Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 OR5D2P-201ENST00000524390 911 ntBASIC5.23□□□□□ -1.57
CXCL12P48061 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.23□□□□□ -1.57
CXCL12P48061 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.23□□□□□ -1.57
CXCL12P48061 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.23□□□□□ -1.57
CXCL12P48061 AC091042.1-201ENST00000579213 173 ntBASIC5.23□□□□□ -1.57
CXCL12P48061 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CXCL12P48061 AC104687.2-201ENST00000604442 342 ntBASIC5.23□□□□□ -1.57
CXCL12P48061 MEMO1P5-201ENST00000604810 406 ntBASIC5.23□□□□□ -1.57
CXCL12P48061 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC5.23□□□□□ -1.57
CXCL12P48061 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
CXCL12P48061 AC004158.1-201ENST00000564508 4319 ntBASIC5.23□□□□□ -1.57
CXCL12P48061 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CXCL12P48061 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
CXCL12P48061 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.23□□□□□ -1.57
CXCL12P48061 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.23□□□□□ -1.57
CXCL12P48061 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CXCL12P48061 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.23□□□□□ -1.57
CXCL12P48061 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.23□□□□□ -1.57
CXCL12P48061 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC5.23□□□□□ -1.57
CXCL12P48061 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CXCL12P48061 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.23□□□□□ -1.57
CXCL12P48061 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CXCL12P48061 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
CXCL12P48061 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.22□□□□□ -1.57
CXCL12P48061 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CXCL12P48061 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC5.22□□□□□ -1.57
CXCL12P48061 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CXCL12P48061 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.22□□□□□ -1.57
CXCL12P48061 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CXCL12P48061 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CXCL12P48061 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC5.22□□□□□ -1.57
CXCL12P48061 AC009480.2-201ENST00000422916 432 ntBASIC5.22□□□□□ -1.57
CXCL12P48061 RPL34P20-201ENST00000442771 351 ntBASIC5.22□□□□□ -1.57
CXCL12P48061 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.22□□□□□ -1.57
CXCL12P48061 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.22□□□□□ -1.57
CXCL12P48061 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CXCL12P48061 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC5.22□□□□□ -1.57
CXCL12P48061 GAPDHP62-201ENST00000515313 990 ntBASIC5.22□□□□□ -1.57
CXCL12P48061 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.22□□□□□ -1.57
CXCL12P48061 OR11H3P-201ENST00000554547 982 ntBASIC5.22□□□□□ -1.57
CXCL12P48061 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.22□□□□□ -1.57
CXCL12P48061 MIR4284-201ENST00000578924 81 ntBASIC5.22□□□□□ -1.57
CXCL12P48061 MIR3667-201ENST00000581025 74 ntBASIC5.22□□□□□ -1.57
CXCL12P48061 SS18L2P2-201ENST00000583960 235 ntBASIC5.22□□□□□ -1.57
CXCL12P48061 MIR7703-201ENST00000620784 77 ntBASIC5.22□□□□□ -1.57
CXCL12P48061 AC135068.5-201ENST00000624197 983 ntBASIC5.22□□□□□ -1.57
CXCL12P48061 AC016717.3-201ENST00000624730 554 ntBASIC5.22□□□□□ -1.57
CXCL12P48061 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.22□□□□□ -1.57
CXCL12P48061 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CXCL12P48061 AC104964.3-201ENST00000606115 2860 ntBASIC5.22□□□□□ -1.57
CXCL12P48061 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
CXCL12P48061 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
CXCL12P48061 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CXCL12P48061 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.21□□□□□ -1.57
CXCL12P48061 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.21□□□□□ -1.57
CXCL12P48061 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.21□□□□□ -1.57
CXCL12P48061 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
CXCL12P48061 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.57
CXCL12P48061 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
CXCL12P48061 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CXCL12P48061 MFSD8-216ENST00000641147 4009 ntBASIC5.21□□□□□ -1.58
CXCL12P48061 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CXCL12P48061 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CXCL12P48061 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CXCL12P48061 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CXCL12P48061 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CXCL12P48061 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CXCL12P48061 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CXCL12P48061 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CXCL12P48061 SNORA66-201ENST00000384792 133 ntBASIC5.21□□□□□ -1.58
CXCL12P48061 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.21□□□□□ -1.58
CXCL12P48061 RPL12P43-201ENST00000420608 499 ntBASIC5.21□□□□□ -1.58
CXCL12P48061 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC5.21□□□□□ -1.58
CXCL12P48061 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.21□□□□□ -1.58
CXCL12P48061 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.21□□□□□ -1.58
CXCL12P48061 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.21□□□□□ -1.58
CXCL12P48061 AC012512.1-201ENST00000446594 718 ntBASIC5.21□□□□□ -1.58
CXCL12P48061 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC5.21□□□□□ -1.58
CXCL12P48061 AC006967.1-201ENST00000467608 589 ntBASIC5.21□□□□□ -1.58
CXCL12P48061 IGKV1-32-201ENST00000519290 311 ntBASIC5.21□□□□□ -1.58
CXCL12P48061 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.21□□□□□ -1.58
CXCL12P48061 TOMM20P2-201ENST00000540082 421 ntBASIC5.21□□□□□ -1.58
CXCL12P48061 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
CXCL12P48061 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.21□□□□□ -1.58
CXCL12P48061 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC5.21□□□□□ -1.58
CXCL12P48061 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.21□□□□□ -1.58
CXCL12P48061 AC083809.1-201ENST00000615051 472 ntBASIC5.21□□□□□ -1.58
CXCL12P48061 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.21□□□□□ -1.58
CXCL12P48061 uc_338.7-201ENST00000621834 124 ntBASIC5.21□□□□□ -1.58
CXCL12P48061 AP003400.3-201ENST00000624904 346 ntBASIC5.21□□□□□ -1.58
CXCL12P48061 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC5.21□□□□□ -1.58
CXCL12P48061 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.21□□□□□ -1.58
CXCL12P48061 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.21□□□□□ -1.58
CXCL12P48061 AC099654.11-201ENST00000638857 294 ntBASIC5.21□□□□□ -1.58
CXCL12P48061 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.21□□□□□ -1.58
CXCL12P48061 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CXCL12P48061 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
CXCL12P48061 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CXCL12P48061 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.21□□□□□ -1.58
CXCL12P48061 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms