Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC7.11□□□□□ -1.27
EPHA4P54764 C1D-202ENST00000407324 1379 ntTSL 3 BASIC7.11□□□□□ -1.27
EPHA4P54764 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC7.11□□□□□ -1.27
EPHA4P54764 DTNA-205ENST00000399113 2232 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
EPHA4P54764 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC7.11□□□□□ -1.27
EPHA4P54764 LGI1-211ENST00000630047 1751 ntTSL 2 BASIC7.11□□□□□ -1.27
EPHA4P54764 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
EPHA4P54764 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
EPHA4P54764 EYA1-202ENST00000340726 4326 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
EPHA4P54764 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
EPHA4P54764 OR4A15-201ENST00000314706 1035 ntBASIC7.11□□□□□ -1.27
EPHA4P54764 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
EPHA4P54764 FAM205C-201ENST00000340783 983 ntAPPRIS ALT2 TSL 4 BASIC7.11□□□□□ -1.27
EPHA4P54764 SNRPD3-202ENST00000402849 567 ntTSL 2 BASIC7.11□□□□□ -1.27
EPHA4P54764 AL034374.1-201ENST00000406329 351 ntBASIC7.11□□□□□ -1.27
EPHA4P54764 ZNF37CP-201ENST00000406795 241 ntBASIC7.11□□□□□ -1.27
EPHA4P54764 PPIAP23-201ENST00000420099 497 ntBASIC7.11□□□□□ -1.27
EPHA4P54764 AL731892.1-201ENST00000437364 1192 ntBASIC7.11□□□□□ -1.27
EPHA4P54764 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC7.11□□□□□ -1.27
EPHA4P54764 AC123904.1-201ENST00000441072 368 ntBASIC7.11□□□□□ -1.27
EPHA4P54764 AC079781.1-201ENST00000441505 394 ntBASIC7.11□□□□□ -1.27
EPHA4P54764 RPL7P59-201ENST00000447700 943 ntBASIC7.11□□□□□ -1.27
EPHA4P54764 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC7.11□□□□□ -1.27
EPHA4P54764 PMS2P11-201ENST00000451831 574 ntBASIC7.11□□□□□ -1.27
EPHA4P54764 TUBBP11-201ENST00000472255 252 ntBASIC7.11□□□□□ -1.27
EPHA4P54764 RPS29P25-201ENST00000481709 171 ntBASIC7.11□□□□□ -1.27
EPHA4P54764 RPL35P6-201ENST00000490024 372 ntBASIC7.11□□□□□ -1.27
EPHA4P54764 AC108120.1-201ENST00000506543 991 ntBASIC7.11□□□□□ -1.27
EPHA4P54764 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC7.11□□□□□ -1.27
EPHA4P54764 RPS23-208ENST00000512493 443 ntTSL 3 BASIC7.11□□□□□ -1.27
EPHA4P54764 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC7.11□□□□□ -1.27
EPHA4P54764 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC7.11□□□□□ -1.27
EPHA4P54764 RPS20-202ENST00000518875 671 ntTSL 2 BASIC7.11□□□□□ -1.27
EPHA4P54764 HSPA8P13-201ENST00000523715 472 ntBASIC7.11□□□□□ -1.27
EPHA4P54764 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC7.11□□□□□ -1.27
EPHA4P54764 OR5F2P-201ENST00000532761 941 ntBASIC7.11□□□□□ -1.27
EPHA4P54764 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC7.11□□□□□ -1.27
EPHA4P54764 AC006205.1-201ENST00000538067 389 ntTSL 2 BASIC7.11□□□□□ -1.27
EPHA4P54764 AC126177.6-201ENST00000550420 1009 ntBASIC7.11□□□□□ -1.27
EPHA4P54764 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC7.11□□□□□ -1.27
EPHA4P54764 CYCSP2-201ENST00000558168 301 ntBASIC7.11□□□□□ -1.27
EPHA4P54764 NQO1-205ENST00000561500 891 ntTSL 3 BASIC7.11□□□□□ -1.27
EPHA4P54764 AC104581.3-201ENST00000573621 348 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
EPHA4P54764 RBM4-213ENST00000578778 582 ntTSL 4 BASIC7.11□□□□□ -1.27
EPHA4P54764 YWHAQP7-201ENST00000603536 658 ntBASIC7.11□□□□□ -1.27
EPHA4P54764 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC7.11□□□□□ -1.27
EPHA4P54764 AL161931.1-201ENST00000612768 246 ntBASIC7.11□□□□□ -1.27
EPHA4P54764 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC7.11□□□□□ -1.27
EPHA4P54764 AC025162.2-201ENST00000619602 560 ntBASIC7.11□□□□□ -1.27
EPHA4P54764 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC7.11□□□□□ -1.27
EPHA4P54764 AL121985.3-201ENST00000620690 523 ntBASIC7.11□□□□□ -1.27
EPHA4P54764 AC007347.2-201ENST00000623044 180 ntBASIC7.11□□□□□ -1.27
EPHA4P54764 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC7.11□□□□□ -1.27
EPHA4P54764 ASB8-218ENST00000629941 278 ntTSL 5 BASIC7.11□□□□□ -1.27
EPHA4P54764 AL590396.3-201ENST00000636334 300 ntBASIC7.11□□□□□ -1.27
EPHA4P54764 JAML-213ENST00000640745 951 ntTSL 5 BASIC7.11□□□□□ -1.27
EPHA4P54764 AC138627.1-203ENST00000641872 1680 ntBASIC7.11□□□□□ -1.27
EPHA4P54764 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC7.11□□□□□ -1.27
EPHA4P54764 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
EPHA4P54764 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
EPHA4P54764 SORBS1-207ENST00000371239 2436 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
EPHA4P54764 GPM6A-202ENST00000393658 2821 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
EPHA4P54764 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC7.11□□□□□ -1.27
EPHA4P54764 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
EPHA4P54764 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
EPHA4P54764 PARP4P1-201ENST00000435945 2337 ntBASIC7.11□□□□□ -1.27
EPHA4P54764 FHL1-216ENST00000535737 2325 ntTSL 3 BASIC7.11□□□□□ -1.27
EPHA4P54764 TBCCD1-203ENST00000424280 3058 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
EPHA4P54764 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
EPHA4P54764 CCL16-205ENST00000611905 1506 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
EPHA4P54764 RBM43-201ENST00000331426 4192 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
EPHA4P54764 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
EPHA4P54764 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
EPHA4P54764 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC7.11□□□□□ -1.27
EPHA4P54764 ZMYM6-203ENST00000373333 1473 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
EPHA4P54764 TBX5-202ENST00000349716 3585 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
EPHA4P54764 ZNFX1-202ENST00000371752 7212 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
EPHA4P54764 MAPK10-242ENST00000639242 3088 ntAPPRIS P2 TSL 5 BASIC7.1□□□□□ -1.27
EPHA4P54764 OR10K2-202ENST00000641042 3023 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
EPHA4P54764 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
EPHA4P54764 LRRC28-201ENST00000301981 5971 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
EPHA4P54764 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC7.1□□□□□ -1.27
EPHA4P54764 ZNF10-202ENST00000402932 1967 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
EPHA4P54764 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC7.1□□□□□ -1.27
EPHA4P54764 OR5M2P-202ENST00000641241 4242 ntBASIC7.1□□□□□ -1.27
EPHA4P54764 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
EPHA4P54764 PART1-203ENST00000515734 2569 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
EPHA4P54764 GAPDHP24-201ENST00000328713 983 ntBASIC7.1□□□□□ -1.27
EPHA4P54764 RNU4-81P-201ENST00000363561 144 ntBASIC7.1□□□□□ -1.27
EPHA4P54764 RNY4P34-201ENST00000364779 95 ntBASIC7.1□□□□□ -1.27
EPHA4P54764 RNU6-483P-201ENST00000384088 108 ntBASIC7.1□□□□□ -1.27
EPHA4P54764 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
EPHA4P54764 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC7.1□□□□□ -1.27
EPHA4P54764 AL359633.1-201ENST00000421403 310 ntBASIC7.1□□□□□ -1.27
EPHA4P54764 AC127526.2-201ENST00000426436 775 ntBASIC7.1□□□□□ -1.27
EPHA4P54764 AC005534.2-201ENST00000431047 433 ntBASIC7.1□□□□□ -1.27
EPHA4P54764 PGBD4P3-201ENST00000440731 581 ntBASIC7.1□□□□□ -1.27
EPHA4P54764 MTND6P13-201ENST00000443510 523 ntBASIC7.1□□□□□ -1.27
EPHA4P54764 CLDN34-201ENST00000445307 995 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
EPHA4P54764 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC7.1□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 132.7 ms