Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 AC139713.2-214ENST00000642059 1811 ntBASIC6.16□□□□□ -1.42
SCN4AP35499 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.16□□□□□ -1.42
SCN4AP35499 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC6.16□□□□□ -1.42
SCN4AP35499 AC144833.1-201ENST00000567953 4089 ntBASIC6.16□□□□□ -1.42
SCN4AP35499 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SCN4AP35499 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.16□□□□□ -1.42
SCN4AP35499 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SCN4AP35499 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC6.16□□□□□ -1.42
SCN4AP35499 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SCN4AP35499 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
SCN4AP35499 RNA5SP388-201ENST00000362584 119 ntBASIC6.15□□□□□ -1.42
SCN4AP35499 RN7SKP227-201ENST00000364445 330 ntBASIC6.15□□□□□ -1.42
SCN4AP35499 RNA5SP515-201ENST00000364570 118 ntBASIC6.15□□□□□ -1.42
SCN4AP35499 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.15□□□□□ -1.42
SCN4AP35499 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SCN4AP35499 AL356390.1-201ENST00000455684 397 ntBASIC6.15□□□□□ -1.42
SCN4AP35499 AC111000.3-201ENST00000508057 576 ntBASIC6.15□□□□□ -1.42
SCN4AP35499 ARL6IP1P3-201ENST00000524544 560 ntBASIC6.15□□□□□ -1.42
SCN4AP35499 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC6.15□□□□□ -1.42
SCN4AP35499 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.15□□□□□ -1.42
SCN4AP35499 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC6.15□□□□□ -1.42
SCN4AP35499 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC6.15□□□□□ -1.42
SCN4AP35499 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SCN4AP35499 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SCN4AP35499 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.15□□□□□ -1.42
SCN4AP35499 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SCN4AP35499 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
SCN4AP35499 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SCN4AP35499 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.15□□□□□ -1.42
SCN4AP35499 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
SCN4AP35499 AL449283.1-201ENST00000602631 3403 ntBASIC6.15□□□□□ -1.42
SCN4AP35499 IQCB2P-201ENST00000401788 1633 ntBASIC6.15□□□□□ -1.42
SCN4AP35499 AL137100.1-201ENST00000556703 1620 ntBASIC6.15□□□□□ -1.42
SCN4AP35499 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
SCN4AP35499 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
SCN4AP35499 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC6.15□□□□□ -1.43
SCN4AP35499 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
SCN4AP35499 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
SCN4AP35499 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
SCN4AP35499 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC6.15□□□□□ -1.43
SCN4AP35499 SNORA70F-201ENST00000384142 135 ntBASIC6.15□□□□□ -1.43
SCN4AP35499 OR8V1P-201ENST00000395193 873 ntBASIC6.15□□□□□ -1.43
SCN4AP35499 AL049697.2-201ENST00000403708 294 ntBASIC6.15□□□□□ -1.43
SCN4AP35499 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC6.15□□□□□ -1.43
SCN4AP35499 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6.15□□□□□ -1.43
SCN4AP35499 IGHVIII-2-1-201ENST00000518843 291 ntBASIC6.15□□□□□ -1.43
SCN4AP35499 MAL2-201ENST00000522112 573 ntTSL 4 BASIC6.15□□□□□ -1.43
SCN4AP35499 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
SCN4AP35499 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC6.15□□□□□ -1.43
SCN4AP35499 AP001521.2-201ENST00000608772 546 ntBASIC6.15□□□□□ -1.43
SCN4AP35499 AL121873.1-201ENST00000616013 524 ntBASIC6.15□□□□□ -1.43
SCN4AP35499 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC6.15□□□□□ -1.43
SCN4AP35499 SAMMSON-226ENST00000642089 1582 ntBASIC6.15□□□□□ -1.43
SCN4AP35499 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC6.15□□□□□ -1.43
SCN4AP35499 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC6.15□□□□□ -1.43
SCN4AP35499 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.15□□□□□ -1.43
SCN4AP35499 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
SCN4AP35499 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.14□□□□□ -1.43
SCN4AP35499 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC6.14□□□□□ -1.43
SCN4AP35499 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SCN4AP35499 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.14□□□□□ -1.43
SCN4AP35499 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
SCN4AP35499 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SCN4AP35499 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
SCN4AP35499 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC6.14□□□□□ -1.43
SCN4AP35499 EIF2S2P2-201ENST00000447161 982 ntBASIC6.14□□□□□ -1.43
SCN4AP35499 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC6.14□□□□□ -1.43
SCN4AP35499 RPL21P129-201ENST00000491732 478 ntBASIC6.14□□□□□ -1.43
SCN4AP35499 GLUD1P3-202ENST00000508551 200 ntBASIC6.14□□□□□ -1.43
SCN4AP35499 HMGB1P23-201ENST00000518743 568 ntBASIC6.14□□□□□ -1.43
SCN4AP35499 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC6.14□□□□□ -1.43
SCN4AP35499 AP001880.2-201ENST00000538233 448 ntBASIC6.14□□□□□ -1.43
SCN4AP35499 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC6.14□□□□□ -1.43
SCN4AP35499 AC105254.2-201ENST00000603636 436 ntBASIC6.14□□□□□ -1.43
SCN4AP35499 AC008814.1-201ENST00000603797 406 ntBASIC6.14□□□□□ -1.43
SCN4AP35499 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC6.14□□□□□ -1.43
SCN4AP35499 MIR6830-201ENST00000636015 70 ntBASIC6.14□□□□□ -1.43
SCN4AP35499 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
SCN4AP35499 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
SCN4AP35499 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
SCN4AP35499 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SCN4AP35499 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
SCN4AP35499 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.14□□□□□ -1.43
SCN4AP35499 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC6.14□□□□□ -1.43
SCN4AP35499 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC6.14□□□□□ -1.43
SCN4AP35499 SAMMSON-210ENST00000641260 1308 ntBASIC6.14□□□□□ -1.43
SCN4AP35499 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
SCN4AP35499 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
SCN4AP35499 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC6.14□□□□□ -1.43
SCN4AP35499 ALB-214ENST00000509063 1911 ntTSL 5 BASIC6.14□□□□□ -1.43
SCN4AP35499 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
SCN4AP35499 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SCN4AP35499 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC6.14□□□□□ -1.43
SCN4AP35499 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SCN4AP35499 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
SCN4AP35499 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SCN4AP35499 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC6.13□□□□□ -1.43
SCN4AP35499 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.13□□□□□ -1.43
SCN4AP35499 MIR134-201ENST00000385258 73 ntBASIC6.13□□□□□ -1.43
SCN4AP35499 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms