57
CDH12P55289 AL117692.1-201ENST00000494283 713 ntBASIC5.23□□□□□ -1.57
CDH12P55289 OR5H3P-201ENST00000502817 919 ntBASIC5.23□□□□□ -1.57
CDH12P55289 AC069306.1-201ENST00000507006 843 ntBASIC5.23□□□□□ -1.57
CDH12P55289 AC021146.7-201ENST00000509604 775 ntBASIC5.23□□□□□ -1.57
CDH12P55289 AC026782.2-201ENST00000510845 636 ntBASIC5.23□□□□□ -1.57
CDH12P55289 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.23□□□□□ -1.57
CDH12P55289 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CDH12P55289 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.23□□□□□ -1.57
CDH12P55289 RN7SKP183-201ENST00000517169 324 ntBASIC5.23□□□□□ -1.57
CDH12P55289 AC026407.1-201ENST00000518369 204 ntBASIC5.23□□□□□ -1.57
CDH12P55289 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.23□□□□□ -1.57
CDH12P55289 HAUS1P3-201ENST00000523909 662 ntBASIC5.23□□□□□ -1.57
CDH12P55289 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC5.23□□□□□ -1.57
CDH12P55289 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.23□□□□□ -1.57
CDH12P55289 AC122688.1-201ENST00000541494 223 ntBASIC5.23□□□□□ -1.57
CDH12P55289 AC079905.1-201ENST00000549280 475 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms