Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
CFTRP13569 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
CFTRP13569 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC8.6□□□□□ -1.03
CFTRP13569 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
CFTRP13569 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
CFTRP13569 RNA5SP388-201ENST00000362584 119 ntBASIC8.6□□□□□ -1.03
CFTRP13569 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
CFTRP13569 AC114755.2-201ENST00000413520 361 ntBASIC8.6□□□□□ -1.03
CFTRP13569 RPS17P2-201ENST00000461663 408 ntBASIC8.6□□□□□ -1.03
CFTRP13569 PSAT1P4-201ENST00000466500 526 ntBASIC8.6□□□□□ -1.03
CFTRP13569 RPS12P31-201ENST00000491419 398 ntBASIC8.6□□□□□ -1.03
CFTRP13569 AC005412.2-201ENST00000492004 341 ntBASIC8.6□□□□□ -1.03
CFTRP13569 AL109766.1-201ENST00000555080 552 ntBASIC8.6□□□□□ -1.03
CFTRP13569 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
CFTRP13569 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC8.6□□□□□ -1.03
CFTRP13569 AC069366.1-201ENST00000583159 838 ntBASIC8.6□□□□□ -1.03
CFTRP13569 AC005191.1-201ENST00000603950 358 ntBASIC8.6□□□□□ -1.03
CFTRP13569 NCLP2-201ENST00000416078 1462 ntBASIC8.6□□□□□ -1.03
CFTRP13569 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
CFTRP13569 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC8.6□□□□□ -1.03
CFTRP13569 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC8.6□□□□□ -1.03
CFTRP13569 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
CFTRP13569 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
CFTRP13569 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
CFTRP13569 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
CFTRP13569 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
CFTRP13569 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
CFTRP13569 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC8.6□□□□□ -1.03
CFTRP13569 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
CFTRP13569 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
CFTRP13569 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC8.59□□□□□ -1.03
CFTRP13569 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
CFTRP13569 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
CFTRP13569 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
CFTRP13569 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
CFTRP13569 MTCO1P15-201ENST00000529569 1526 ntBASIC8.59□□□□□ -1.03
CFTRP13569 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
CFTRP13569 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
CFTRP13569 MAST4-207ENST00000407621 559 ntTSL 2 BASIC8.59□□□□□ -1.03
CFTRP13569 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC8.59□□□□□ -1.03
CFTRP13569 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC8.59□□□□□ -1.03
CFTRP13569 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC8.59□□□□□ -1.03
CFTRP13569 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
CFTRP13569 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC8.59□□□□□ -1.03
CFTRP13569 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC8.59□□□□□ -1.03
CFTRP13569 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC8.59□□□□□ -1.03
CFTRP13569 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC8.59□□□□□ -1.03
CFTRP13569 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
CFTRP13569 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.03
CFTRP13569 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
CFTRP13569 AC104964.3-201ENST00000606115 2860 ntBASIC8.59□□□□□ -1.03
CFTRP13569 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
CFTRP13569 AC100871.1-201ENST00000507871 1456 ntBASIC8.59□□□□□ -1.04
CFTRP13569 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
CFTRP13569 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
CFTRP13569 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
CFTRP13569 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
CFTRP13569 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC8.58□□□□□ -1.04
CFTRP13569 RN7SL441P-201ENST00000492388 296 ntBASIC8.58□□□□□ -1.04
CFTRP13569 AC130364.2-201ENST00000528639 604 ntBASIC8.58□□□□□ -1.04
CFTRP13569 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
CFTRP13569 AC084824.2-201ENST00000548906 345 ntBASIC8.58□□□□□ -1.04
CFTRP13569 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC8.58□□□□□ -1.04
CFTRP13569 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC8.58□□□□□ -1.04
CFTRP13569 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC8.58□□□□□ -1.04
CFTRP13569 IGKV1OR2-9-201ENST00000603957 287 ntBASIC8.58□□□□□ -1.04
CFTRP13569 IGKV1OR2-11-201ENST00000604120 287 ntBASIC8.58□□□□□ -1.04
CFTRP13569 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC8.58□□□□□ -1.04
CFTRP13569 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
CFTRP13569 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
CFTRP13569 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC8.58□□□□□ -1.04
CFTRP13569 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC8.58□□□□□ -1.04
CFTRP13569 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC8.58□□□□□ -1.04
CFTRP13569 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
CFTRP13569 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
CFTRP13569 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
CFTRP13569 GAPDHP49-201ENST00000421421 961 ntBASIC8.57□□□□□ -1.04
CFTRP13569 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
CFTRP13569 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC8.57□□□□□ -1.04
CFTRP13569 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC8.57□□□□□ -1.04
CFTRP13569 IMPA1P1-201ENST00000510718 842 ntBASIC8.57□□□□□ -1.04
CFTRP13569 IGHVIII-2-1-201ENST00000518843 291 ntBASIC8.57□□□□□ -1.04
CFTRP13569 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC8.57□□□□□ -1.04
CFTRP13569 AL020997.2-201ENST00000602607 184 ntBASIC8.57□□□□□ -1.04
CFTRP13569 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
CFTRP13569 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
CFTRP13569 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
CFTRP13569 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
CFTRP13569 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC8.57□□□□□ -1.04
CFTRP13569 AP000756.2-201ENST00000624168 2567 ntBASIC8.57□□□□□ -1.04
CFTRP13569 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
CFTRP13569 NACA-203ENST00000454682 6629 ntTSL 5 BASIC8.57□□□□□ -1.04
CFTRP13569 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
CFTRP13569 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
CFTRP13569 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
CFTRP13569 AC012213.2-201ENST00000562917 4597 ntBASIC8.57□□□□□ -1.04
CFTRP13569 AL645608.4-201ENST00000423619 154 ntBASIC8.57□□□□□ -1.04
CFTRP13569 AC016831.4-201ENST00000438302 307 ntBASIC8.57□□□□□ -1.04
CFTRP13569 AC122718.1-201ENST00000439448 744 ntBASIC8.57□□□□□ -1.04
CFTRP13569 TAAR4P-201ENST00000454843 1039 ntBASIC8.57□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms